BLASTX nr result

ID: Coptis21_contig00007118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007118
         (1746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281533.1| PREDICTED: WD40 repeat-containing protein SM...   962   0.0  
ref|XP_003531308.1| PREDICTED: WD40 repeat-containing protein SM...   945   0.0  
ref|XP_003525021.1| PREDICTED: WD40 repeat-containing protein SM...   944   0.0  
ref|NP_001234868.1| WD-40 repeat protein [Solanum lycopersicum] ...   942   0.0  
ref|XP_004138672.1| PREDICTED: WD40 repeat-containing protein SM...   942   0.0  

>ref|XP_002281533.1| PREDICTED: WD40 repeat-containing protein SMU1 [Vitis vinifera]
            gi|297733734|emb|CBI14981.3| unnamed protein product
            [Vitis vinifera]
          Length = 514

 Score =  962 bits (2488), Expect = 0.0
 Identities = 473/511 (92%), Positives = 488/511 (95%)
 Frame = +1

Query: 22   STLEIEARDVIKIVLQFCKENSLNQTFQTLQSECQVSLNTVDSLETFAADINSGRWDAIL 201
            STLEIEARDVIKIVLQFCKENSL+QTFQTLQSECQVSLNTVDSLETF ADINSGRWDAIL
Sbjct: 3    STLEIEARDVIKIVLQFCKENSLHQTFQTLQSECQVSLNTVDSLETFIADINSGRWDAIL 62

Query: 202  PQVAQLKLPRKKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL 381
            PQVAQLKLPRKKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL
Sbjct: 63   PQVAQLKLPRKKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL 122

Query: 382  LVRTYFDPNEAYQDATKEKXXXXXXXXXXXEVTVVPPSRLMALIGQALKWQQHQGLLPPG 561
            LVRTYFDP+EAYQD+TKEK           EV+VVPPSRLMALIGQALKWQQHQGLLPPG
Sbjct: 123  LVRTYFDPHEAYQDSTKEKRRAQIAQALAAEVSVVPPSRLMALIGQALKWQQHQGLLPPG 182

Query: 562  TQFDLFRGTAAMKQDEDDMYPTTLGHTIKFAKKSHPESARFSPDGQFLVSCSVDGFIEVW 741
            TQFDLFRGTAAMKQD DDMYPTTLGHTIKF  KSH E ARFSPDGQFLVSCSVDGFIEVW
Sbjct: 183  TQFDLFRGTAAMKQDVDDMYPTTLGHTIKFGTKSHAEYARFSPDGQFLVSCSVDGFIEVW 242

Query: 742  DHISGKLKKDLQYQADDAFMMHDDAVLCVDFSKDSEMLASGSQDGKIKVWRIRTGQCLRR 921
            DHISGKLKKDLQYQAD+ FMMHDDAVLCVDFS+DSEMLASGSQDGKIKVWRIRTGQCLRR
Sbjct: 243  DHISGKLKKDLQYQADETFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLRR 302

Query: 922  LERAHSQGVTSLVFSRDGTQLLSASFDSTARIHGLKSGKLLKEFRGHNSYVNDAIFTNDG 1101
            LERAHSQGVTSLVFSRDG+Q+LSASFDSTARIHGLKSGKLLKEFRGH+SYVNDAIFTNDG
Sbjct: 303  LERAHSQGVTSLVFSRDGSQILSASFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDG 362

Query: 1102 ARVITASSDCTVKVWDTKTTDCLQTFKPPPPLRGGDASVNSVHLFPKNPEHIIVCNKTSS 1281
             RV+TASSDCTVKVWD KTTDCLQTFKPPPPLRGGDASVN VHLFPKN +HIIVCN+TSS
Sbjct: 363  GRVVTASSDCTVKVWDVKTTDCLQTFKPPPPLRGGDASVNGVHLFPKNTDHIIVCNRTSS 422

Query: 1282 IYLMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNVYCFSYQSGKLENLIK 1461
            IYLMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRN+YCFSYQSGKLE+L+K
Sbjct: 423  IYLMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNIYCFSYQSGKLEHLMK 482

Query: 1462 VHEKDVIGVTHHPHRNLVATYSEDCTMKLWK 1554
            VHEKDVIGVTHHPHRNLVATYSED TMKLWK
Sbjct: 483  VHEKDVIGVTHHPHRNLVATYSEDSTMKLWK 513


>ref|XP_003531308.1| PREDICTED: WD40 repeat-containing protein SMU1-like [Glycine max]
          Length = 513

 Score =  945 bits (2443), Expect = 0.0
 Identities = 460/512 (89%), Positives = 483/512 (94%)
 Frame = +1

Query: 19   MSTLEIEARDVIKIVLQFCKENSLNQTFQTLQSECQVSLNTVDSLETFAADINSGRWDAI 198
            MSTLEIEARDVIKIVLQFCKENSL+QTFQ LQ+ECQVSLNTVDS+ETF ADINSGRWDAI
Sbjct: 1    MSTLEIEARDVIKIVLQFCKENSLHQTFQMLQNECQVSLNTVDSIETFVADINSGRWDAI 60

Query: 199  LPQVAQLKLPRKKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEH 378
            LPQV+QLKLPR KLEDLYEQIVLEMIELRELDTARAILRQTQ MGVMKQEQPERYLRLEH
Sbjct: 61   LPQVSQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRLEH 120

Query: 379  LLVRTYFDPNEAYQDATKEKXXXXXXXXXXXEVTVVPPSRLMALIGQALKWQQHQGLLPP 558
            LLVRTYFDPNEAYQD+TKEK           EVTVVPPSRLMALIGQALKWQQHQGLLPP
Sbjct: 121  LLVRTYFDPNEAYQDSTKEKRRAQIAQALAAEVTVVPPSRLMALIGQALKWQQHQGLLPP 180

Query: 559  GTQFDLFRGTAAMKQDEDDMYPTTLGHTIKFAKKSHPESARFSPDGQFLVSCSVDGFIEV 738
            GTQFDLFRGTAAMKQD DDMYPTTL HTIKF  KSH E A FSPDGQFLVSCSVDGFIEV
Sbjct: 181  GTQFDLFRGTAAMKQDVDDMYPTTLSHTIKFGTKSHAECACFSPDGQFLVSCSVDGFIEV 240

Query: 739  WDHISGKLKKDLQYQADDAFMMHDDAVLCVDFSKDSEMLASGSQDGKIKVWRIRTGQCLR 918
            WD+ISGKLKKDLQYQAD+ FMMHDDAVLCVDFS+DSEMLASGSQDGKIKVWRIRTGQCLR
Sbjct: 241  WDYISGKLKKDLQYQADEVFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLR 300

Query: 919  RLERAHSQGVTSLVFSRDGTQLLSASFDSTARIHGLKSGKLLKEFRGHNSYVNDAIFTND 1098
            RLERAHSQGVTS+ FSRDG+QLLS SFDSTARIHGLKSGK+LKEFRGH SYVNDAIFTND
Sbjct: 301  RLERAHSQGVTSVSFSRDGSQLLSTSFDSTARIHGLKSGKMLKEFRGHTSYVNDAIFTND 360

Query: 1099 GARVITASSDCTVKVWDTKTTDCLQTFKPPPPLRGGDASVNSVHLFPKNPEHIIVCNKTS 1278
            G+RVITASSDCT+KVWD KTTDC+QTFKPPPPLRGGDASVNSVH+FPKN +HI+VCNKTS
Sbjct: 361  GSRVITASSDCTIKVWDVKTTDCIQTFKPPPPLRGGDASVNSVHIFPKNTDHIVVCNKTS 420

Query: 1279 SIYLMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNVYCFSYQSGKLENLI 1458
            SIY+MTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRN+YCFSY SGKLE+L+
Sbjct: 421  SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNIYCFSYLSGKLEHLM 480

Query: 1459 KVHEKDVIGVTHHPHRNLVATYSEDCTMKLWK 1554
            KVHEK+VIGVTHHPHRNLVAT+SEDCTMKLWK
Sbjct: 481  KVHEKEVIGVTHHPHRNLVATFSEDCTMKLWK 512


>ref|XP_003525021.1| PREDICTED: WD40 repeat-containing protein SMU1-like [Glycine max]
          Length = 513

 Score =  944 bits (2439), Expect = 0.0
 Identities = 459/512 (89%), Positives = 483/512 (94%)
 Frame = +1

Query: 19   MSTLEIEARDVIKIVLQFCKENSLNQTFQTLQSECQVSLNTVDSLETFAADINSGRWDAI 198
            MSTLEIEARDVIKIVLQFCKENSL+QTFQ LQ+ECQVSLNTVDS+ETF ADINSGRWDAI
Sbjct: 1    MSTLEIEARDVIKIVLQFCKENSLHQTFQMLQNECQVSLNTVDSIETFVADINSGRWDAI 60

Query: 199  LPQVAQLKLPRKKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEH 378
            LPQV+QLKLPR KLEDLYEQIVLEMIELRELDTARAILRQTQ MGVMKQEQPERYLRL+H
Sbjct: 61   LPQVSQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRLDH 120

Query: 379  LLVRTYFDPNEAYQDATKEKXXXXXXXXXXXEVTVVPPSRLMALIGQALKWQQHQGLLPP 558
            LLVRTYFDPNEAYQD+TKEK           EVTVVPPSRLMALIGQALKWQQHQGLLPP
Sbjct: 121  LLVRTYFDPNEAYQDSTKEKRRAQIAQAIAAEVTVVPPSRLMALIGQALKWQQHQGLLPP 180

Query: 559  GTQFDLFRGTAAMKQDEDDMYPTTLGHTIKFAKKSHPESARFSPDGQFLVSCSVDGFIEV 738
            GTQFDLFRGTAAMKQD DDMYPTTL HTIKF  KSH E A FSPDGQFLVSCSVDGFIEV
Sbjct: 181  GTQFDLFRGTAAMKQDVDDMYPTTLSHTIKFGTKSHAECACFSPDGQFLVSCSVDGFIEV 240

Query: 739  WDHISGKLKKDLQYQADDAFMMHDDAVLCVDFSKDSEMLASGSQDGKIKVWRIRTGQCLR 918
            WD+ISGKLKKDLQYQAD+ FMMHDDAVLCVDFS+DSEMLASGSQDGKIKVWRIRTGQCLR
Sbjct: 241  WDYISGKLKKDLQYQADEVFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLR 300

Query: 919  RLERAHSQGVTSLVFSRDGTQLLSASFDSTARIHGLKSGKLLKEFRGHNSYVNDAIFTND 1098
            RLERAHSQGVTS+ FSRDG+QLLS SFDSTARIHGLKSGK+LKEFRGH SYVNDAIFTND
Sbjct: 301  RLERAHSQGVTSVSFSRDGSQLLSTSFDSTARIHGLKSGKMLKEFRGHTSYVNDAIFTND 360

Query: 1099 GARVITASSDCTVKVWDTKTTDCLQTFKPPPPLRGGDASVNSVHLFPKNPEHIIVCNKTS 1278
            G+RVITASSDCT+KVWD KTTDC+QTFKPPPPLRGGDASVNSVH+FPKN +HI+VCNKTS
Sbjct: 361  GSRVITASSDCTIKVWDVKTTDCIQTFKPPPPLRGGDASVNSVHIFPKNTDHIVVCNKTS 420

Query: 1279 SIYLMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNVYCFSYQSGKLENLI 1458
            SIY+MTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRN+YCFSYQSGKLE+L+
Sbjct: 421  SIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNMYCFSYQSGKLEHLM 480

Query: 1459 KVHEKDVIGVTHHPHRNLVATYSEDCTMKLWK 1554
            KVHEK+VIGVTHHPHRNLVAT+SEDCTMK WK
Sbjct: 481  KVHEKEVIGVTHHPHRNLVATFSEDCTMKSWK 512


>ref|NP_001234868.1| WD-40 repeat protein [Solanum lycopersicum]
            gi|14031063|gb|AAK52092.1| WD-40 repeat protein [Solanum
            lycopersicum]
          Length = 514

 Score =  942 bits (2435), Expect = 0.0
 Identities = 461/511 (90%), Positives = 484/511 (94%)
 Frame = +1

Query: 22   STLEIEARDVIKIVLQFCKENSLNQTFQTLQSECQVSLNTVDSLETFAADINSGRWDAIL 201
            STLEIEARDVIKIVLQFCKENSL+Q+FQTLQ+ECQVSLNTVDSLETF ADINSGRWDA+L
Sbjct: 3    STLEIEARDVIKIVLQFCKENSLHQSFQTLQNECQVSLNTVDSLETFIADINSGRWDAVL 62

Query: 202  PQVAQLKLPRKKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL 381
            PQVAQLKLPRK LEDLYEQIVLEMIELRE+DTARAILRQT  MGVMKQEQPERYLRLEHL
Sbjct: 63   PQVAQLKLPRKILEDLYEQIVLEMIELREMDTARAILRQTNVMGVMKQEQPERYLRLEHL 122

Query: 382  LVRTYFDPNEAYQDATKEKXXXXXXXXXXXEVTVVPPSRLMALIGQALKWQQHQGLLPPG 561
            LVRTYFDP+EAY D+TKEK           EV+VVPPSRLMALIGQALKWQQHQGLLPPG
Sbjct: 123  LVRTYFDPHEAYNDSTKEKRRAQISQALSAEVSVVPPSRLMALIGQALKWQQHQGLLPPG 182

Query: 562  TQFDLFRGTAAMKQDEDDMYPTTLGHTIKFAKKSHPESARFSPDGQFLVSCSVDGFIEVW 741
            TQFDLFRGTAAMKQDE+DMYPTTLGHTIKF KKSHPE +RFSPDGQFLVSCSVDGFIEVW
Sbjct: 183  TQFDLFRGTAAMKQDEEDMYPTTLGHTIKFPKKSHPECSRFSPDGQFLVSCSVDGFIEVW 242

Query: 742  DHISGKLKKDLQYQADDAFMMHDDAVLCVDFSKDSEMLASGSQDGKIKVWRIRTGQCLRR 921
            DHISGKLKKDLQYQAD+ FMMHDDAVLCVDFS+DSEMLASGSQDGKIKVWRIRTGQCLRR
Sbjct: 243  DHISGKLKKDLQYQADETFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLRR 302

Query: 922  LERAHSQGVTSLVFSRDGTQLLSASFDSTARIHGLKSGKLLKEFRGHNSYVNDAIFTNDG 1101
            LERAHSQGVTSLVFSRDGTQ+LS SFDSTARIHGLKSGKLLKEFRGH+SYVNDAIFT DG
Sbjct: 303  LERAHSQGVTSLVFSRDGTQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTFDG 362

Query: 1102 ARVITASSDCTVKVWDTKTTDCLQTFKPPPPLRGGDASVNSVHLFPKNPEHIIVCNKTSS 1281
            +RVITASSD +VKVWD KTT+CLQTF+PPPPLRGGDASVNSVHLFPKN EHIIVCNKTSS
Sbjct: 363  SRVITASSDGSVKVWDAKTTECLQTFRPPPPLRGGDASVNSVHLFPKNNEHIIVCNKTSS 422

Query: 1282 IYLMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNVYCFSYQSGKLENLIK 1461
            IYLMTLQGQVVKSFSSGKREGGDFVAAC+SPKGEWIYCVGEDRN+YCFSYQS KLE+L+K
Sbjct: 423  IYLMTLQGQVVKSFSSGKREGGDFVAACLSPKGEWIYCVGEDRNLYCFSYQSNKLEHLMK 482

Query: 1462 VHEKDVIGVTHHPHRNLVATYSEDCTMKLWK 1554
            VHEKDVIG+THHPH NLVATY EDCTMKLWK
Sbjct: 483  VHEKDVIGITHHPHINLVATYGEDCTMKLWK 513


>ref|XP_004138672.1| PREDICTED: WD40 repeat-containing protein SMU1-like [Cucumis sativus]
          Length = 513

 Score =  942 bits (2434), Expect = 0.0
 Identities = 458/512 (89%), Positives = 484/512 (94%)
 Frame = +1

Query: 19   MSTLEIEARDVIKIVLQFCKENSLNQTFQTLQSECQVSLNTVDSLETFAADINSGRWDAI 198
            MSTLEIEARDVIKIVLQFCKENSL+QTFQTLQ+ECQVSLNTVDS+ETF ADINSGRWDAI
Sbjct: 1    MSTLEIEARDVIKIVLQFCKENSLHQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAI 60

Query: 199  LPQVAQLKLPRKKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEH 378
            LPQV+QLKLPR KLEDLYEQIVLEMIELRELDTARAILRQTQ MGVMKQEQPERYLRLEH
Sbjct: 61   LPQVSQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRLEH 120

Query: 379  LLVRTYFDPNEAYQDATKEKXXXXXXXXXXXEVTVVPPSRLMALIGQALKWQQHQGLLPP 558
            LLVRTYFDPNEAYQD+TKEK           EVTVV PSRLMALIGQALKWQQHQGLLPP
Sbjct: 121  LLVRTYFDPNEAYQDSTKEKRRAQIAQALAAEVTVVAPSRLMALIGQALKWQQHQGLLPP 180

Query: 559  GTQFDLFRGTAAMKQDEDDMYPTTLGHTIKFAKKSHPESARFSPDGQFLVSCSVDGFIEV 738
            GTQFDLFRGTAAMKQD +D+YPTTL HTIKF  KSH E ARFSPDGQFLVSCSVDGFIEV
Sbjct: 181  GTQFDLFRGTAAMKQDVEDVYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSVDGFIEV 240

Query: 739  WDHISGKLKKDLQYQADDAFMMHDDAVLCVDFSKDSEMLASGSQDGKIKVWRIRTGQCLR 918
            WD+ISGKLKKDLQYQAD+ FMMHDD VLCVDFS+DSEM+ASGSQDGKIKVWRIRTGQCLR
Sbjct: 241  WDYISGKLKKDLQYQADETFMMHDDPVLCVDFSRDSEMIASGSQDGKIKVWRIRTGQCLR 300

Query: 919  RLERAHSQGVTSLVFSRDGTQLLSASFDSTARIHGLKSGKLLKEFRGHNSYVNDAIFTND 1098
            RLERAHSQGVTS+VFSRDGTQLLS SFD+TARIHGLKSGKLLKEFRGH+SYVNDA+FTND
Sbjct: 301  RLERAHSQGVTSVVFSRDGTQLLSTSFDTTARIHGLKSGKLLKEFRGHSSYVNDAVFTND 360

Query: 1099 GARVITASSDCTVKVWDTKTTDCLQTFKPPPPLRGGDASVNSVHLFPKNPEHIIVCNKTS 1278
            GARVITASSDCTVKVWD KTTDCL TFKPPPPLRGGDASVNSVH+FPKN +HI+VCNKTS
Sbjct: 361  GARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGGDASVNSVHIFPKNADHIVVCNKTS 420

Query: 1279 SIYLMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNVYCFSYQSGKLENLI 1458
            SIY+MTLQGQVVKSFSSGKREGGDFVAAC+SPKGEWIYC+GEDRN+YCFS+QSGKLE+L+
Sbjct: 421  SIYIMTLQGQVVKSFSSGKREGGDFVAACLSPKGEWIYCIGEDRNMYCFSHQSGKLEHLM 480

Query: 1459 KVHEKDVIGVTHHPHRNLVATYSEDCTMKLWK 1554
            KVHEKDVIGV+HHPHRNLVATYSED TMKLWK
Sbjct: 481  KVHEKDVIGVSHHPHRNLVATYSEDSTMKLWK 512


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