BLASTX nr result

ID: Coptis21_contig00007065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007065
         (1119 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630693.1| Derlin-1 [Medicago truncatula] gi|355524715|...   384   e-104
ref|XP_004135679.1| PREDICTED: derlin-1-like [Cucumis sativus] g...   376   e-102
ref|XP_003530537.1| PREDICTED: derlin-1-like [Glycine max]            376   e-102
ref|XP_003525291.1| PREDICTED: derlin-1-like [Glycine max]            375   e-101
ref|XP_002275238.1| PREDICTED: derlin-1 [Vitis vinifera] gi|2960...   375   e-101

>ref|XP_003630693.1| Derlin-1 [Medicago truncatula] gi|355524715|gb|AET05169.1| Derlin-1
           [Medicago truncatula] gi|388496922|gb|AFK36527.1|
           unknown [Medicago truncatula]
          Length = 245

 Score =  384 bits (986), Expect = e-104
 Identities = 183/246 (74%), Positives = 213/246 (86%), Gaps = 5/246 (2%)
 Frame = +3

Query: 24  MSSPSEFYNSLPPISKAYGTVCFLATAAFQLGIYNPLHIALIHELVFKRFQLWRLFTNFF 203
           MSSP EFY SLPPISKAYGT C +ATA +QLG+YNP+HIAL++E VF RFQ+WRLFTNFF
Sbjct: 1   MSSPGEFYKSLPPISKAYGTACLVATAVYQLGLYNPVHIALLYERVFFRFQVWRLFTNFF 60

Query: 204 FLGPFSVNFAIRLLMIARYGVQVERGPFDRRPADFLWMMFFGAFSLLIFSAIPWFRSPFL 383
           FLGPFS+NF IRLLMI RYGVQ+E+GPFDRR ADFLWMM FGAF+LL+ SAIP+F +PFL
Sbjct: 61  FLGPFSINFGIRLLMIVRYGVQLEKGPFDRRTADFLWMMIFGAFALLVLSAIPFFWTPFL 120

Query: 384 GVSLVFMLLYVWSREFPNAQVNIYGLVSLRAFYLPWAMLALDVIFGSSPLPDLLGILAGH 563
            +SLVFMLLYVWSREFPNAQ+N+YGLV+L+AFYLPWAMLALDVIFGS+ +PDLLGI+AGH
Sbjct: 121 AISLVFMLLYVWSREFPNAQINLYGLVALKAFYLPWAMLALDVIFGSALMPDLLGIIAGH 180

Query: 564 LHYFLTVLYPLAGGKNVLKTPNWVHKLVRRWGIAYHPTGQA-----VQPDRNAGTAFRGR 728
           L+YFLTVL+PLAGGKN+LKTP WVHKLV RW I   P  +      VQ + ++G  FRGR
Sbjct: 181 LYYFLTVLHPLAGGKNILKTPMWVHKLVARWRIGAPPITRGQPVNNVQQESSSG-VFRGR 239

Query: 729 SYRLSG 746
           SYRL+G
Sbjct: 240 SYRLNG 245


>ref|XP_004135679.1| PREDICTED: derlin-1-like [Cucumis sativus]
           gi|449489818|ref|XP_004158425.1| PREDICTED:
           derlin-1-like [Cucumis sativus]
          Length = 242

 Score =  376 bits (966), Expect = e-102
 Identities = 181/242 (74%), Positives = 208/242 (85%), Gaps = 1/242 (0%)
 Frame = +3

Query: 24  MSSPSEFYNSLPPISKAYGTVCFLATAAFQLGIYNPLHIALIHELVFKRFQLWRLFTNFF 203
           MSSP+EFYNSLPPISKAYGT+CFLAT AFQLG+Y+P+ IAL + LVFK FQ+WRLFTNFF
Sbjct: 1   MSSPAEFYNSLPPISKAYGTLCFLATTAFQLGLYDPMLIALDYGLVFKHFQVWRLFTNFF 60

Query: 204 FLGPFSVNFAIRLLMIARYGVQVERGPFDRRPADFLWMMFFGAFSLLIFSAIPWFRSPFL 383
           FLG FS+NF IRLLMIARYGVQ+E GPF RR ADFLWMM FG+ +LL+ +AIP F+ P L
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGSLTLLVLAAIPIFQFPVL 120

Query: 384 GVSLVFMLLYVWSREFPNAQVNIYGLVSLRAFYLPWAMLALDVIFGSSPLPDLLGILAGH 563
           G+SLVFMLLYVWSREFPNAQ+NIYGLV+L+AFYLPWAMLALDVIFGS  +PDLLGILAGH
Sbjct: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180

Query: 564 LHYFLTVLYPLAGGKNVLKTPNWVHKLVRRWGIAYHPTGQAVQP-DRNAGTAFRGRSYRL 740
           L+YFLTVL+PLAGGKN+L+TP W+ +LV RW I   P  +A  P DR    AFRGRSYRL
Sbjct: 181 LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPMQRAAVPDDRGTSGAFRGRSYRL 240

Query: 741 SG 746
           +G
Sbjct: 241 NG 242


>ref|XP_003530537.1| PREDICTED: derlin-1-like [Glycine max]
          Length = 246

 Score =  376 bits (966), Expect = e-102
 Identities = 179/246 (72%), Positives = 206/246 (83%), Gaps = 5/246 (2%)
 Frame = +3

Query: 24  MSSPSEFYNSLPPISKAYGTVCFLATAAFQLGIYNPLHIALIHELVFKRFQLWRLFTNFF 203
           MSSP+EFY+SLPPI+KAYGTVC LATA + LG+Y+P +IAL ++ VF  FQ+WRLFTN F
Sbjct: 1   MSSPAEFYHSLPPITKAYGTVCLLATATYHLGLYHPAYIALFYDKVFYGFQVWRLFTNLF 60

Query: 204 FLGPFSVNFAIRLLMIARYGVQVERGPFDRRPADFLWMMFFGAFSLLIFSAIPWFRSPFL 383
           FLGPFS+NF IRLLMI RYGVQ+E+GPFDRR ADFLWMM FGAF+LL+ SAIP F SPFL
Sbjct: 61  FLGPFSINFGIRLLMIVRYGVQLEKGPFDRRTADFLWMMIFGAFALLVLSAIPIFWSPFL 120

Query: 384 GVSLVFMLLYVWSREFPNAQVNIYGLVSLRAFYLPWAMLALDVIFGSSPLPDLLGILAGH 563
            V LVFMLLYVWSREFPNAQ+NIYGLV+L+AFYLPWAMLALDVIFGS  +PDLLGI+AGH
Sbjct: 121 AVPLVFMLLYVWSREFPNAQINIYGLVALKAFYLPWAMLALDVIFGSPLIPDLLGIIAGH 180

Query: 564 LHYFLTVLYPLAGGKNVLKTPNWVHKLVRRWGIAYHPTGQA-----VQPDRNAGTAFRGR 728
           L+YF TVL+PLAGGKN+LKTP WVHKL+ RW I   P  +       Q +R +G AFRGR
Sbjct: 181 LYYFFTVLHPLAGGKNILKTPMWVHKLIARWRIGVQPISRGPAANNPQQERGSGVAFRGR 240

Query: 729 SYRLSG 746
           SYRL G
Sbjct: 241 SYRLGG 246


>ref|XP_003525291.1| PREDICTED: derlin-1-like [Glycine max]
          Length = 246

 Score =  375 bits (963), Expect = e-101
 Identities = 182/246 (73%), Positives = 208/246 (84%), Gaps = 5/246 (2%)
 Frame = +3

Query: 24  MSSPSEFYNSLPPISKAYGTVCFLATAAFQLGIYNPLHIALIHELVFKRFQLWRLFTNFF 203
           MSSP+EFY+SLPPI+KAYGTVC LATA + LG+ +P +IAL+++ VF  FQ WRLFTN F
Sbjct: 1   MSSPAEFYHSLPPITKAYGTVCLLATATYHLGLDHPAYIALLYDKVFYGFQAWRLFTNLF 60

Query: 204 FLGPFSVNFAIRLLMIARYGVQVERGPFDRRPADFLWMMFFGAFSLLIFSAIPWFRSPFL 383
           FLGPFS+NF IRLLMI RYGVQ+E+GPFDRR ADFLWMM FGAF+LL+ SAIP F SPFL
Sbjct: 61  FLGPFSINFGIRLLMIVRYGVQLEKGPFDRRTADFLWMMIFGAFALLVLSAIPIFWSPFL 120

Query: 384 GVSLVFMLLYVWSREFPNAQVNIYGLVSLRAFYLPWAMLALDVIFGSSPLPDLLGILAGH 563
            V LVFMLLYVWSREFPNAQ+NIYGLV+L+AFYLPWAMLALD+IFGS  +PDLLGI+AGH
Sbjct: 121 AVPLVFMLLYVWSREFPNAQINIYGLVALKAFYLPWAMLALDIIFGSPLIPDLLGIIAGH 180

Query: 564 LHYFLTVLYPLAGGKNVLKTPNWVHKLVRRWGIAYHP--TGQAV---QPDRNAGTAFRGR 728
           L+YFLTVL+PLAGGKN+LKTP WVHKLV RW I   P   GQA    Q +R +G AFRGR
Sbjct: 181 LYYFLTVLHPLAGGKNILKTPMWVHKLVARWIIGVQPISRGQAANDPQQERGSGVAFRGR 240

Query: 729 SYRLSG 746
           SYRL G
Sbjct: 241 SYRLGG 246


>ref|XP_002275238.1| PREDICTED: derlin-1 [Vitis vinifera] gi|296081591|emb|CBI20596.3|
           unnamed protein product [Vitis vinifera]
          Length = 240

 Score =  375 bits (962), Expect = e-101
 Identities = 179/241 (74%), Positives = 207/241 (85%)
 Frame = +3

Query: 24  MSSPSEFYNSLPPISKAYGTVCFLATAAFQLGIYNPLHIALIHELVFKRFQLWRLFTNFF 203
           MS+P+EFYNSLPPISKAYGT+C +AT AF LG++ P++ ALI+ELVFK FQ+WRL TNFF
Sbjct: 1   MSTPAEFYNSLPPISKAYGTMCLVATTAFHLGLFPPMYTALIYELVFKHFQVWRLVTNFF 60

Query: 204 FLGPFSVNFAIRLLMIARYGVQVERGPFDRRPADFLWMMFFGAFSLLIFSAIPWFRSPFL 383
           FLG FS+NF IRLLMIARYGVQ+E+G F+RR ADFLWMM FGA +LL+ SAIP   +PFL
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLEKGVFERRTADFLWMMIFGALTLLVLSAIPLLWTPFL 120

Query: 384 GVSLVFMLLYVWSREFPNAQVNIYGLVSLRAFYLPWAMLALDVIFGSSPLPDLLGILAGH 563
           GVSLVFMLLYVWSREFPNAQ+N+YGLV L+AFY PWAMLALDVIFGS  LPDLLGI+AGH
Sbjct: 121 GVSLVFMLLYVWSREFPNAQINLYGLVQLKAFYFPWAMLALDVIFGSQILPDLLGIVAGH 180

Query: 564 LHYFLTVLYPLAGGKNVLKTPNWVHKLVRRWGIAYHPTGQAVQPDRNAGTAFRGRSYRLS 743
           L+YFLTVL+PL+ GKN+LKTP WVHKLV R+ I Y PT    QP+R AG AFRGR YRL+
Sbjct: 181 LYYFLTVLHPLSTGKNILKTPRWVHKLVARFRIGY-PTTAPAQPERAAGVAFRGRGYRLN 239

Query: 744 G 746
           G
Sbjct: 240 G 240


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