BLASTX nr result

ID: Coptis21_contig00007106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007106
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    68   9e-10
emb|CBI16498.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    67   1e-09
ref|XP_004142160.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    63   3e-08
ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    62   5e-08

>ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
           vinifera]
          Length = 622

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
 Frame = -1

Query: 309 MRTAWAD-ITNSAAENTAAGAGSSANEGVGNTSRPARSSYVPPHLRNRPPSSD 154
           MRT+WAD + NS ++N  +G+  ++  G G  SR  RSSYVPPHLRNRPPSSD
Sbjct: 1   MRTSWADSVANSTSDNLVSGSSDNSGFGAGAPSRSGRSSYVPPHLRNRPPSSD 53


>emb|CBI16498.3| unnamed protein product [Vitis vinifera]
          Length = 389

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/69 (50%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
 Frame = -1

Query: 309 MRTAWAD-ITNSAAENTAAGAGSSANEGVGNTSRPARSSYVPPHLRNRPPSSDXXXXXXX 133
           MR++WAD + NSAAEN AAG  SSA+ GV   ++P R +Y+PPHLRN  PSS+       
Sbjct: 1   MRSSWADSVVNSAAENVAAG--SSASNGVATAAKPTRGAYIPPHLRNLTPSSEPPAPAYS 58

Query: 132 XXXXGNDRS 106
                NDRS
Sbjct: 59  GPSSANDRS 67


>ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37 [Vitis vinifera]
           gi|147854540|emb|CAN78578.1| hypothetical protein
           VITISV_013679 [Vitis vinifera]
          Length = 612

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/69 (50%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
 Frame = -1

Query: 309 MRTAWAD-ITNSAAENTAAGAGSSANEGVGNTSRPARSSYVPPHLRNRPPSSDXXXXXXX 133
           MR++WAD + NSAAEN AAG  SSA+ GV   ++P R +Y+PPHLRN  PSS+       
Sbjct: 1   MRSSWADSVVNSAAENVAAG--SSASNGVATAAKPTRGAYIPPHLRNLTPSSEPPAPAYS 58

Query: 132 XXXXGNDRS 106
                NDRS
Sbjct: 59  GPSSANDRS 67


>ref|XP_004142160.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Cucumis
           sativus]
          Length = 625

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/69 (52%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
 Frame = -1

Query: 309 MRTAWADIT-NSAAENTAAGAGSSANEGVGNTSRPARSSYVPPHLRNRPPSSDXXXXXXX 133
           MRT+WAD+  +SAAEN AAG  S+ N   G T+ P RS+YVPPHLRNR   +D       
Sbjct: 1   MRTSWADLAASSAAENVAAG--SANNCSAGTTTAPGRSAYVPPHLRNRTAPADLPAAANS 58

Query: 132 XXXXGNDRS 106
               GNDRS
Sbjct: 59  GPAVGNDRS 67


>ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine
           max]
          Length = 619

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
 Frame = -1

Query: 309 MRTAWADIT-NSAAENTAAGAGSSA-NEGVGNTSRPARSSYVPPHLRNRPPSSD 154
           MRT+WAD+  NSAAEN  AG GSSA N G G+T  P R  YVPPHLRNR P+++
Sbjct: 1   MRTSWADLAANSAAEN--AGPGSSADNVGTGSTLAPTRPVYVPPHLRNRQPAAE 52


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