BLASTX nr result

ID: Coptis21_contig00007055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007055
         (1219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN94269.1| R2R3 Myb4b C2 repressor motif protein [Vitis vini...   219   6e-98
gb|AAK19619.1|AF336286_1 GHMYB9 [Gossypium hirsutum] gi|20729882...   220   1e-97
ref|XP_002278222.1| PREDICTED: myb-related protein 308 [Vitis vi...   220   4e-97
ref|XP_002263863.1| PREDICTED: myb-related protein 308 [Vitis vi...   219   5e-97
gb|ADL36756.1| MYB domain class transcription factor [Malus x do...   220   1e-92

>gb|ACN94269.1| R2R3 Myb4b C2 repressor motif protein [Vitis vinifera]
          Length = 242

 Score =  219 bits (559), Expect(2) = 6e-98
 Identities = 100/102 (98%), Positives = 102/102 (100%)
 Frame = -1

Query: 994 MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 815
           MGRSPCCEKAHTNKGAWTKEEDDRLIAHI+AHGEGCWRSLPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDDRLIAHIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 814 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDN 689
           LRPDLKRGNFT+EEDELIIKLHSLLGNKWSLIAGRLPGRTDN
Sbjct: 61  LRPDLKRGNFTDEEDELIIKLHSLLGNKWSLIAGRLPGRTDN 102



 Score =  166 bits (419), Expect(2) = 6e-98
 Identities = 84/158 (53%), Positives = 101/158 (63%)
 Frame = -3

Query: 620 PGRTDNEIKNYWNTHIRRKLLSRGVDPATHRAMNEPVSDVKTISFASVTKEEEKIVVGYE 441
           PGRTDNEIKNYWNTHIRRKLLSRG+DP THR +NEP  DV T+SF  V K+EE +  G+ 
Sbjct: 97  PGRTDNEIKNYWNTHIRRKLLSRGIDPLTHRPINEPAVDVATVSFGGVLKKEEVMSSGFG 156

Query: 440 CKEEKSSIIQREERCPDLNLELQISPPYYQPPQESMKSSERRSLCFSCSLGLLNSKDXXX 261
           CK         EE CPDLNLEL+ISPP++ P    + S ERR LCF CSLGL  SK+   
Sbjct: 157 CKSRNPD----EENCPDLNLELRISPPHHHPSPPVLDSRERRMLCFYCSLGLEKSKE--- 209

Query: 260 XXXXXXXXXXXXXXXXXXGNDFLGLRSGILDFRNWDMK 147
                              +DFLG+ +G+LD+RN +MK
Sbjct: 210 -------CSCSSGSGNGSSDDFLGMNNGVLDYRNLEMK 240


>gb|AAK19619.1|AF336286_1 GHMYB9 [Gossypium hirsutum] gi|207298825|gb|ACI23564.1| MYB-like
           protein 3 [Gossypium barbadense]
          Length = 264

 Score =  220 bits (560), Expect(2) = 1e-97
 Identities = 101/102 (99%), Positives = 102/102 (100%)
 Frame = -1

Query: 994 MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 815
           MGRSPCCEKAHTNKGAWTKEEDDRLIA+IRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 814 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDN 689
           LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDN
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDN 102



 Score =  164 bits (415), Expect(2) = 1e-97
 Identities = 89/170 (52%), Positives = 108/170 (63%), Gaps = 12/170 (7%)
 Frame = -3

Query: 620 PGRTDNEIKNYWNTHIRRKLLSRGVDPATHRAMNEPVSDVKTISFASVTKEEEKI----- 456
           PGRTDNEIKNYWNTHIRRKLLSRG+DPATHR +NE   DV TISF+   +E+EKI     
Sbjct: 97  PGRTDNEIKNYWNTHIRRKLLSRGIDPATHRPLNEASQDVTTISFSGAKEEKEKINTNSN 156

Query: 455 --VVGYECKEEKSSIIQREERCPDLNLELQISPPYYQPPQESMKSSERRSLCFSCSLGLL 282
              +G+  K+EK   +Q  ERCPDLNL+L+ISPPYYQ  Q     +  R+LCF CSLG+ 
Sbjct: 157 NNPIGFITKDEKKIPVQ--ERCPDLNLDLRISPPYYQQTQPESFKTGGRTLCFICSLGVK 214

Query: 281 NSKDXXXXXXXXXXXXXXXXXXXXXGN-----DFLGLRSGILDFRNWDMK 147
           NSKD                      N     DFLGL+SGIL++R+ +MK
Sbjct: 215 NSKDCTCSTITTAAGSSSSSSSHSNSNNSSGYDFLGLKSGILEYRSLEMK 264


>ref|XP_002278222.1| PREDICTED: myb-related protein 308 [Vitis vinifera]
           gi|119220854|gb|ABL61515.1| R2R3 Myb4a C2 repressor
           motif protein [Vitis vinifera]
          Length = 251

 Score =  220 bits (560), Expect(2) = 4e-97
 Identities = 101/102 (99%), Positives = 102/102 (100%)
 Frame = -1

Query: 994 MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 815
           MGRSPCCEKAHTNKGAWTKEEDDRLIA+IRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 814 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDN 689
           LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDN
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDN 102



 Score =  162 bits (411), Expect(2) = 4e-97
 Identities = 87/165 (52%), Positives = 108/165 (65%), Gaps = 7/165 (4%)
 Frame = -3

Query: 620 PGRTDNEIKNYWNTHIRRKLLSRGVDPATHRAMNEPVSDVKTISFASVTKEEEKIVV--- 450
           PGRTDNEIKNYWNTHIRRKLL+RG+DP+THR +NEP  DV TISFA+  KEEEKI +   
Sbjct: 97  PGRTDNEIKNYWNTHIRRKLLNRGIDPSTHRPINEPSPDVTTISFAAAVKEEEKINISST 156

Query: 449 -GYECKEEKSSIIQREERCPDLNLELQISPPYYQPPQESMKSSERRS---LCFSCSLGLL 282
            G+ CK EK+ +    E+CPDLNLEL+ISPPY    +  +K+  R S   LCF+CSLG+ 
Sbjct: 157 GGFGCKTEKNPV---TEKCPDLNLELRISPPYQPQAETPLKTGGRSSSTTLCFACSLGIP 213

Query: 281 NSKDXXXXXXXXXXXXXXXXXXXXXGNDFLGLRSGILDFRNWDMK 147
           NS++                       DFLGL SG+LD+R  +MK
Sbjct: 214 NSEECSCSIGTSSGSSSSGY-------DFLGLTSGVLDYRGLEMK 251


>ref|XP_002263863.1| PREDICTED: myb-related protein 308 [Vitis vinifera]
           gi|297734985|emb|CBI17347.3| unnamed protein product
           [Vitis vinifera]
          Length = 242

 Score =  219 bits (559), Expect(2) = 5e-97
 Identities = 100/102 (98%), Positives = 102/102 (100%)
 Frame = -1

Query: 994 MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 815
           MGRSPCCEKAHTNKGAWTKEEDDRLIAHI+AHGEGCWRSLPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDDRLIAHIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 814 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDN 689
           LRPDLKRGNFT+EEDELIIKLHSLLGNKWSLIAGRLPGRTDN
Sbjct: 61  LRPDLKRGNFTDEEDELIIKLHSLLGNKWSLIAGRLPGRTDN 102



 Score =  162 bits (411), Expect(2) = 5e-97
 Identities = 83/158 (52%), Positives = 100/158 (63%)
 Frame = -3

Query: 620 PGRTDNEIKNYWNTHIRRKLLSRGVDPATHRAMNEPVSDVKTISFASVTKEEEKIVVGYE 441
           PGRTDNEIKNYWNTHIRRKLLSRG+DP THR +NE   DV T+SF  V K+EE +  G+ 
Sbjct: 97  PGRTDNEIKNYWNTHIRRKLLSRGIDPLTHRPINEAAVDVATVSFGGVLKKEEVMSSGFG 156

Query: 440 CKEEKSSIIQREERCPDLNLELQISPPYYQPPQESMKSSERRSLCFSCSLGLLNSKDXXX 261
           CK         EE CPDLNLEL+ISPP++ P    + S ERR LCF CSLGL  SK+   
Sbjct: 157 CKSRNPD----EENCPDLNLELRISPPHHHPSPPVLDSRERRMLCFYCSLGLEKSKE--- 209

Query: 260 XXXXXXXXXXXXXXXXXXGNDFLGLRSGILDFRNWDMK 147
                              +DFLG+ +G+LD+RN +MK
Sbjct: 210 -------CSCSSGSGNGSSDDFLGMNNGVLDYRNLEMK 240


>gb|ADL36756.1| MYB domain class transcription factor [Malus x domestica]
          Length = 255

 Score =  220 bits (560), Expect(2) = 1e-92
 Identities = 101/102 (99%), Positives = 102/102 (100%)
 Frame = -1

Query: 994 MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 815
           MGRSPCCEKAHTNKGAWTKEEDDRLIA+IRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 814 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDN 689
           LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDN
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDN 102



 Score =  147 bits (372), Expect(2) = 1e-92
 Identities = 85/166 (51%), Positives = 107/166 (64%), Gaps = 8/166 (4%)
 Frame = -3

Query: 620 PGRTDNEIKNYWNTHIRRKLLSRGVDPATHRAMNE-PVSDVKTISFASVT---KEEEK-- 459
           PGRTDNEIKNYWNTHIRRKLL+RG+DP THR +NE P     TISFA+ +   KEE+K  
Sbjct: 97  PGRTDNEIKNYWNTHIRRKLLTRGIDPTTHRPLNETPQESATTISFAAASANIKEEDKKI 156

Query: 458 -IVVGYECKEEKSSIIQREERCPDLNLELQISPPYY-QPPQESMKSSERRSLCFSCSLGL 285
            I  G  CK+ K+ +   +ERCPDLNL+LQISPP   Q P + +KS   R LCFSCSLGL
Sbjct: 157 SITNGLVCKDSKNPV---QERCPDLNLDLQISPPCQPQQPSDGLKSG-GRGLCFSCSLGL 212

Query: 284 LNSKDXXXXXXXXXXXXXXXXXXXXXGNDFLGLRSGILDFRNWDMK 147
            ++K+                       DFLGL++G+LD+R+ +MK
Sbjct: 213 QDAKNCSCGRDAIGGATSGTTNIGY---DFLGLKNGVLDYRSLEMK 255


Top