BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007103
         (1646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methy...   757   0.0  
ref|XP_002300381.1| predicted protein [Populus trichocarpa] gi|2...   739   0.0  
ref|XP_003617839.1| Ribosomal RNA small subunit methyltransferas...   736   0.0  
ref|XP_003519634.1| PREDICTED: ribosomal RNA small subunit methy...   733   0.0  
ref|XP_002522772.1| ribosomal RNA small subunit methyltransferas...   721   0.0  

>ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methyltransferase B [Vitis
            vinifera] gi|296089930|emb|CBI39749.3| unnamed protein
            product [Vitis vinifera]
          Length = 525

 Score =  757 bits (1955), Expect = 0.0
 Identities = 387/510 (75%), Positives = 427/510 (83%)
 Frame = +1

Query: 1    LHFHFSNISLFSDFPKTPFSTWKSRTIQAQKQGLEKTTTPRPNKLNLQVSPHRAVSAVRL 180
            L    S+    S  P     T  +  I  +  G  +    R   +NL++SPHRAVSAVRL
Sbjct: 9    LRIRCSDARRTSSKPLKVAKTRPNTAIPTRSTGTRRNAN-RTYGVNLEISPHRAVSAVRL 67

Query: 181  MRIEYGGAFADLLNTKGKGSGANEMGYVERTLGFRTXXXXXXXXXXVTDIVGGTIRWRRY 360
            MRIE GGAFADLLN +GKGSG NEMGYVERTLGFRT          VTDIVGG+IRWRRY
Sbjct: 68   MRIELGGAFADLLNERGKGSGDNEMGYVERTLGFRTRDLDDRDLRLVTDIVGGSIRWRRY 127

Query: 361  LDHLIVALCHDERAFRSMEPLLLQILRIGFYEILKLDMPPYAVVDENVTLAKVALRPGAG 540
            LDHLIV+LCHD + FRSMEPLLLQILRIGFYEI+ LDMPPYAVVDENV LAKVALRPGAG
Sbjct: 128  LDHLIVSLCHDSKTFRSMEPLLLQILRIGFYEIVNLDMPPYAVVDENVRLAKVALRPGAG 187

Query: 541  NMVNGILRRLVFLKENNSLPLPKVEGNDRMQARALATLYSHPVWMVRRWIKYLGQEEAKR 720
            NMVN ILR+LV LKE NSLPLPK+EG+DR QARALATLYSHPVWMVRRW KYLGQEEA +
Sbjct: 188  NMVNAILRKLVLLKEKNSLPLPKLEGDDRAQARALATLYSHPVWMVRRWTKYLGQEEAIK 247

Query: 721  LMAWNNCDPSFSLRANIAKGFSRADLVKRLETLKVPHELSRNLDDFVRITTGMQNVIQAG 900
            LM WNN +PSFSLRAN  KGF+RADLV RL+ LKVPHELS +LD+FVRI TGMQ VIQA 
Sbjct: 248  LMMWNNSEPSFSLRANSGKGFTRADLVMRLKMLKVPHELSPHLDNFVRIRTGMQIVIQAQ 307

Query: 901  LLKDGLCSVQDESTGLVVSVVDPQPGESIIDCCAAPGGKTLFMASRLRGRGMVYAVDINE 1080
            LLK+GLCSVQDES GLVVSVVDPQPGESIIDCCAAPGGKT+FMAS L G+GMV+A+DIN+
Sbjct: 308  LLKEGLCSVQDESAGLVVSVVDPQPGESIIDCCAAPGGKTIFMASCLSGQGMVHAIDINK 367

Query: 1081 GRLRVLKETAKLHEVDVVVSTVHADLRIFAENNALKSDKVLLDAPCSGLGVLSKRADLRW 1260
            GRLR++KETAKL  VD V++TVHADL  FA+NN +KSDKVLLDAPCSGLGVLSKRADLRW
Sbjct: 368  GRLRIVKETAKLLLVDDVITTVHADLCTFAKNNPVKSDKVLLDAPCSGLGVLSKRADLRW 427

Query: 1261 NRKLEDMEQLKSLQDELLDAASKLVKPGGVLVYSTCSIDPEENEERVAAFLQRQPEFHMD 1440
            NR LEDMEQLK+LQDELLDAA+ LVKPGGVLVYSTCSIDPEENEERVAAFLQR PEF +D
Sbjct: 428  NRSLEDMEQLKNLQDELLDAAAILVKPGGVLVYSTCSIDPEENEERVAAFLQRHPEFSID 487

Query: 1441 SAAKYVPSSFVTETGFFFSNPVEHALDGSF 1530
               +YVPS FVTE GF+FSNPV+HALDG+F
Sbjct: 488  PVGRYVPSDFVTEGGFYFSNPVKHALDGAF 517


>ref|XP_002300381.1| predicted protein [Populus trichocarpa] gi|222847639|gb|EEE85186.1|
            predicted protein [Populus trichocarpa]
          Length = 527

 Score =  739 bits (1907), Expect = 0.0
 Identities = 373/496 (75%), Positives = 425/496 (85%)
 Frame = +1

Query: 43   PKTPFSTWKSRTIQAQKQGLEKTTTPRPNKLNLQVSPHRAVSAVRLMRIEYGGAFADLLN 222
            PKT  ST +  T Q+ +  L KT      KLNLQVSPHRAVSAVRLMRIE GGAFADLLN
Sbjct: 30   PKTSLSTRRKAT-QSPQSPLRKT-----QKLNLQVSPHRAVSAVRLMRIEMGGAFADLLN 83

Query: 223  TKGKGSGANEMGYVERTLGFRTXXXXXXXXXXVTDIVGGTIRWRRYLDHLIVALCHDERA 402
             KGKGSG NEMGYVERTLGFRT          VTDIVGGTIRWRRYLD+LI +LCHDE+A
Sbjct: 84   DKGKGSGDNEMGYVERTLGFRTKDLDDRDLRLVTDIVGGTIRWRRYLDYLIGSLCHDEKA 143

Query: 403  FRSMEPLLLQILRIGFYEILKLDMPPYAVVDENVTLAKVALRPGAGNMVNGILRRLVFLK 582
            FRSMEPLLLQILRIGFYEI+KLDMP YAVVDENV LAKV+LRPGAGNMVNGILR+LV LK
Sbjct: 144  FRSMEPLLLQILRIGFYEIVKLDMPSYAVVDENVRLAKVSLRPGAGNMVNGILRKLVLLK 203

Query: 583  ENNSLPLPKVEGNDRMQARALATLYSHPVWMVRRWIKYLGQEEAKRLMAWNNCDPSFSLR 762
            E+NSLPLPK+EG+DR QARALATLYSHPVWMVRRW K LGQE+A +LM WNN +PSFSLR
Sbjct: 204  ESNSLPLPKLEGDDRAQARALATLYSHPVWMVRRWTKLLGQEKAIKLMMWNNDNPSFSLR 263

Query: 763  ANIAKGFSRADLVKRLETLKVPHELSRNLDDFVRITTGMQNVIQAGLLKDGLCSVQDEST 942
            AN  KG +RADLV +   LKVPHELS +LD FVR+ TG+Q VIQAGLLK GLC+VQDES 
Sbjct: 264  ANSGKGVTRADLVMQFNMLKVPHELSLHLDHFVRVKTGLQIVIQAGLLKQGLCAVQDESA 323

Query: 943  GLVVSVVDPQPGESIIDCCAAPGGKTLFMASRLRGRGMVYAVDINEGRLRVLKETAKLHE 1122
            GL+VSVV+PQPG+SIIDCCAAPGGKTL+MAS++ G+GM+YA+DIN+GRLR++KETAKLH+
Sbjct: 324  GLIVSVVNPQPGDSIIDCCAAPGGKTLYMASQMHGQGMLYAIDINKGRLRIVKETAKLHQ 383

Query: 1123 VDVVVSTVHADLRIFAENNALKSDKVLLDAPCSGLGVLSKRADLRWNRKLEDMEQLKSLQ 1302
            VD V++T+ +DLR FAE+  LKSDKVLLDAPCSGLGVLSKRADLRWNR+LED+E+LK LQ
Sbjct: 384  VDGVITTIPSDLRTFAESYQLKSDKVLLDAPCSGLGVLSKRADLRWNRRLEDLEELKKLQ 443

Query: 1303 DELLDAASKLVKPGGVLVYSTCSIDPEENEERVAAFLQRQPEFHMDSAAKYVPSSFVTET 1482
            +ELLDAAS LVKPGGVLVYSTCSIDPEENEERV AFL R PEF +D   +YVP  FVT+ 
Sbjct: 444  EELLDAASILVKPGGVLVYSTCSIDPEENEERVDAFLLRHPEFRIDPVDRYVPPDFVTKR 503

Query: 1483 GFFFSNPVEHALDGSF 1530
            GF+ S+PV+H++DG+F
Sbjct: 504  GFYSSDPVKHSMDGAF 519


>ref|XP_003617839.1| Ribosomal RNA small subunit methyltransferase [Medicago truncatula]
            gi|355519174|gb|AET00798.1| Ribosomal RNA small subunit
            methyltransferase [Medicago truncatula]
          Length = 654

 Score =  736 bits (1901), Expect = 0.0
 Identities = 364/470 (77%), Positives = 406/470 (86%)
 Frame = +1

Query: 121  RPNKLNLQVSPHRAVSAVRLMRIEYGGAFADLLNTKGKGSGANEMGYVERTLGFRTXXXX 300
            +P KLN  +SPHRAVSAVRLMRIE GGAFADLLN KGKGSG NEMGYV+RTLGFRT    
Sbjct: 53   KPQKLNSDISPHRAVSAVRLMRIELGGAFADLLNEKGKGSGENEMGYVQRTLGFRTRELN 112

Query: 301  XXXXXXVTDIVGGTIRWRRYLDHLIVALCHDERAFRSMEPLLLQILRIGFYEILKLDMPP 480
                  VT+IVGGTIRWRRYLDHLI +LCHD +   SMEPLLLQILRIGFYEI+KLDMPP
Sbjct: 113  NQDLRLVTEIVGGTIRWRRYLDHLISSLCHD-KDISSMEPLLLQILRIGFYEIVKLDMPP 171

Query: 481  YAVVDENVTLAKVALRPGAGNMVNGILRRLVFLKENNSLPLPKVEGNDRMQARALATLYS 660
            YAVVDENV LAK ALRPGAGNMVNG+LR+LV LKEN +LPLPKVEG+DR QARALATLYS
Sbjct: 172  YAVVDENVQLAKAALRPGAGNMVNGVLRKLVVLKENETLPLPKVEGDDRSQARALATLYS 231

Query: 661  HPVWMVRRWIKYLGQEEAKRLMAWNNCDPSFSLRANIAKGFSRADLVKRLETLKVPHELS 840
            HPVW+VRRW KYLGQEEA +LM WNN +PS+SLRAN AKGFSR DLV  L  LKVPH+LS
Sbjct: 232  HPVWIVRRWTKYLGQEEAIKLMIWNNIEPSYSLRANRAKGFSRDDLVTELNALKVPHKLS 291

Query: 841  RNLDDFVRITTGMQNVIQAGLLKDGLCSVQDESTGLVVSVVDPQPGESIIDCCAAPGGKT 1020
             +LDDFVRI TG+Q +I AGL K+GLCSVQDES GL+VS+VDPQPGE+I+DCCAAPGGKT
Sbjct: 292  LHLDDFVRIKTGLQIIIHAGLFKEGLCSVQDESAGLIVSIVDPQPGETIVDCCAAPGGKT 351

Query: 1021 LFMASRLRGRGMVYAVDINEGRLRVLKETAKLHEVDVVVSTVHADLRIFAENNALKSDKV 1200
            L+MA+ L G+GMVYAVD+N GRLR+LKETAKLH+VD VV+TVHADLR   +   LKS+KV
Sbjct: 352  LYMAAHLSGQGMVYAVDVNSGRLRILKETAKLHQVDGVVTTVHADLRTLTDGEPLKSNKV 411

Query: 1201 LLDAPCSGLGVLSKRADLRWNRKLEDMEQLKSLQDELLDAASKLVKPGGVLVYSTCSIDP 1380
            LLDAPCSGLGVLSKRADLRWNRKLEDMEQLK LQDELLDAAS LVKPGGVLVYSTCSIDP
Sbjct: 412  LLDAPCSGLGVLSKRADLRWNRKLEDMEQLKKLQDELLDAASTLVKPGGVLVYSTCSIDP 471

Query: 1381 EENEERVAAFLQRQPEFHMDSAAKYVPSSFVTETGFFFSNPVEHALDGSF 1530
            EEN++RVAAFL+R  +FH+D   +YVP  FVT  GF+ SNPV+H+LDGSF
Sbjct: 472  EENDDRVAAFLERHADFHIDPVDRYVPPDFVTPKGFYSSNPVKHSLDGSF 521


>ref|XP_003519634.1| PREDICTED: ribosomal RNA small subunit methyltransferase B-like
            [Glycine max]
          Length = 528

 Score =  733 bits (1891), Expect = 0.0
 Identities = 365/470 (77%), Positives = 405/470 (86%)
 Frame = +1

Query: 121  RPNKLNLQVSPHRAVSAVRLMRIEYGGAFADLLNTKGKGSGANEMGYVERTLGFRTXXXX 300
            +  KLN +VSPHRAVSAVRLMRIE GGAFADLLN KGKGSG NEMGYV+RTLGFRT    
Sbjct: 52   KTQKLNSEVSPHRAVSAVRLMRIELGGAFADLLNEKGKGSGENEMGYVQRTLGFRTRELN 111

Query: 301  XXXXXXVTDIVGGTIRWRRYLDHLIVALCHDERAFRSMEPLLLQILRIGFYEILKLDMPP 480
                  VTDIVGGTIRWRRYLDHLI +LCHD +   SMEPLLLQILRIGFYEI+KLDMPP
Sbjct: 112  HHDLRLVTDIVGGTIRWRRYLDHLISSLCHD-KDISSMEPLLLQILRIGFYEIVKLDMPP 170

Query: 481  YAVVDENVTLAKVALRPGAGNMVNGILRRLVFLKENNSLPLPKVEGNDRMQARALATLYS 660
            YAVVDENV LAK ALRPGAGNMVNGILR+LV LKE  SLPLPKVEG+DR QARALATLYS
Sbjct: 171  YAVVDENVKLAKFALRPGAGNMVNGILRKLVVLKEKESLPLPKVEGDDRAQARALATLYS 230

Query: 661  HPVWMVRRWIKYLGQEEAKRLMAWNNCDPSFSLRANIAKGFSRADLVKRLETLKVPHELS 840
            HPVWMVRRW KYLGQEEA +LM WNN +PSFSLRAN A+GFSR DLV +L  LKVPH+LS
Sbjct: 231  HPVWMVRRWTKYLGQEEAIKLMIWNNSEPSFSLRANRARGFSRDDLVTQLNALKVPHKLS 290

Query: 841  RNLDDFVRITTGMQNVIQAGLLKDGLCSVQDESTGLVVSVVDPQPGESIIDCCAAPGGKT 1020
             +LD+FVRI TG+Q +IQAGLLK GLCSVQDES GLVVSVVDPQPGE+IIDCCAAPGGKT
Sbjct: 291  PHLDEFVRIKTGLQIIIQAGLLKKGLCSVQDESAGLVVSVVDPQPGETIIDCCAAPGGKT 350

Query: 1021 LFMASRLRGRGMVYAVDINEGRLRVLKETAKLHEVDVVVSTVHADLRIFAENNALKSDKV 1200
            L+MAS L G+G V+A+D+N GRLR+LKETAKLH+VD V++ +HADLR   ++  LKS+KV
Sbjct: 351  LYMASHLSGQGKVFAIDVNSGRLRILKETAKLHQVDGVITAIHADLRTLPDSGQLKSNKV 410

Query: 1201 LLDAPCSGLGVLSKRADLRWNRKLEDMEQLKSLQDELLDAASKLVKPGGVLVYSTCSIDP 1380
            LLDAPCSGLGVLSKRADLRWN+ LEDMEQLK LQDELLDAASKLVKPGGVLVYSTCSIDP
Sbjct: 411  LLDAPCSGLGVLSKRADLRWNKNLEDMEQLKELQDELLDAASKLVKPGGVLVYSTCSIDP 470

Query: 1381 EENEERVAAFLQRQPEFHMDSAAKYVPSSFVTETGFFFSNPVEHALDGSF 1530
            EEN++RV AFL R  +FH+D   +YVP  F T +GFFFSNPV+H+LDGSF
Sbjct: 471  EENDDRVVAFLARHSDFHIDPVDRYVPPDFETSSGFFFSNPVKHSLDGSF 520


>ref|XP_002522772.1| ribosomal RNA small subunit methyltransferase B, putative [Ricinus
            communis] gi|223538010|gb|EEF39623.1| ribosomal RNA small
            subunit methyltransferase B, putative [Ricinus communis]
          Length = 527

 Score =  721 bits (1862), Expect = 0.0
 Identities = 358/470 (76%), Positives = 405/470 (86%)
 Frame = +1

Query: 121  RPNKLNLQVSPHRAVSAVRLMRIEYGGAFADLLNTKGKGSGANEMGYVERTLGFRTXXXX 300
            +  KLNL+VSPHRAVSAVRLMRIE GGAFADLLN KGKGSG NEMGYVERTLGFRT    
Sbjct: 50   KTQKLNLEVSPHRAVSAVRLMRIEMGGAFADLLNEKGKGSGENEMGYVERTLGFRTKNLD 109

Query: 301  XXXXXXVTDIVGGTIRWRRYLDHLIVALCHDERAFRSMEPLLLQILRIGFYEILKLDMPP 480
                  VTD+VGGTIRWRR+LDHLI +L HDE  FRSMEPLLLQILRIG YEI+KLDMPP
Sbjct: 110  DRDLRLVTDVVGGTIRWRRFLDHLICSLFHDENTFRSMEPLLLQILRIGAYEIVKLDMPP 169

Query: 481  YAVVDENVTLAKVALRPGAGNMVNGILRRLVFLKENNSLPLPKVEGNDRMQARALATLYS 660
            YAVVDENV LAKVALRPGAGNMVNGILR+LV LKENNSLPLPK+EG+ R QARALATL+S
Sbjct: 170  YAVVDENVRLAKVALRPGAGNMVNGILRKLVLLKENNSLPLPKLEGDARAQARALATLHS 229

Query: 661  HPVWMVRRWIKYLGQEEAKRLMAWNNCDPSFSLRANIAKGFSRADLVKRLETLKVPHELS 840
            HPVWMVRRW KYLGQEEA RLM WNN DPSFSLRAN  KG +R DLV RL  LKVP+ELS
Sbjct: 230  HPVWMVRRWTKYLGQEEAIRLMIWNNSDPSFSLRANGGKGVTRDDLVTRLNLLKVPYELS 289

Query: 841  RNLDDFVRITTGMQNVIQAGLLKDGLCSVQDESTGLVVSVVDPQPGESIIDCCAAPGGKT 1020
               D FVR+ TG+Q V+QAGLLK+G CSVQDES GLVVS+V+PQPG+SIIDCCAAPGGKT
Sbjct: 290  PYSDHFVRMRTGLQIVLQAGLLKEGFCSVQDESAGLVVSIVNPQPGDSIIDCCAAPGGKT 349

Query: 1021 LFMASRLRGRGMVYAVDINEGRLRVLKETAKLHEVDVVVSTVHADLRIFAENNALKSDKV 1200
            ++MAS + G+GMVYA+DIN+GRLR+L+ETAKLH++D V++ V +DLR+ AEN  +KSDKV
Sbjct: 350  VYMASLMEGQGMVYAIDINKGRLRILQETAKLHQIDGVITAVPSDLRVLAENYPMKSDKV 409

Query: 1201 LLDAPCSGLGVLSKRADLRWNRKLEDMEQLKSLQDELLDAASKLVKPGGVLVYSTCSIDP 1380
            LLDAPCSGLGVLSKRADLRWNR++ED+E+LK+LQDELLDAAS LVKPGG LVYSTCSIDP
Sbjct: 410  LLDAPCSGLGVLSKRADLRWNRRVEDLEELKNLQDELLDAASTLVKPGGFLVYSTCSIDP 469

Query: 1381 EENEERVAAFLQRQPEFHMDSAAKYVPSSFVTETGFFFSNPVEHALDGSF 1530
            EENEERV AFL R PEF +D   +YVP   VTE GF+ S+PV+H++DG+F
Sbjct: 470  EENEERVDAFLLRHPEFQIDPVDRYVPPDLVTERGFYSSSPVKHSIDGAF 519