BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007042
         (1075 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   155   2e-35
ref|XP_002304565.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-33
ref|XP_002518854.1| ring finger protein, putative [Ricinus commu...   140   4e-31
ref|XP_003543993.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   134   4e-29
ref|XP_003556854.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   133   9e-29

>ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a [Vitis vinifera]
           gi|297742383|emb|CBI34532.3| unnamed protein product
           [Vitis vinifera]
          Length = 248

 Score =  155 bits (391), Expect = 2e-35
 Identities = 78/186 (41%), Positives = 102/186 (54%)
 Frame = +2

Query: 44  MGAPQTQNDPHLYPQALQLKLYQAXXXXXXXXXXXXXXXXXXXXXXKRRRDSNITSSPAT 223
           MG PQT    HLYP+ALQLKLYQA                      KRR  ++ +++P  
Sbjct: 1   MGLPQTPTPTHLYPEALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASTSSSTAPI- 59

Query: 224 LARRLNQSTXXXXXXXXXXXXXXXXXXXXIVIFDEDLRDKDSQCCVCLGDFELKEQLHQI 403
           L   +NQ+                      ++FD++L+ +DS CCVCLG+FE+KE+LHQ+
Sbjct: 60  LPSSMNQAASFLSPSCEIGLKGELKGKLPTILFDDELKARDSLCCVCLGEFEIKEELHQV 119

Query: 404 PSCKHLFHIDCIHHWLKANFTCPLCRCYIFSTKKLNAEPPPVRIDVLHPIDAASEQHRPL 583
           PSCKH+FH DCI+HWL+ N TCPLCRC +F   K      PVR +  HP +  S QHR  
Sbjct: 120 PSCKHVFHADCIYHWLRTNSTCPLCRCSVFPNTKAGNPVSPVRSE--HPDNQNSNQHRQN 177

Query: 584 ASPAQQ 601
            S  QQ
Sbjct: 178 VSSQQQ 183


>ref|XP_002304565.1| predicted protein [Populus trichocarpa] gi|222841997|gb|EEE79544.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  149 bits (375), Expect = 2e-33
 Identities = 96/234 (41%), Positives = 120/234 (51%), Gaps = 6/234 (2%)
 Frame = +2

Query: 44  MGAPQTQNDPHLYPQALQLKLYQAXXXXXXXXXXXXXXXXXXXXXXKRRRDSNITSSPAT 223
           MG PQ+    HLYPQ LQLKLYQA                      KRR  S ++S P  
Sbjct: 1   MGLPQSPTPSHLYPQELQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRTPS-LSSPPRV 59

Query: 224 LARRLNQSTXXXXXXXXXXXXXXXXXXXXIVIFDEDLRDKDSQCCVCLGDFELKEQLHQI 403
           + R  +Q+T                     V+FDE+LR KDSQCCVCLG+FE+KE+L QI
Sbjct: 60  IQRSSSQATRYHVSSIYQKEEITNKLPT--VLFDEELRTKDSQCCVCLGEFEIKEELLQI 117

Query: 404 PSCKHLFHIDCIHHWLKANFTCPLCRCY-IFSTKKLNAEPPPVRIDVL---HPIDAASEQ 571
           PSCKH+FHIDCIHHWL +N TCPLCRCY IF        PP     VL     + A S Q
Sbjct: 118 PSCKHVFHIDCIHHWLHSNSTCPLCRCYVIFPANIFCTNPPQSSGPVLLLQSSVGANSHQ 177

Query: 572 HRPLASPAQQIN--GAINRTSLDHPSEEIMSQV*ESTSGRTCLREATNLDESAL 727
            + + S  QQ    GA +   L  P E       E +S  + LR+++ L E ++
Sbjct: 178 PQNITSELQQQQDVGAGSTEQLVIPME-------EPSSVTSQLRDSSRLPELSI 224


>ref|XP_002518854.1| ring finger protein, putative [Ricinus communis]
           gi|223541841|gb|EEF43387.1| ring finger protein,
           putative [Ricinus communis]
          Length = 265

 Score =  140 bits (354), Expect = 4e-31
 Identities = 89/228 (39%), Positives = 115/228 (50%), Gaps = 16/228 (7%)
 Frame = +2

Query: 44  MGAPQTQN-DPHLYPQALQLKLYQAXXXXXXXXXXXXXXXXXXXXXXKRRRDSNITSSPA 220
           MG P T + + HLYPQALQLKLYQA                      KRR  S ++S   
Sbjct: 1   MGFPPTSSPNAHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRATS-LSSPSQ 59

Query: 221 TLARRLNQSTXXXXXXXXXXXXXXXXXXXXIVIFDEDLRDKDSQCCVCLGDFELKEQLHQ 400
            L    NQ+                     IV+FDEDL+ ++SQCCVCLG+FE+KE+L Q
Sbjct: 60  VLPTSSNQAAQQLPSVCQIGLKKEIKDKLPIVLFDEDLKTRESQCCVCLGEFEMKEELLQ 119

Query: 401 IPSCKHLFHIDCIHHWLKANFTCPLCRCY-IFSTKKL---------NAEPPPVRIDVLHP 550
           IPSCKH+FHI+CIHHWL +N TCPLCR + I  T KL         +  PPP   D    
Sbjct: 120 IPSCKHVFHIECIHHWLHSNTTCPLCRSFVIIPTTKLDNQDQSGGPDTSPPPYNQD---- 175

Query: 551 IDAASEQHRPLASPAQQINGA-----INRTSLDHPSEEIMSQV*ESTS 679
             A S  H  +AS  QQ         IN   ++   ++++  + ES+S
Sbjct: 176 -HANSNHHIQIASLEQQQQQQRQQEFINTQIIEQQQQQLLLPIQESSS 222


>ref|XP_003543993.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 214

 Score =  134 bits (337), Expect = 4e-29
 Identities = 78/187 (41%), Positives = 97/187 (51%), Gaps = 5/187 (2%)
 Frame = +2

Query: 44  MGAPQTQNDP--HLYPQALQLKLYQAXXXXXXXXXXXXXXXXXXXXXXKRRRDSNITSSP 217
           M  PQT   P  HLYPQ LQLKLYQ                       KRR  S+++S+P
Sbjct: 1   MSLPQTATSPPPHLYPQELQLKLYQTFIFSIPILFSIILFLLFYLFYLKRRA-SSLSSTP 59

Query: 218 ATLARRL-NQSTXXXXXXXXXXXXXXXXXXXXI--VIFDEDLRDKDSQCCVCLGDFELKE 388
             L R + N  T                    +  ++FDEDL  +DS CCVCLG+FELKE
Sbjct: 60  HLLPRTIANPPTTSSHIPQPCRLDLTLHFLDKLPRILFDEDLLARDSLCCVCLGEFELKE 119

Query: 389 QLHQIPSCKHLFHIDCIHHWLKANFTCPLCRCYIFSTKKLNAEPPPVRIDVLHPIDAASE 568
           +L QIP CKH+FH++CIHHWL++N TCPLCRC I  T K     PP+ I    P     +
Sbjct: 120 ELVQIPYCKHVFHLECIHHWLQSNSTCPLCRCSIIPTTKFLNPAPPINIISTDP----PQ 175

Query: 569 QHRPLAS 589
           QH  + S
Sbjct: 176 QHGAIIS 182


>ref|XP_003556854.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 211

 Score =  133 bits (334), Expect = 9e-29
 Identities = 82/191 (42%), Positives = 96/191 (50%), Gaps = 6/191 (3%)
 Frame = +2

Query: 44  MGAPQTQNDP--HLYPQALQLKLYQAXXXXXXXXXXXXXXXXXXXXXXKRRRDSNITSS- 214
           M  PQT   P  HLYPQ LQLKLYQA                      KRR  S  +SS 
Sbjct: 1   MSLPQTATSPPPHLYPQELQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSH 60

Query: 215 --PATLARRLNQSTXXXXXXXXXXXXXXXXXXXXIVIFDEDLRDKDSQCCVCLGDFELKE 388
             P T+A     +T                     ++FDEDL  +DS CCVCLG+FELKE
Sbjct: 61  LLPRTIANPPT-TTPYHSSPCRLDLTLQFLDKLPRILFDEDLLARDSLCCVCLGEFELKE 119

Query: 389 QLHQIPSCKHLFHIDCIHHWLKANFTCPLCRCYIF-STKKLNAEPPPVRIDVLHPIDAAS 565
           ++ QIP CKH+FH +CIHHWL++N TCPLCRC I  +TK LN  PP   I    P   A 
Sbjct: 120 EVLQIPYCKHVFHFECIHHWLQSNSTCPLCRCSIIPTTKFLNPAPPINIISSDPPQHGAI 179

Query: 566 EQHRPLASPAQ 598
               PL  P Q
Sbjct: 180 ISDSPLQLPPQ 190