BLASTX nr result

ID: Coptis21_contig00007046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007046
         (943 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889932.1| cornichon family protein [Arabidopsis lyrata...   199   6e-49
ref|NP_172701.2| protein cornichon-4 [Arabidopsis thaliana] gi|7...   198   2e-48
ref|XP_002266561.1| PREDICTED: protein cornichon homolog 4 [Viti...   196   9e-48
ref|XP_004147951.1| PREDICTED: probable protein cornichon homolo...   195   1e-47
ref|NP_563903.2| putative protein cornichon-2 [Arabidopsis thali...   193   6e-47

>ref|XP_002889932.1| cornichon family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335774|gb|EFH66191.1| cornichon family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 137

 Score =  199 bits (507), Expect = 6e-49
 Identities = 91/116 (78%), Positives = 104/116 (89%)
 Frame = -3

Query: 737 VVYQLMCLADLEFDYINPYDSASRINRVVLPEFIAQGVLCLLFLLTGHWIMFLLSLPYLY 558
           +VYQL+CLADLEFDYINPYDSASRIN VVLPEFI QGVLC+ +LLTGHW+M LL LPYLY
Sbjct: 21  IVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWVMTLLCLPYLY 80

Query: 557 YNARLYMRRQHLVDITEIFNQLNWEKKQRLVKLVYLVIHLFLCIFWMIYSVLDDHE 390
           YN +LY +RQHLVD+TEIFN LNWEKK+RL KL Y+V++LFL IFWMIYS LDD+E
Sbjct: 81  YNFQLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYE 136


>ref|NP_172701.2| protein cornichon-4 [Arabidopsis thaliana]
           gi|75148636|sp|Q84W04.1|CNIH4_ARATH RecName:
           Full=Protein cornichon homolog 4
           gi|28416577|gb|AAO42819.1| At1g12390 [Arabidopsis
           thaliana] gi|110743211|dbj|BAE99496.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332190753|gb|AEE28874.1| protein cornichon-4
           [Arabidopsis thaliana]
          Length = 137

 Score =  198 bits (503), Expect = 2e-48
 Identities = 91/116 (78%), Positives = 102/116 (87%)
 Frame = -3

Query: 737 VVYQLMCLADLEFDYINPYDSASRINRVVLPEFIAQGVLCLLFLLTGHWIMFLLSLPYLY 558
           +VYQL+CLADLEFDYINPYDSASRIN VVLPEFI QGVLC+ +LLTGHW M LL LPYLY
Sbjct: 21  IVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLY 80

Query: 557 YNARLYMRRQHLVDITEIFNQLNWEKKQRLVKLVYLVIHLFLCIFWMIYSVLDDHE 390
           YN  LY +RQHLVD+TEIFN LNWEKK+RL KL Y+V++LFL IFWMIYS LDD+E
Sbjct: 81  YNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYE 136


>ref|XP_002266561.1| PREDICTED: protein cornichon homolog 4 [Vitis vinifera]
           gi|297742670|emb|CBI34819.3| unnamed protein product
           [Vitis vinifera]
          Length = 138

 Score =  196 bits (497), Expect = 9e-48
 Identities = 92/116 (79%), Positives = 99/116 (85%)
 Frame = -3

Query: 737 VVYQLMCLADLEFDYINPYDSASRINRVVLPEFIAQGVLCLLFLLTGHWIMFLLSLPYLY 558
           VVYQLMCLADLEFDYINPYDSASRIN+VVLPEFI QGVLCL + LTGHW M LL  PYLY
Sbjct: 21  VVYQLMCLADLEFDYINPYDSASRINKVVLPEFITQGVLCLFYSLTGHWFMSLLCGPYLY 80

Query: 557 YNARLYMRRQHLVDITEIFNQLNWEKKQRLVKLVYLVIHLFLCIFWMIYSVLDDHE 390
           YN RLY RRQHL+D+TEIFN LNWEKKQRL KL YL+  LFL IFWMI S L+DH+
Sbjct: 81  YNVRLYQRRQHLIDVTEIFNLLNWEKKQRLFKLGYLIFLLFLSIFWMILSALEDHD 136


>ref|XP_004147951.1| PREDICTED: probable protein cornichon homolog 2-like isoform 1
           [Cucumis sativus] gi|449494293|ref|XP_004159504.1|
           PREDICTED: probable protein cornichon homolog 2-like
           isoform 1 [Cucumis sativus]
          Length = 136

 Score =  195 bits (495), Expect = 1e-47
 Identities = 89/116 (76%), Positives = 101/116 (87%)
 Frame = -3

Query: 737 VVYQLMCLADLEFDYINPYDSASRINRVVLPEFIAQGVLCLLFLLTGHWIMFLLSLPYLY 558
           +VYQLMCLADLEFDYINP+DSASRIN+V++PEFI  GVLCL +LLTGHW M LLS PY+Y
Sbjct: 21  LVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIY 80

Query: 557 YNARLYMRRQHLVDITEIFNQLNWEKKQRLVKLVYLVIHLFLCIFWMIYSVLDDHE 390
           YN RLY+RRQHL+D+TEIFN LNWEKKQRL KL YLV+ LFL IFWMIY  L+D E
Sbjct: 81  YNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVVLLFLSIFWMIYHALEDDE 136


>ref|NP_563903.2| putative protein cornichon-2 [Arabidopsis thaliana]
           gi|308154344|sp|Q3EDD7.2|CNIH2_ARATH RecName:
           Full=Probable protein cornichon homolog 2
           gi|332190747|gb|AEE28868.1| putative protein cornichon-2
           [Arabidopsis thaliana]
          Length = 129

 Score =  193 bits (490), Expect = 6e-47
 Identities = 88/115 (76%), Positives = 100/115 (86%)
 Frame = -3

Query: 734 VYQLMCLADLEFDYINPYDSASRINRVVLPEFIAQGVLCLLFLLTGHWIMFLLSLPYLYY 555
           ++ L+CLADLEFDYINPYDSASRIN VVLPEFI QGVLC+ +LLTGHW M LL LPYLYY
Sbjct: 14  IFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYY 73

Query: 554 NARLYMRRQHLVDITEIFNQLNWEKKQRLVKLVYLVIHLFLCIFWMIYSVLDDHE 390
           N  LY +RQHLVD+TEIFN LNWEKK+RL KL Y+V++LFL IFWMIYS LDD+E
Sbjct: 74  NFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYE 128


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