BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007070
         (1699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20322.3| unnamed protein product [Vitis vinifera]              432   e-151
ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containi...   432   e-151
ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containi...   444   e-151
emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]   443   e-150
ref|XP_002519054.1| pentatricopeptide repeat-containing protein,...   428   e-145

>emb|CBI20322.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  432 bits (1110), Expect(2) = e-151
 Identities = 209/342 (61%), Positives = 270/342 (78%)
 Frame = +1

Query: 1    SRISPLGSPSINLVPVLDKWVEEGNKVHVADLQYILKDLRKHRRYAHALQISEWMNTTGV 180
            SRISPLG+P+++LVPVLD+WVEEG KV   +L  I++DLR  +RYA AL++SEWM++  +
Sbjct: 41   SRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSKEL 100

Query: 181  CTFSSSNHAIQLDLIGRVRGLESAESYFNSLSDKDKSEQTYGALLNCYVKERLTDKSLSH 360
            C FS S  A+QLDLIG+VRGLESAE+YFN++S ++K ++ YGALLNCYV+ER+ DKSLSH
Sbjct: 101  CPFSPSARAVQLDLIGQVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSLSH 160

Query: 361  MQKMKEMGMVSTSLGYSDLMGLYINTGEYEKVPGLLNEMKENGVTPDNFSYRMCIYSYGK 540
            +QKMKE+G  ST L Y+ LM LYINT + EK+P +L+EM+ENG++PDNFSYR+CI SYG 
Sbjct: 161  LQKMKELGFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSYGA 220

Query: 541  RSCIDEMEKVLEEMENQSHISMDWNTYTTMAHIYIKAGLTDKAVAXXXXXXXXXXXXDGV 720
            RS ++ MEK+LEEME++SHI +DW TY+ +A+ YIKAGL +KA+             D +
Sbjct: 221  RSDLNSMEKILEEMESKSHIHIDWMTYSMVANFYIKAGLNEKAL-FFLKKAETKLHKDPL 279

Query: 721  GYNYLISLFASLGNKTEVTRLWGLKKTACKKIMNMDYIAMLSSLVKLQELEDAEKLLKEW 900
            GYN+LISL+ASLG+K E+ RLW  +KTA KK++N DYI ML SLVKL ELED E LLKEW
Sbjct: 280  GYNHLISLYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLKEW 339

Query: 901  ESSGNHYDFRVPNVLLIAYTKRGCTEKAEAMLEDLINNGKVP 1026
            ESSGN YDFRVPN LLI + ++G  EKAE+ML D++  GK P
Sbjct: 340  ESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTP 381



 Score =  133 bits (334), Expect(2) = e-151
 Identities = 63/110 (57%), Positives = 86/110 (78%)
 Frame = +3

Query: 1104 AAGYVEKDEMEKALGCMKKAFSVNKSDGGWKPNSTVISSLLHWLGDTCEVKEVEDFVRSL 1283
            AAGY+EK  MEKA  CMK+A +V   + GW+P   VISS+L WLGD  +V+EVE FV +L
Sbjct: 390  AAGYIEKQNMEKAFECMKEAIAVLAENKGWRPKPKVISSILSWLGDNRDVEEVETFVSAL 449

Query: 1284 KDLIPINKDVYYALIKANVREGKDVDGILESMKTNKIDLDEEVGKVLSLK 1433
            K +IP+++++Y+A I+A++R GK+VDGIL+SMK +KID DEE  K+LSLK
Sbjct: 450  KAVIPMDREMYHAQIRASIRAGKEVDGILDSMKADKIDEDEETRKILSLK 499


>ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
            mitochondrial [Vitis vinifera]
          Length = 504

 Score =  432 bits (1110), Expect(2) = e-151
 Identities = 209/342 (61%), Positives = 270/342 (78%)
 Frame = +1

Query: 1    SRISPLGSPSINLVPVLDKWVEEGNKVHVADLQYILKDLRKHRRYAHALQISEWMNTTGV 180
            SRISPLG+P+++LVPVLD+WVEEG KV   +L  I++DLR  +RYA AL++SEWM++  +
Sbjct: 41   SRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSKEL 100

Query: 181  CTFSSSNHAIQLDLIGRVRGLESAESYFNSLSDKDKSEQTYGALLNCYVKERLTDKSLSH 360
            C FS S  A+QLDLIG+VRGLESAE+YFN++S ++K ++ YGALLNCYV+ER+ DKSLSH
Sbjct: 101  CPFSPSARAVQLDLIGQVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSLSH 160

Query: 361  MQKMKEMGMVSTSLGYSDLMGLYINTGEYEKVPGLLNEMKENGVTPDNFSYRMCIYSYGK 540
            +QKMKE+G  ST L Y+ LM LYINT + EK+P +L+EM+ENG++PDNFSYR+CI SYG 
Sbjct: 161  LQKMKELGFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSYGA 220

Query: 541  RSCIDEMEKVLEEMENQSHISMDWNTYTTMAHIYIKAGLTDKAVAXXXXXXXXXXXXDGV 720
            RS ++ MEK+LEEME++SHI +DW TY+ +A+ YIKAGL +KA+             D +
Sbjct: 221  RSDLNSMEKILEEMESKSHIHIDWMTYSMVANFYIKAGLNEKAL-FFLKKAETKLHKDPL 279

Query: 721  GYNYLISLFASLGNKTEVTRLWGLKKTACKKIMNMDYIAMLSSLVKLQELEDAEKLLKEW 900
            GYN+LISL+ASLG+K E+ RLW  +KTA KK++N DYI ML SLVKL ELED E LLKEW
Sbjct: 280  GYNHLISLYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLKEW 339

Query: 901  ESSGNHYDFRVPNVLLIAYTKRGCTEKAEAMLEDLINNGKVP 1026
            ESSGN YDFRVPN LLI + ++G  EKAE+ML D++  GK P
Sbjct: 340  ESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTP 381



 Score =  133 bits (334), Expect(2) = e-151
 Identities = 63/110 (57%), Positives = 86/110 (78%)
 Frame = +3

Query: 1104 AAGYVEKDEMEKALGCMKKAFSVNKSDGGWKPNSTVISSLLHWLGDTCEVKEVEDFVRSL 1283
            AAGY+EK  MEKA  CMK+A +V   + GW+P   VISS+L WLGD  +V+EVE FV +L
Sbjct: 390  AAGYIEKQNMEKAFECMKEAIAVLAENKGWRPKPKVISSILSWLGDNRDVEEVETFVSAL 449

Query: 1284 KDLIPINKDVYYALIKANVREGKDVDGILESMKTNKIDLDEEVGKVLSLK 1433
            K +IP+++++Y+A I+A++R GK+VDGIL+SMK +KID DEE  K+LSLK
Sbjct: 450  KAVIPMDREMYHAQIRASIRAGKEVDGILDSMKADKIDEDEETRKILSLK 499


>ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
            mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  444 bits (1142), Expect(2) = e-151
 Identities = 212/341 (62%), Positives = 269/341 (78%)
 Frame = +1

Query: 1    SRISPLGSPSINLVPVLDKWVEEGNKVHVADLQYILKDLRKHRRYAHALQISEWMNTTGV 180
            ++ISPLG P+ ++VP LD WV+ GNKV VA+LQ I+ DLRK +R++ AL+ISEWM+  G+
Sbjct: 43   NKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEWMSKKGI 102

Query: 181  CTFSSSNHAIQLDLIGRVRGLESAESYFNSLSDKDKSEQTYGALLNCYVKERLTDKSLSH 360
            C FS + HA+QLDLIGRVRG  SAESYFNSL + DK+++TYGALLNCYV++R TDKSLSH
Sbjct: 103  CAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSH 162

Query: 361  MQKMKEMGMVSTSLGYSDLMGLYINTGEYEKVPGLLNEMKENGVTPDNFSYRMCIYSYGK 540
            +QKMKEMG  S+ L Y+D+M LY N G++EKVP +L EMK++ V PDNFSYR+CI SYG 
Sbjct: 163  LQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSNVYPDNFSYRICINSYGA 222

Query: 541  RSCIDEMEKVLEEMENQSHISMDWNTYTTMAHIYIKAGLTDKAVAXXXXXXXXXXXXDGV 720
            +S I  ME VL+EME Q HI MDWNTY   A+ YIKAGL DKA+             DG+
Sbjct: 223  QSDIQGMENVLKEMERQPHIVMDWNTYAVAANFYIKAGLPDKAIEALKKSEERLDKRDGL 282

Query: 721  GYNYLISLFASLGNKTEVTRLWGLKKTACKKIMNMDYIAMLSSLVKLQELEDAEKLLKEW 900
            GYN+LISL+ASLGNK EV RLW L+K+ACK+ +N DYI ML SLV+L ELE+AEK+L+EW
Sbjct: 283  GYNHLISLYASLGNKAEVLRLWSLEKSACKRNINRDYITMLESLVRLGELEEAEKVLREW 342

Query: 901  ESSGNHYDFRVPNVLLIAYTKRGCTEKAEAMLEDLINNGKV 1023
            ESSGN YDFRVPN+++I Y+++G  EKAEAML++L+  GK+
Sbjct: 343  ESSGNCYDFRVPNIVIIGYSEKGLFEKAEAMLKELMEKGKI 383



 Score =  119 bits (297), Expect(2) = e-151
 Identities = 58/111 (52%), Positives = 83/111 (74%)
 Frame = +3

Query: 1104 AAGYVEKDEMEKALGCMKKAFSVNKSDGGWKPNSTVISSLLHWLGDTCEVKEVEDFVRSL 1283
            A+GY+++ EMEKA+ CMK A S++ ++ G KPNS VI+ +L WLGD   V++VE FV SL
Sbjct: 393  ASGYMDEGEMEKAVECMKAAISLHVNNKGRKPNSRVIAGILSWLGDKGRVEDVEAFVGSL 452

Query: 1284 KDLIPINKDVYYALIKANVREGKDVDGILESMKTNKIDLDEEVGKVLSLKE 1436
            + +IP+N+ +Y+ LI AN+R GK+VDG+L SMK +KI  DEE  K+L  K+
Sbjct: 453  RIVIPMNRRMYHTLIMANIRAGKEVDGLLASMKADKIVEDEETKKILGTKQ 503


>emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
          Length = 506

 Score =  443 bits (1139), Expect(2) = e-150
 Identities = 212/341 (62%), Positives = 269/341 (78%)
 Frame = +1

Query: 1    SRISPLGSPSINLVPVLDKWVEEGNKVHVADLQYILKDLRKHRRYAHALQISEWMNTTGV 180
            ++ISPLG P+ ++VP LD WV+ GNKV VA+LQ I+ DLRK +R++ AL+ISEWM+  G+
Sbjct: 43   NKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEWMSKKGI 102

Query: 181  CTFSSSNHAIQLDLIGRVRGLESAESYFNSLSDKDKSEQTYGALLNCYVKERLTDKSLSH 360
            C FS + HA+QLDLIGRVRG  SAESYFNSL + DK+++TYGALLNCYV++R TDKSLSH
Sbjct: 103  CAFSPTEHAVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSH 162

Query: 361  MQKMKEMGMVSTSLGYSDLMGLYINTGEYEKVPGLLNEMKENGVTPDNFSYRMCIYSYGK 540
            +QKMKEMG  S+ L Y+D+M LY N G++EKVP +L EMK++ V PDNFSYR+CI SY  
Sbjct: 163  LQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSHVYPDNFSYRICINSYAA 222

Query: 541  RSCIDEMEKVLEEMENQSHISMDWNTYTTMAHIYIKAGLTDKAVAXXXXXXXXXXXXDGV 720
            +S I  MEKVL+EME Q HI MDWNTY   A+ YIKAGL DKA+             DG+
Sbjct: 223  QSDIQGMEKVLKEMERQPHIVMDWNTYAVAANFYIKAGLPDKAIEALKKSEERLDKRDGL 282

Query: 721  GYNYLISLFASLGNKTEVTRLWGLKKTACKKIMNMDYIAMLSSLVKLQELEDAEKLLKEW 900
            GYN+LISL+ASLGNK EV RLW L+K+ACK+ +N DYI ML SLV+L ELE+AEK+L+EW
Sbjct: 283  GYNHLISLYASLGNKAEVLRLWSLEKSACKRNINRDYITMLESLVRLGELEEAEKVLREW 342

Query: 901  ESSGNHYDFRVPNVLLIAYTKRGCTEKAEAMLEDLINNGKV 1023
            ESSGN YDFRVPN+++I Y+++G  EKAEAML++L+  GK+
Sbjct: 343  ESSGNCYDFRVPNIVIIGYSEKGLFEKAEAMLKELMEKGKI 383



 Score =  119 bits (297), Expect(2) = e-150
 Identities = 58/111 (52%), Positives = 83/111 (74%)
 Frame = +3

Query: 1104 AAGYVEKDEMEKALGCMKKAFSVNKSDGGWKPNSTVISSLLHWLGDTCEVKEVEDFVRSL 1283
            A+GY+++ EMEKA+ CMK A S++ ++ G KPNS VI+ +L WLGD   V++VE FV SL
Sbjct: 393  ASGYMDEGEMEKAVECMKAAISLHVNNKGRKPNSRVIAGILSWLGDKGRVEDVEAFVGSL 452

Query: 1284 KDLIPINKDVYYALIKANVREGKDVDGILESMKTNKIDLDEEVGKVLSLKE 1436
            + +IP+N+ +Y+ LI AN+R GK+VDG+L SMK +KI  DEE  K+L  K+
Sbjct: 453  RIVIPMNRRMYHTLIMANIRAGKEVDGLLASMKADKIVEDEETKKILGTKQ 503


>ref|XP_002519054.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223541717|gb|EEF43265.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 485

 Score =  428 bits (1101), Expect(2) = e-145
 Identities = 204/340 (60%), Positives = 263/340 (77%)
 Frame = +1

Query: 1    SRISPLGSPSINLVPVLDKWVEEGNKVHVADLQYILKDLRKHRRYAHALQISEWMNTTGV 180
            S+ISPLG P+ +LVP LD WV++GNKV V +LQ I++DLRK  R+  AL++SEWMN  G+
Sbjct: 18   SKISPLGDPNTSLVPELDNWVQDGNKVRVGELQRIIRDLRKRNRFTQALEVSEWMNKKGI 77

Query: 181  CTFSSSNHAIQLDLIGRVRGLESAESYFNSLSDKDKSEQTYGALLNCYVKERLTDKSLSH 360
            C FSS+ HA+QLDLIG+VRG  SAE+YFN+L D DK+++TYGALLNCYV++R TD+S+SH
Sbjct: 78   CIFSSTEHAVQLDLIGKVRGFLSAENYFNNLMDHDKTDKTYGALLNCYVRQRQTDRSISH 137

Query: 361  MQKMKEMGMVSTSLGYSDLMGLYINTGEYEKVPGLLNEMKENGVTPDNFSYRMCIYSYGK 540
             QKMKEMG+ S+ L Y+D+M LYIN G YEKV  +L EMKEN ++PDNFSYR+CI SYG 
Sbjct: 138  WQKMKEMGLASSPLAYNDIMCLYINLGLYEKVLHVLTEMKENKISPDNFSYRICINSYGA 197

Query: 541  RSCIDEMEKVLEEMENQSHISMDWNTYTTMAHIYIKAGLTDKAVAXXXXXXXXXXXXDGV 720
            RS I  MEKVL EME +   +MDWNTY  +A+ YIKAGL DKAV             DG+
Sbjct: 198  RSDIQGMEKVLNEMECRLGNAMDWNTYAVVANFYIKAGLADKAVDALRKSEEKLDKKDGI 257

Query: 721  GYNYLISLFASLGNKTEVTRLWGLKKTACKKIMNMDYIAMLSSLVKLQELEDAEKLLKEW 900
            GYN+LISL+A+LG K+EV R+W L+K+ CK+ +N D++ ML SLVKL +LE+AEK+LKEW
Sbjct: 258  GYNHLISLYATLGIKSEVLRIWDLQKSVCKRRINRDFVTMLESLVKLGDLEEAEKVLKEW 317

Query: 901  ESSGNHYDFRVPNVLLIAYTKRGCTEKAEAMLEDLINNGK 1020
            ESSGN YD R+PN++++ Y+K G  EKAEA LE L+  G+
Sbjct: 318  ESSGNFYDVRIPNIVVVGYSKNGLHEKAEASLEALMEKGR 357



 Score =  116 bits (291), Expect(2) = e-145
 Identities = 55/111 (49%), Positives = 75/111 (67%)
 Frame = +3

Query: 1104 AAGYVEKDEMEKALGCMKKAFSVNKSDGGWKPNSTVISSLLHWLGDTCEVKEVEDFVRSL 1283
            A+GY+EK E  KA  CMK AFS+N    GWKPN  V+  +L WLGD    ++VE FV SL
Sbjct: 368  ASGYLEKGEKAKAFECMKAAFSLNVEKKGWKPNPRVVMDILIWLGDEGSPEDVEAFVASL 427

Query: 1284 KDLIPINKDVYYALIKANVREGKDVDGILESMKTNKIDLDEEVGKVLSLKE 1436
               IP+N+ +Y+AL+KA +R G+D   IL+ MKT+KID DEE  ++L + +
Sbjct: 428  SVAIPLNRQIYHALLKAKIRSGRDAHEILDRMKTDKIDEDEETKEILGISK 478