BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007101
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279153.1| PREDICTED: DNA replication complex GINS prot...   127   1e-31
ref|XP_002311380.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-27
gb|AFK42443.1| unknown [Medicago truncatula]                          115   6e-26
ref|XP_002519245.1| conserved hypothetical protein [Ricinus comm...   118   4e-25
ref|XP_002274677.2| PREDICTED: DNA replication complex GINS prot...   107   1e-24

>ref|XP_002279153.1| PREDICTED: DNA replication complex GINS protein SLD5 [Vitis
           vinifera] gi|296083231|emb|CBI22867.3| unnamed protein
           product [Vitis vinifera]
          Length = 220

 Score =  127 bits (319), Expect(2) = 1e-31
 Identities = 68/101 (67%), Positives = 81/101 (80%)
 Frame = +3

Query: 21  MAAGTKEGLEFETEEIDDPSIATTPNDVEPMKRAWRNEKASPEILEFQSDLVDRIRGQIE 200
           MA+G++EG  F  ++ +   IATT  DVE +KRAWRNEKA+PEIL FQ+ LV R R QI+
Sbjct: 1   MASGSEEGSGFPADDYES-LIATT--DVELLKRAWRNEKAAPEILHFQTALVQRSREQIQ 57

Query: 201 LNERNVEEFEQNGTDPLTISLYQMDLDRSQFLLRSYLRIRL 323
           L E  VEEF +NGTDPLT+SLYQMDLDR+QFLLRSYLRIRL
Sbjct: 58  LMEETVEEFGENGTDPLTVSLYQMDLDRTQFLLRSYLRIRL 98



 Score = 34.3 bits (77), Expect(2) = 1e-31
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = +1

Query: 364 TDMWNRLSEQEQKFAK 411
           TD+W+RLSEQEQKFAK
Sbjct: 111 TDVWSRLSEQEQKFAK 126


>ref|XP_002311380.1| predicted protein [Populus trichocarpa] gi|222851200|gb|EEE88747.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  117 bits (292), Expect(2) = 7e-27
 Identities = 58/86 (67%), Positives = 69/86 (80%)
 Frame = +3

Query: 66  IDDPSIATTPNDVEPMKRAWRNEKASPEILEFQSDLVDRIRGQIELNERNVEEFEQNGTD 245
           +DD     +  DVE +KRAWRNEKA+PEIL+F+S LV RI+ QIEL E+NVE  E N  D
Sbjct: 10  MDDYETLISTTDVELLKRAWRNEKAAPEILQFESSLVQRIKEQIELAEQNVEISEANNID 69

Query: 246 PLTISLYQMDLDRSQFLLRSYLRIRL 323
           PLT+SLYQMDLDR+QFLLRSYLR+RL
Sbjct: 70  PLTVSLYQMDLDRTQFLLRSYLRVRL 95



 Score = 28.5 bits (62), Expect(2) = 7e-27
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +1

Query: 349 YISKTTDMWNRLSEQEQKFAK 411
           Y+ KT +  NRLS+QEQ FA+
Sbjct: 104 YVLKTDEYLNRLSKQEQMFAR 124


>gb|AFK42443.1| unknown [Medicago truncatula]
          Length = 227

 Score =  115 bits (287), Expect(2) = 6e-26
 Identities = 60/101 (59%), Positives = 77/101 (76%)
 Frame = +3

Query: 21  MAAGTKEGLEFETEEIDDPSIATTPNDVEPMKRAWRNEKASPEILEFQSDLVDRIRGQIE 200
           M + + EG +    +  D  I+TT  DVE +KRAWRNEKA+PEIL F+SDL++R++GQIE
Sbjct: 1   MGSRSAEGEQSSLADDYDALISTT--DVELLKRAWRNEKAAPEILRFESDLINRVKGQIE 58

Query: 201 LNERNVEEFEQNGTDPLTISLYQMDLDRSQFLLRSYLRIRL 323
           L E  VEE    G+DPL++SLYQMDLDR+ FLLRSYLRIR+
Sbjct: 59  LMEETVEEKLSVGSDPLSVSLYQMDLDRTLFLLRSYLRIRI 99



 Score = 27.3 bits (59), Expect(2) = 6e-26
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 349 YISKTTDMWNRLSEQEQKFAK 411
           +I KT ++WNRLS  E+ F +
Sbjct: 108 HIRKTQELWNRLSRDEKLFTE 128


>ref|XP_002519245.1| conserved hypothetical protein [Ricinus communis]
           gi|223541560|gb|EEF43109.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 195

 Score =  118 bits (295), Expect(2) = 4e-25
 Identities = 57/86 (66%), Positives = 71/86 (82%)
 Frame = +3

Query: 66  IDDPSIATTPNDVEPMKRAWRNEKASPEILEFQSDLVDRIRGQIELNERNVEEFEQNGTD 245
           +DD     +  DVE +KRAWRNEKA+PEIL++++ LV RI+ QIEL E+NVE FE +G D
Sbjct: 16  MDDYETLISTTDVELLKRAWRNEKAAPEILQYEASLVQRIKEQIELAEQNVEIFETDGID 75

Query: 246 PLTISLYQMDLDRSQFLLRSYLRIRL 323
           PLT+SLYQMDLDR+QFLLRSYLR+RL
Sbjct: 76  PLTVSLYQMDLDRAQFLLRSYLRVRL 101



 Score = 21.6 bits (44), Expect(2) = 4e-25
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +1

Query: 376 NRLSEQEQKFAK 411
           NRLS+QEQ FA+
Sbjct: 119 NRLSDQEQIFAE 130


>ref|XP_002274677.2| PREDICTED: DNA replication complex GINS protein SLD5-like [Vitis
           vinifera]
          Length = 214

 Score =  107 bits (266), Expect(2) = 1e-24
 Identities = 60/101 (59%), Positives = 75/101 (74%)
 Frame = +3

Query: 21  MAAGTKEGLEFETEEIDDPSIATTPNDVEPMKRAWRNEKASPEILEFQSDLVDRIRGQIE 200
           M +G++E   F  ++ +   IATT  DVE +KRAW NEKA+PEIL FQ+      R QI+
Sbjct: 1   MVSGSEEESGFPADDYES-LIATT--DVELLKRAWMNEKAAPEILHFQT------REQIQ 51

Query: 201 LNERNVEEFEQNGTDPLTISLYQMDLDRSQFLLRSYLRIRL 323
           L E  VEEF +NGTDPLT+SLYQM+LDR+QFLLRSYL+IRL
Sbjct: 52  LMEETVEEFGENGTDPLTVSLYQMNLDRTQFLLRSYLQIRL 92



 Score = 31.2 bits (69), Expect(2) = 1e-24
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +1

Query: 364 TDMWNRLSEQEQKFAK 411
           TD+W+ LSEQEQKFAK
Sbjct: 105 TDVWSWLSEQEQKFAK 120