BLASTX nr result

ID: Coptis21_contig00007094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007094
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20163.3| unnamed protein product [Vitis vinifera]               93   2e-17
ref|XP_002283414.1| PREDICTED: probable disease resistance prote...    93   2e-17
ref|XP_003539578.1| PREDICTED: probable disease resistance prote...    88   6e-16
ref|XP_002332019.1| BED finger-nbs-lrr resistance protein [Popul...    88   6e-16
ref|XP_002333023.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15

>emb|CBI20163.3| unnamed protein product [Vitis vinifera]
          Length = 984

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 49/118 (41%), Positives = 72/118 (61%)
 Frame = -3

Query: 361 RTGLSSTEIPHEDDWSEDLERVSFMESCIEDISIIPKCPKLSTFILSQGSPIRRFPYPLN 182
           +T  +  ++P+E +WS ++ERVS M+S +  +  +P CPKLST  L +     +F YP  
Sbjct: 483 KTRRNLEDLPNEIEWSNNVERVSLMDSHLSTLMFVPNCPKLSTLFLQKP----KFSYPPK 538

Query: 181 SRHSSFLKALKYVVSGFFMHMKSLTVLDLSRTHIESLPDSLSDLVNLRGLLLINCKKL 8
             H         + + FF+HM SL VLDLS T+I  LPDS+ D+VNLR L+L  C++L
Sbjct: 539 GLHEG-------LPNSFFVHMLSLRVLDLSCTNIALLPDSIYDMVNLRALILCECREL 589


>ref|XP_002283414.1| PREDICTED: probable disease resistance protein At4g27220-like
           [Vitis vinifera]
          Length = 1016

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 49/118 (41%), Positives = 72/118 (61%)
 Frame = -3

Query: 361 RTGLSSTEIPHEDDWSEDLERVSFMESCIEDISIIPKCPKLSTFILSQGSPIRRFPYPLN 182
           +T  +  ++P+E +WS ++ERVS M+S +  +  +P CPKLST  L +     +F YP  
Sbjct: 483 KTRRNLEDLPNEIEWSNNVERVSLMDSHLSTLMFVPNCPKLSTLFLQKP----KFSYPPK 538

Query: 181 SRHSSFLKALKYVVSGFFMHMKSLTVLDLSRTHIESLPDSLSDLVNLRGLLLINCKKL 8
             H         + + FF+HM SL VLDLS T+I  LPDS+ D+VNLR L+L  C++L
Sbjct: 539 GLHEG-------LPNSFFVHMLSLRVLDLSCTNIALLPDSIYDMVNLRALILCECREL 589


>ref|XP_003539578.1| PREDICTED: probable disease resistance protein At4g27220-like
           [Glycine max]
          Length = 962

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 53/120 (44%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
 Frame = -3

Query: 361 RTGLSSTEIPHEDDWSEDLERVSFMESCIEDI--SIIPKCPKLSTFILSQGSPIRRFPYP 188
           + GL  TEIP E +W+EDLE+VS M + I +I   I P+CPKL T IL            
Sbjct: 490 KAGLQLTEIPDEVEWNEDLEKVSLMCNWIHEIPTGISPRCPKLRTLILKHN--------- 540

Query: 187 LNSRHSSFLKALKYVVSGFFMHMKSLTVLDLSRTHIESLPDSLSDLVNLRGLLLINCKKL 8
                    ++L  +   FF+HM SL VLDLS T IE LP S++DL  L  LLL +CK+L
Sbjct: 541 ---------ESLTSISDSFFVHMSSLQVLDLSFTDIEVLPKSVADLNTLTALLLTSCKRL 591


>ref|XP_002332019.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222875244|gb|EEF12375.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 909

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 51/120 (42%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
 Frame = -3

Query: 361 RTGLSSTEIPHEDDWSEDLERVSFMESCIEDI--SIIPKCPKLSTFILSQGSPIRRFPYP 188
           + G    E+P  ++W E+L RVS ME+ IE+I  S  P CP LST  L            
Sbjct: 580 KAGAQLKELPDAEEWMENLRRVSLMENEIEEIPSSHSPMCPNLSTLFLCDN--------- 630

Query: 187 LNSRHSSFLKALKYVVSGFFMHMKSLTVLDLSRTHIESLPDSLSDLVNLRGLLLINCKKL 8
                    + L++V   FF  +  L VLDLSRT IE+LPDS+SDLV+L  LL+ NCK L
Sbjct: 631 ---------RGLRFVADSFFKQLNGLMVLDLSRTGIENLPDSISDLVSLTALLIKNCKNL 681


>ref|XP_002333023.1| predicted protein [Populus trichocarpa] gi|222834655|gb|EEE73118.1|
           predicted protein [Populus trichocarpa]
          Length = 681

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 49/120 (40%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
 Frame = -3

Query: 361 RTGLSSTEIPHEDDWSEDLERVSFMESCIEDI--SIIPKCPKLSTFILSQGSPIRRFPYP 188
           + G    E+P  D+W+E+  RVS M + I+DI  S  P+CP LST +L + S        
Sbjct: 199 KAGAQLRELPDADEWTENFTRVSLMHNHIQDIPSSHSPRCPSLSTLLLCENSE------- 251

Query: 187 LNSRHSSFLKALKYVVSGFFMHMKSLTVLDLSRTHIESLPDSLSDLVNLRGLLLINCKKL 8
                      LK++   FF  ++ L VLDLS T+I  LPDS+S+LVNL  LLLI C  L
Sbjct: 252 -----------LKFIADSFFEQLRGLKVLDLSYTNITKLPDSVSELVNLTALLLIGCHML 300


Top