BLASTX nr result

ID: Coptis21_contig00007122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007122
         (847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27078.3| unnamed protein product [Vitis vinifera]              109   7e-22
ref|XP_003631189.1| PREDICTED: uncharacterized protein LOC100259...    82   2e-13
ref|XP_002524393.1| conserved hypothetical protein [Ricinus comm...    72   2e-10
ref|XP_002315964.1| predicted protein [Populus trichocarpa] gi|2...    67   4e-09
ref|XP_002875269.1| hypothetical protein ARALYDRAFT_904734 [Arab...    65   3e-08

>emb|CBI27078.3| unnamed protein product [Vitis vinifera]
          Length = 576

 Score =  109 bits (273), Expect = 7e-22
 Identities = 75/209 (35%), Positives = 113/209 (54%), Gaps = 7/209 (3%)
 Frame = +2

Query: 242 PILRPCYIFSFINSSTPFLKFSNIKQRVVSLSASVIDKELQVSWLTPERNKDEEEYGGWA 421
           PILR   I    +SS+PF+     +   + +S+SV +   +V+W++PERN  ++ YGGWA
Sbjct: 18  PILRS-RIVPIFSSSSPFINSHRFRNPRLCISSSVSETSFEVTWVSPERNASDD-YGGWA 75

Query: 422 VVEAEXXXXXXXGFLSFLLMGAGVSAVILIAAIAYSSFTRKGFKLKLNGPL-NVFQLFLK 598
           VVE+            F ++  G S  IL++AIAY S +RKGF+L+ N P+ ++ ++F++
Sbjct: 76  VVESPCRKKKKGSSALFCVV-TGTSIAILLSAIAYFSLSRKGFRLQFNKPMHSIHEIFVR 134

Query: 599 PADSVDNQSGCIESSTS------IEMTPDYASEEKVEISASESVKKPLKRVIITVAADST 760
                  QS  + S+ S      +E   + AS E  E  AS S  K +K V+I VAADST
Sbjct: 135 TKTEA-GQSNTVYSNASDVDTNIVEAGTESASNEIDEDVASAS--KKVKHVLIPVAADST 191

Query: 761 XXXXXXXXXXXXXXXDDVKENDLCTRREY 847
                          DDV  ++LCT+REY
Sbjct: 192 QQEALLVLKKLKIIEDDVSADELCTKREY 220


>ref|XP_003631189.1| PREDICTED: uncharacterized protein LOC100259365 [Vitis vinifera]
          Length = 547

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 7/209 (3%)
 Frame = +2

Query: 242 PILRPCYIFSFINSSTPFLKFSNIKQRVVSLSASVIDKELQVSWLTPERNKDEEEYGGWA 421
           PILR   I    +SS+PF+     +   + +S+SV +   +V+W++PERN  ++ YGGWA
Sbjct: 18  PILRS-RIVPIFSSSSPFINSHRFRNPRLCISSSVSETSFEVTWVSPERNASDD-YGGWA 75

Query: 422 VVEAEXXXXXXXGFLSFLLMGAGVSAVILIAAIAYSSFTRKGFKLKLNGPLN-VFQLFLK 598
           VVE+                                   +KGF+L+ N P++ + ++F++
Sbjct: 76  VVESPCRKK------------------------------KKGFRLQFNKPMHSIHEIFVR 105

Query: 599 PADSVDNQSGCIESSTS------IEMTPDYASEEKVEISASESVKKPLKRVIITVAADST 760
                  QS  + S+ S      +E   + AS E  E  AS S  K +K V+I VAADST
Sbjct: 106 TKTEA-GQSNTVYSNASDVDTNIVEAGTESASNEIDEDVASAS--KKVKHVLIPVAADST 162

Query: 761 XXXXXXXXXXXXXXXDDVKENDLCTRREY 847
                          DDV  ++LCT+REY
Sbjct: 163 QQEALLVLKKLKIIEDDVSADELCTKREY 191


>ref|XP_002524393.1| conserved hypothetical protein [Ricinus communis]
           gi|223536354|gb|EEF38004.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 564

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 61/200 (30%), Positives = 88/200 (44%), Gaps = 6/200 (3%)
 Frame = +2

Query: 266 FSFINSSTPFLKFSNIKQRVVSLSASVIDKELQV---SWLTPERNKDEEE--YGGWAVVE 430
           +SF+ S  P         R++ LSAS+ D        SW +P  +  + +  Y GWAV+E
Sbjct: 36  YSFLRSKNP---------RLLRLSASLTDNHPDTTTSSWFSPASSTFDVDDGYNGWAVLE 86

Query: 431 AEXXXXXXXGF-LSFLLMGAGVSAVILIAAIAYSSFTRKGFKLKLNGPLNVFQLFLKPAD 607
                       LS +L+G G   V ++AA AY SF+RKGF LK              + 
Sbjct: 87  HPSPPRSHKNEGLSAILIGGGSCVVAMVAAAAYFSFSRKGFNLKFQ------------SQ 134

Query: 608 SVDNQSGCIESSTSIEMTPDYASEEKVEISASESVKKPLKRVIITVAADSTXXXXXXXXX 787
           S    S    +S  IE+  ++  E   E  A  S ++ L+R  + V  DS          
Sbjct: 135 SHGITSPIESTSDRIEVVSEFIPEAPGEALAPASSQR-LERDKVAVLVDSNQLEALSVLK 193

Query: 788 XXXXXXDDVKENDLCTRREY 847
                 DDV+ ++LCTRREY
Sbjct: 194 KLKIIEDDVRADELCTRREY 213


>ref|XP_002315964.1| predicted protein [Populus trichocarpa] gi|222865004|gb|EEF02135.1|
           predicted protein [Populus trichocarpa]
          Length = 566

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 3/175 (1%)
 Frame = +2

Query: 332 LSASVIDKELQVSWLTPERNKDEEEYGGWAVVEAEXXXXXXXGFLSFLLMGAGVSAVI-- 505
           LSAS+ D     SW +P    D++ + GWA  E+          L  +++ AG+   +  
Sbjct: 49  LSASLTDTHPHFSWSSPPPPTDDDHFRGWAFPESPPQSNNNKKGLPKIVIIAGIGTCVTA 108

Query: 506 LIAAIAYSSFTRKGFKLKLNGPLNV-FQLFLKPADSVDNQSGCIESSTSIEMTPDYASEE 682
           L+AAIAY   +RKGF+ + + P +    ++ K   ++ +++    S  ++E   D     
Sbjct: 109 LLAAIAYFLLSRKGFEFRFHSPSSTETTVYDKIETNMSDENAAAASDAAMEGVSD----- 163

Query: 683 KVEISASESVKKPLKRVIITVAADSTXXXXXXXXXXXXXXXDDVKENDLCTRREY 847
               +     K+ L+RV ++V  DS                DDV  ++LCTRREY
Sbjct: 164 ---ATGITLHKEKLERVKVSVYVDSNQLETLLALKKLKIIEDDVAADELCTRREY 215


>ref|XP_002875269.1| hypothetical protein ARALYDRAFT_904734 [Arabidopsis lyrata subsp.
           lyrata] gi|297321107|gb|EFH51528.1| hypothetical protein
           ARALYDRAFT_904734 [Arabidopsis lyrata subsp. lyrata]
          Length = 558

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 8/168 (4%)
 Frame = +2

Query: 368 SWLTPERNKDEEEYGGWAVVEAEXXXXXXXG----FLSFLLMGAGVSAVILIAAIAYSSF 535
           SW++      +E+YGGWA+VE E            + + ++ G G S  +++A IAY S 
Sbjct: 52  SWVS---QASKEKYGGWALVEDEEPPSPHSKTKKKWRNVVITGVGSSLAVVLATIAYFSI 108

Query: 536 TRKGFKLKLNGPLNVFQLFLKPADSVDNQSGCIESSTSIEM----TPDYASEEKVEISAS 703
           +RKGF+   + PL+   + L    + ++++   + + S+      + DY S+     S  
Sbjct: 109 SRKGFRFCFSNPLHYQNVELDQNANEESETLLNDENNSVSEANSDSVDYVSDTVDTASTG 168

Query: 704 ESVKKPLKRVIITVAADSTXXXXXXXXXXXXXXXDDVKENDLCTRREY 847
           ++      RV I VA D+                DDV  ++LCTRREY
Sbjct: 169 KT-----HRVTIPVAVDAAQQEAIAVLKKLKIIEDDVVADELCTRREY 211


Top