BLASTX nr result

ID: Coptis21_contig00007068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007068
         (1337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16189.3| unnamed protein product [Vitis vinifera]              267   4e-69
ref|XP_002284400.1| PREDICTED: transcription factor MYB59-like [...   267   5e-69
gb|ACR37639.1| unknown [Zea mays] gi|414868507|tpg|DAA47064.1| T...   214   5e-53
gb|ACG36390.1| MYB59 [Zea mays]                                       212   2e-52
ref|NP_001140590.1| MYB transcription factor [Zea mays] gi|19470...   211   3e-52

>emb|CBI16189.3| unnamed protein product [Vitis vinifera]
          Length = 235

 Score =  267 bits (683), Expect = 4e-69
 Identities = 155/320 (48%), Positives = 178/320 (55%), Gaps = 4/320 (1%)
 Frame = +3

Query: 129  MVKEETRKGPWTEHEDLQLVYYVNLFGERRWDFIAKVSGSEVEGTHVLRTR*AYLGRWG* 308
            MV+EE RKGPWTE ED QLV +V LFG+RRWDFIAKVSG                     
Sbjct: 1    MVQEEIRKGPWTEKEDFQLVCFVGLFGDRRWDFIAKVSG--------------------- 39

Query: 309  RS*YL*PPGFVVGLNRTGKSCRLRWVNYLHPGLKRGRMTPHEERLVLELHSRWGNRFE*C 488
                         LNRTGKSCRLRWVNYLHPGLKRG+MTPHEERLVLELHS+WGNR    
Sbjct: 40   -------------LNRTGKSCRLRWVNYLHPGLKRGKMTPHEERLVLELHSQWGNR---- 82

Query: 489  DYKSKXXXXXXXXXXXXXXXXXXXXXXXXXXKET*ETSDRWSRIARKLPGRTDNEIKNYW 668
                                                    WSRIARKLPGRTDNEIKNYW
Sbjct: 83   ----------------------------------------WSRIARKLPGRTDNEIKNYW 102

Query: 669  RTHMRKKAQERKRAXXXXXXXXXXXXPNNDIPIDSSAKAKTEEGTSSKDSEEVKGKVNEE 848
            RTHMRKKAQERKRA            P+++    +    K    T  K  EE      +E
Sbjct: 103  RTHMRKKAQERKRA-------ISPSSPSSNCSSSAPHNPKALAPTGKKTEEE------KE 149

Query: 849  CAKGYPIDRIWDEIASSEEMSSGLVYESCIDEGNSFSYA--PLTSPLWDYCFDSLWRMDE 1022
              KGY +D IW +IA SEE +   VY+   +EG  F+    P+ SP+WDYC DSLWRMDE
Sbjct: 150  ADKGYSMDDIWKDIAFSEENTIKPVYDGYKEEGCDFACPPNPMASPVWDYCPDSLWRMDE 209

Query: 1023 EENKMLLPMTD--LSAYNYG 1076
            EE+KM LPM+D  +S+Y +G
Sbjct: 210  EESKMFLPMSDQFISSYEHG 229


>ref|XP_002284400.1| PREDICTED: transcription factor MYB59-like [Vitis vinifera]
          Length = 258

 Score =  267 bits (682), Expect = 5e-69
 Identities = 157/330 (47%), Positives = 181/330 (54%), Gaps = 12/330 (3%)
 Frame = +3

Query: 123  VKMVKEETRKGPWTEHEDLQLVYYVNLFGERRWDFIAKVSGSEVEGTHVLRTR*AYLGRW 302
            +KMV+EE RKGPWTE ED QLV +V LFG+RRWDFIAKVSG                   
Sbjct: 1    MKMVQEEIRKGPWTEKEDFQLVCFVGLFGDRRWDFIAKVSG------------------- 41

Query: 303  G*RS*YL*PPGFVVGLNRTGKSCRLRWVNYLHPGLKRGRMTPHEERLVLELHSRWGNRFE 482
                           LNRTGKSCRLRWVNYLHPGLKRG+MTPHEERLVLELHS+WGNR  
Sbjct: 42   ---------------LNRTGKSCRLRWVNYLHPGLKRGKMTPHEERLVLELHSQWGNR-- 84

Query: 483  *CDYKSKXXXXXXXXXXXXXXXXXXXXXXXXXXKET*ETSDRWSRIARKLPGRTDNEIKN 662
                                                      WSRIARKLPGRTDNEIKN
Sbjct: 85   ------------------------------------------WSRIARKLPGRTDNEIKN 102

Query: 663  YWRTHMRKKAQERKRA-----XXXXXXXXXXXXPNNDIPIDSSAKAKTEEGTSSKDSEEV 827
            YWRTHMRKKAQERKRA                 P  D+   S  + ++   T    +   
Sbjct: 103  YWRTHMRKKAQERKRAISPSSPSSNCSSSAPHNPKVDLLPFSETEERSFHDTGGPKALAP 162

Query: 828  KGKVNE---ECAKGYPIDRIWDEIASSEEMSSGLVYESCIDEGNSFSYA--PLTSPLWDY 992
             GK  E   E  KGY +D IW +IA SEE +   VY+   +EG  F+    P+ SP+WDY
Sbjct: 163  TGKKTEEEKEADKGYSMDDIWKDIAFSEENTIKPVYDGYKEEGCDFACPPNPMASPVWDY 222

Query: 993  CFDSLWRMDEEENKMLLPMTD--LSAYNYG 1076
            C DSLWRMDEEE+KM LPM+D  +S+Y +G
Sbjct: 223  CPDSLWRMDEEESKMFLPMSDQFISSYEHG 252


>gb|ACR37639.1| unknown [Zea mays] gi|414868507|tpg|DAA47064.1| TPA: putative MYB
            DNA-binding domain superfamily protein isoform 1 [Zea
            mays] gi|414868508|tpg|DAA47065.1| TPA: putative MYB
            DNA-binding domain superfamily protein isoform 2 [Zea
            mays]
          Length = 242

 Score =  214 bits (544), Expect = 5e-53
 Identities = 134/305 (43%), Positives = 155/305 (50%), Gaps = 7/305 (2%)
 Frame = +3

Query: 132  VKEETRKGPWTEHEDLQLVYYVNLFGERRWDFIAKVSGSEVEGTHVLRTR*AYLGRWG*R 311
            V+EETRKGPWTE EDLQLV  V LFGERRWDFIAKVSG                      
Sbjct: 4    VREETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSG---------------------- 41

Query: 312  S*YL*PPGFVVGLNRTGKSCRLRWVNYLHPGLKRGRMTPHEERLVLELHSRWGNRFE*CD 491
                        LNRTGKSCRLRWVNYLHPGLKRGRM+PHEERL+LELH+RWGN      
Sbjct: 42   ------------LNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGN------ 83

Query: 492  YKSKXXXXXXXXXXXXXXXXXXXXXXXXXXKET*ETSDRWSRIARKLPGRTDNEIKNYWR 671
                                                  RWSRIAR+LPGRTDNEIKNYWR
Sbjct: 84   --------------------------------------RWSRIARRLPGRTDNEIKNYWR 105

Query: 672  THMRKKAQERKRAXXXXXXXXXXXXPNN--DIPIDSSAKAKTEEGTSSKDSEEVKGKVNE 845
            THMRKKAQERKR              +   D P     + +   G S   +  +KG   +
Sbjct: 106  THMRKKAQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEGQELHGGSGCITSILKGTPPD 165

Query: 846  ECAKGYPIDRIWDEIAS----SEEMSSGLVYESCIDEGNSFSYAPLTSP-LWDYCFDSLW 1010
                GYP+D+IW EI +    SEE   G  +  C     S    PL  P +W+Y  D+ W
Sbjct: 166  --MDGYPMDQIWMEIEAPQMPSEESFVGGNHNVC-----SSLATPLPPPTVWEYYPDACW 218

Query: 1011 RMDEE 1025
            ++D+E
Sbjct: 219  KVDDE 223


>gb|ACG36390.1| MYB59 [Zea mays]
          Length = 242

 Score =  212 bits (540), Expect = 2e-52
 Identities = 133/305 (43%), Positives = 155/305 (50%), Gaps = 7/305 (2%)
 Frame = +3

Query: 132  VKEETRKGPWTEHEDLQLVYYVNLFGERRWDFIAKVSGSEVEGTHVLRTR*AYLGRWG*R 311
            V+EETRKGPWTE EDLQLV  V LFGERRWDFIAKVSG                      
Sbjct: 4    VREETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSG---------------------- 41

Query: 312  S*YL*PPGFVVGLNRTGKSCRLRWVNYLHPGLKRGRMTPHEERLVLELHSRWGNRFE*CD 491
                        LNRTGKSCRLRWVNYLHPGLKRGRM+PHEERL+LELH+RWGN      
Sbjct: 42   ------------LNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGN------ 83

Query: 492  YKSKXXXXXXXXXXXXXXXXXXXXXXXXXXKET*ETSDRWSRIARKLPGRTDNEIKNYWR 671
                                                  RWSRIAR+LPGRTDNEIKNYWR
Sbjct: 84   --------------------------------------RWSRIARRLPGRTDNEIKNYWR 105

Query: 672  THMRKKAQERKRAXXXXXXXXXXXXPNN--DIPIDSSAKAKTEEGTSSKDSEEVKGKVNE 845
            THMRKKAQERKR              +   D P     + +   G S   +  +KG   +
Sbjct: 106  THMRKKAQERKRNMSPSSSSSSLTYQSGYPDTPSTIGVEGQELHGGSGCITSILKGTPPD 165

Query: 846  ECAKGYPIDRIWDEIAS----SEEMSSGLVYESCIDEGNSFSYAPLTSP-LWDYCFDSLW 1010
                GYP+D+IW EI +    SEE   G  +  C     S    PL  P +W+Y  ++ W
Sbjct: 166  --MDGYPMDQIWMEIEAPQMPSEESFVGGNHNVC-----SSLATPLPPPTVWEYYPEACW 218

Query: 1011 RMDEE 1025
            ++D+E
Sbjct: 219  KVDDE 223


>ref|NP_001140590.1| MYB transcription factor [Zea mays] gi|194700104|gb|ACF84136.1|
            unknown [Zea mays] gi|323388565|gb|ADX60087.1| MYB
            transcription factor [Zea mays]
            gi|414878076|tpg|DAA55207.1| TPA: putative MYB
            DNA-binding domain superfamily protein [Zea mays]
          Length = 250

 Score =  211 bits (538), Expect = 3e-52
 Identities = 133/305 (43%), Positives = 152/305 (49%), Gaps = 7/305 (2%)
 Frame = +3

Query: 132  VKEETRKGPWTEHEDLQLVYYVNLFGERRWDFIAKVSGSEVEGTHVLRTR*AYLGRWG*R 311
            V+EETRKGPWTE EDLQLV  V LFGERRWDFIAKVSG                      
Sbjct: 4    VREETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSG---------------------- 41

Query: 312  S*YL*PPGFVVGLNRTGKSCRLRWVNYLHPGLKRGRMTPHEERLVLELHSRWGNRFE*CD 491
                        LNRTGKSCRLRWVNYLHPGLKRGRM+PHEERL+LELH+RWGN      
Sbjct: 42   ------------LNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGN------ 83

Query: 492  YKSKXXXXXXXXXXXXXXXXXXXXXXXXXXKET*ETSDRWSRIARKLPGRTDNEIKNYWR 671
                                                  RWSRIAR+LPGRTDNEIKNYWR
Sbjct: 84   --------------------------------------RWSRIARRLPGRTDNEIKNYWR 105

Query: 672  THMRKKAQERKRAXXXXXXXXXXXXPNN--DIPIDSSAKAKTEEGTSSKDSEEVKGKVNE 845
            THMRKKAQERKR              +   D P     K +   G S   +  +KG    
Sbjct: 106  THMRKKAQERKRNMSPSSSSSSLSYQSGYPDTPSIIGVKGQELHGGSGCITSILKG--TH 163

Query: 846  ECAKGYPIDRIWDEIASSEEMSSGLVYESCIDEGNSFSYAPLTSPL-----WDYCFDSLW 1010
                GYP+D+IW EI + E  S     E     GN    + L +PL     W+Y  +  W
Sbjct: 164  PDMDGYPMDQIWMEIEAPEVPS-----EVGFVGGNENVCSSLATPLPPPTVWEYYPEVCW 218

Query: 1011 RMDEE 1025
            ++D+E
Sbjct: 219  KLDDE 223


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