BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007050
         (1683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001149141.1| LOC100282763 [Zea mays] gi|195625038|gb|ACG3...   357   5e-96
gb|AFW86742.1| 50S ribosomal protein L1 [Zea mays]                    357   7e-96
ref|XP_003563838.1| PREDICTED: 50S ribosomal protein L1-like [Br...   357   7e-96
gb|EEE65850.1| hypothetical protein OsJ_21625 [Oryza sativa Japo...   345   2e-92
gb|EEC80778.1| hypothetical protein OsI_23301 [Oryza sativa Indi...   345   2e-92

>ref|NP_001149141.1| LOC100282763 [Zea mays] gi|195625038|gb|ACG34349.1| 50S ribosomal
            protein L1 [Zea mays]
          Length = 409

 Score =  357 bits (916), Expect = 5e-96
 Identities = 210/384 (54%), Positives = 243/384 (63%), Gaps = 41/384 (10%)
 Frame = +3

Query: 123  NEDQKSQSRSHIPI-IKPVSYAPKPKIINPPVE--------------------PTQKSSA 239
            + D KS S S  P  IKPVSYAPKP+   PP E                    P Q    
Sbjct: 27   SSDAKSSSASPPPPPIKPVSYAPKPQQQAPPEESAAPTTPDVAPRDQSPLPRRPQQPMPP 86

Query: 240  SAWTREDFRYVKDV-----PSMHPVKVAPLXXXXXXXXXXXXXNDANKIHLRRRVITRTE 404
              WTR+D RYVKD      P  +P +VAPL              D        R+  +  
Sbjct: 87   REWTRQDMRYVKDAAPAISPVSYPSRVAPLPEDRPVGGEVEEVQDGGLQGESERI--QMN 144

Query: 405  ALQPV-----------LPFPTLIKVEKKKPKTVLDLQQAIKEVKANA---ERKFDETVEA 542
            A++P            LP+PT+I V K+  K  +DL  AI+ VK +A   +R F ETVEA
Sbjct: 145  AVRPTRSVFGMHEEDRLPYPTVIPVVKRPQKVAIDLIDAIRLVKTSANEKKRNFVETVEA 204

Query: 543  HVILGVDPRRGDQMVRGAATLPHGTGKTVRIAVFXXXXXXXXXXXXXXXXXXXXXXXXXX 722
            HVILGVDPRRGDQMVRGA TLPHGTGKTVR+AVF                          
Sbjct: 205  HVILGVDPRRGDQMVRGALTLPHGTGKTVRVAVFAEGPGADEARAAGADVVGGDELIEEI 264

Query: 723  XK-GGKLNFDKCISTPIFMPRLSKIARILGPRGLMPNNKLGSLTNDVGGAVRDAKRGRVD 899
               GGKL+FDKCI+TP+FMPRLSK+ARILGPRGLMPN KLGS+TNDV GAV+ AK GRVD
Sbjct: 265  RTGGGKLSFDKCIATPMFMPRLSKVARILGPRGLMPNPKLGSVTNDVSGAVKAAKSGRVD 324

Query: 900  FKIDKTAIVHVGLGKVSFTEDTLRENVGAFVNALLLAKPVGLKKTSKYVGYVKSFSLCST 1079
            FKIDKTAIVHVGLGKV+FTE++LREN+GAFV+ALLLAKPVGLKKTSKYVGYVK F+L ST
Sbjct: 325  FKIDKTAIVHVGLGKVNFTEESLRENIGAFVHALLLAKPVGLKKTSKYVGYVKKFTLSST 384

Query: 1080 MGPAFPVSIQSLSLAADHYNKLQL 1151
            MGP  PV+I SLS+AADHYNK+Q+
Sbjct: 385  MGPGLPVTIPSLSVAADHYNKVQV 408


>gb|AFW86742.1| 50S ribosomal protein L1 [Zea mays]
          Length = 409

 Score =  357 bits (915), Expect = 7e-96
 Identities = 216/413 (52%), Positives = 251/413 (60%), Gaps = 41/413 (9%)
 Frame = +3

Query: 36   FSHLVQNPSLTQKLLFXXXXXXXXXXXXLNEDQKSQSRSHIPI-IKPVSYAPKPKIINPP 212
            FS+L +NP   + L               + D KS S S  P  IKPVSYAPKP+   PP
Sbjct: 8    FSYLRRNPQRHRLLSLFH----------FSSDAKSSSASPPPPPIKPVSYAPKPQQQAPP 57

Query: 213  VE--------------------PTQKSSASAWTREDFRYVKDV-----PSMHPVKVAPLX 317
             E                    P Q      WTR+D RYVKD      P  +P +VAPL 
Sbjct: 58   EESAAPTTPDVAPRDQSPLPRRPQQPMPPREWTRQDMRYVKDAAPAISPVSYPSRVAPLP 117

Query: 318  XXXXXXXXXXXXNDANKIHLRRRVITRTEALQPV-----------LPFPTLIKVEKKKPK 464
                         D        R+  +  A +P            LP+PT+I V K+  K
Sbjct: 118  EDRPVGGEVEEVQDGGLQGESERI--QMNAARPTRSVFGMHEEDRLPYPTVIPVVKRPQK 175

Query: 465  TVLDLQQAIKEVKANA---ERKFDETVEAHVILGVDPRRGDQMVRGAATLPHGTGKTVRI 635
              +DL  AI+ VK +A   +R F ETVEAHVILGVDPRRGDQMVRGA TLPHGTGKTVR+
Sbjct: 176  VAIDLIDAIRLVKTSANEKKRNFVETVEAHVILGVDPRRGDQMVRGALTLPHGTGKTVRV 235

Query: 636  AVFXXXXXXXXXXXXXXXXXXXXXXXXXXXK-GGKLNFDKCISTPIFMPRLSKIARILGP 812
            AVF                             GGKL+FDKCI+TP+FMPRLSK+ARILGP
Sbjct: 236  AVFAEGPGADEARAAGADVVGGDELIEEIRTGGGKLSFDKCIATPMFMPRLSKVARILGP 295

Query: 813  RGLMPNNKLGSLTNDVGGAVRDAKRGRVDFKIDKTAIVHVGLGKVSFTEDTLRENVGAFV 992
            RGLMPN KLGS+TNDV GAV+ AK GRVDFKIDKTAIVHVGLGKV+FTE++LREN+GAFV
Sbjct: 296  RGLMPNPKLGSVTNDVSGAVKAAKSGRVDFKIDKTAIVHVGLGKVNFTEESLRENIGAFV 355

Query: 993  NALLLAKPVGLKKTSKYVGYVKSFSLCSTMGPAFPVSIQSLSLAADHYNKLQL 1151
            +ALLLAKPVGLKKTSKYVGYVK F+L STMGP  PV+I SLS+AADHYNK+Q+
Sbjct: 356  HALLLAKPVGLKKTSKYVGYVKKFTLSSTMGPGLPVTIPSLSVAADHYNKVQV 408


>ref|XP_003563838.1| PREDICTED: 50S ribosomal protein L1-like [Brachypodium distachyon]
          Length = 405

 Score =  357 bits (915), Expect = 7e-96
 Identities = 202/374 (54%), Positives = 242/374 (64%), Gaps = 38/374 (10%)
 Frame = +3

Query: 144  SRSHIPIIKPVSYAPKPKI------------------INPPVEPTQKSSASAWTREDFRY 269
            S S  P IKPVSYAPKP+                     PP  P Q+     +TR++ R+
Sbjct: 31   STSAPPPIKPVSYAPKPQAPPEETSAAEAPSASPDSQFPPPRRPQQQPPPPQFTRQEMRF 90

Query: 270  VKDV-----PSMHPVKVAPLXXXXXXXXXXXXX-------NDANKIHLR----RRVITRT 401
            VKD      P  +P +V PL                     +  +I +     RR I   
Sbjct: 91   VKDAGPAIAPVSYPSRVVPLPDDHPADEGAGEGAVEEGLRGEGERIEMEVARARRSIFGV 150

Query: 402  EALQPVLPFPTLIKVEKKKPKTVLDLQQAIKEVKANA---ERKFDETVEAHVILGVDPRR 572
            +  +  +P+PTLI V K+  K  +DL  A++E+K++A   +R F ETVEAHV+LGVDPRR
Sbjct: 151  QVEEETVPYPTLIPVVKRPQKVAIDLVDALREIKSSANEKKRNFTETVEAHVMLGVDPRR 210

Query: 573  GDQMVRGAATLPHGTGKTVRIAVFXXXXXXXXXXXXXXXXXXXXXXXXXXXKGG-KLNFD 749
            GDQMVRGA TLPHGTGKTVR+AVF                           KGG KL+FD
Sbjct: 211  GDQMVRGAITLPHGTGKTVRVAVFAEGPAAEEAKAAGADVVGGDELIEEIRKGGGKLSFD 270

Query: 750  KCISTPIFMPRLSKIARILGPRGLMPNNKLGSLTNDVGGAVRDAKRGRVDFKIDKTAIVH 929
            KCI+TP+FMPRLSK+ARILGPRGLMPN KLGS+TNDV GAV+ AK GRVDFKIDKTAIVH
Sbjct: 271  KCIATPMFMPRLSKVARILGPRGLMPNPKLGSVTNDVSGAVKAAKSGRVDFKIDKTAIVH 330

Query: 930  VGLGKVSFTEDTLRENVGAFVNALLLAKPVGLKKTSKYVGYVKSFSLCSTMGPAFPVSIQ 1109
            VGLGKV+F+E++LREN+GAFVNALLLAKPVGLKKTSKYVGYVK F+L STMGP FPV+I 
Sbjct: 331  VGLGKVNFSEESLRENIGAFVNALLLAKPVGLKKTSKYVGYVKKFTLSSTMGPGFPVTIP 390

Query: 1110 SLSLAADHYNKLQL 1151
            SLS AADHYNK+Q+
Sbjct: 391  SLSAAADHYNKVQV 404


>gb|EEE65850.1| hypothetical protein OsJ_21625 [Oryza sativa Japonica Group]
          Length = 417

 Score =  345 bits (886), Expect = 2e-92
 Identities = 197/374 (52%), Positives = 236/374 (63%), Gaps = 42/374 (11%)
 Frame = +3

Query: 159  PIIKPVSYAPKPKII-------------------NPPVEPTQKSSA---SAWTREDFRYV 272
            P IKPVSYAPKP+                      PP  P +         WTRE+ R+V
Sbjct: 42   PPIKPVSYAPKPQPAPEEAPAAAEEAAPSDDPGSRPPPPPRRSQGPPQRQQWTREEMRFV 101

Query: 273  KDV-----PSMHPVKVAPLXXXXXXXXXXXXX-------NDANKIHL----RRRVITRTE 404
            KD      P  +P +VAPL                     +  +I +     RR     +
Sbjct: 102  KDAGPSITPVSYPARVAPLPEDRPAEEAPPEGPADEGLRGEGERIEMDATRARRSFFGMQ 161

Query: 405  ALQPVLPFPTLIKVEKKKPKTVLDLQQAIKEVKANA---ERKFDETVEAHVILGVDPRRG 575
            A +   P+PTLI VEK+  K  +DL  AI+E+K +A   +R F ETVEAHV+LGVDPRRG
Sbjct: 162  AEEEQAPYPTLIPVEKRPQKVAIDLVDAIREIKTSANEKKRNFTETVEAHVMLGVDPRRG 221

Query: 576  DQMVRGAATLPHGTGKTVRIAVFXXXXXXXXXXXXXXXXXXXXXXXXXXXK-GGKLNFDK 752
            DQMVRGA TLPHGTGKTVR+AVF                             GGKL+FDK
Sbjct: 222  DQMVRGALTLPHGTGKTVRVAVFAEGPAADEARAAGADVVGGDELIEEIRTGGGKLSFDK 281

Query: 753  CISTPIFMPRLSKIARILGPRGLMPNNKLGSLTNDVGGAVRDAKRGRVDFKIDKTAIVHV 932
            CI+TP++MPRLSK+ARILGPRGLMPN KLGS+TNDV GAV+ AK GRVDFKIDKTAIVHV
Sbjct: 282  CIATPMYMPRLSKVARILGPRGLMPNPKLGSVTNDVSGAVKAAKSGRVDFKIDKTAIVHV 341

Query: 933  GLGKVSFTEDTLRENVGAFVNALLLAKPVGLKKTSKYVGYVKSFSLCSTMGPAFPVSIQS 1112
            GLGK++F+++ LREN+GAFV+ALLLAKPVGLKKTSKYVGYVK F+L STMGP FPV+I S
Sbjct: 342  GLGKINFSDENLRENIGAFVHALLLAKPVGLKKTSKYVGYVKKFTLSSTMGPGFPVTIPS 401

Query: 1113 LSLAADHYNKLQLK 1154
            LS AADHYN  +++
Sbjct: 402  LSAAADHYNNSKVQ 415


>gb|EEC80778.1| hypothetical protein OsI_23301 [Oryza sativa Indica Group]
          Length = 417

 Score =  345 bits (886), Expect = 2e-92
 Identities = 197/374 (52%), Positives = 236/374 (63%), Gaps = 42/374 (11%)
 Frame = +3

Query: 159  PIIKPVSYAPKPKII-------------------NPPVEPTQKSSA---SAWTREDFRYV 272
            P IKPVSYAPKP+                      PP  P +         WTRE+ R+V
Sbjct: 42   PPIKPVSYAPKPQPAPEEAPAAAEEAAPSDDPGSRPPPPPRRSQGPPQRQQWTREEMRFV 101

Query: 273  KDV-----PSMHPVKVAPLXXXXXXXXXXXXX-------NDANKIHL----RRRVITRTE 404
            KD      P  +P +VAPL                     +  +I +     RR     +
Sbjct: 102  KDAGPSITPVSYPARVAPLPEDRPAEEAPPEGPADEGLRGEGERIEMDATRARRSFFGMQ 161

Query: 405  ALQPVLPFPTLIKVEKKKPKTVLDLQQAIKEVKANA---ERKFDETVEAHVILGVDPRRG 575
            A +   P+PTLI VEK+  K  +DL  AI+E+K +A   +R F ETVEAHV+LGVDPRRG
Sbjct: 162  AEEEQAPYPTLIPVEKRPQKVAIDLVDAIREIKTSANEKKRNFTETVEAHVMLGVDPRRG 221

Query: 576  DQMVRGAATLPHGTGKTVRIAVFXXXXXXXXXXXXXXXXXXXXXXXXXXXK-GGKLNFDK 752
            DQMVRGA TLPHGTGKTVR+AVF                             GGKL+FDK
Sbjct: 222  DQMVRGALTLPHGTGKTVRVAVFAEGPAADEARAAGADVVGGDELIEEIRTGGGKLSFDK 281

Query: 753  CISTPIFMPRLSKIARILGPRGLMPNNKLGSLTNDVGGAVRDAKRGRVDFKIDKTAIVHV 932
            CI+TP++MPRLSK+ARILGPRGLMPN KLGS+TNDV GAV+ AK GRVDFKIDKTAIVHV
Sbjct: 282  CIATPMYMPRLSKVARILGPRGLMPNPKLGSVTNDVSGAVKAAKSGRVDFKIDKTAIVHV 341

Query: 933  GLGKVSFTEDTLRENVGAFVNALLLAKPVGLKKTSKYVGYVKSFSLCSTMGPAFPVSIQS 1112
            GLGK++F+++ LREN+GAFV+ALLLAKPVGLKKTSKYVGYVK F+L STMGP FPV+I S
Sbjct: 342  GLGKINFSDENLRENIGAFVHALLLAKPVGLKKTSKYVGYVKKFTLSSTMGPGFPVTIPS 401

Query: 1113 LSLAADHYNKLQLK 1154
            LS AADHYN  +++
Sbjct: 402  LSAAADHYNNSKVQ 415