BLASTX nr result

ID: Coptis21_contig00007036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007036
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517891.1| Early nodulin 55-2 precursor, putative [Rici...    99   3e-19
ref|XP_002327913.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
gb|AFK42478.1| unknown [Lotus japonicus]                               97   1e-18
ref|XP_003539599.1| PREDICTED: uncharacterized protein LOC100811...    96   2e-18
ref|XP_002275206.1| PREDICTED: early nodulin-like protein 2 [Vit...    96   3e-18

>ref|XP_002517891.1| Early nodulin 55-2 precursor, putative [Ricinus communis]
           gi|223542873|gb|EEF44409.1| Early nodulin 55-2
           precursor, putative [Ricinus communis]
          Length = 221

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 48/78 (61%), Positives = 59/78 (75%), Gaps = 4/78 (5%)
 Frame = -2

Query: 223 MVSKMFLSVFSLVF---MGFLVS-SQAYDFYVGGKDGWVVKPSESFSHWAERNRFQVNDT 56
           M S+ FL  F  +F   MGFL   S+AY FYVGG+DGWV+ PSE+++ WA RNRFQVNDT
Sbjct: 1   MASRRFLGYFIFIFLVMMGFLSGPSKAYKFYVGGRDGWVLNPSENYTRWAHRNRFQVNDT 60

Query: 55  LVFKYKNGTDSVLVVNKQ 2
           L FKYK G+DSVL+V K+
Sbjct: 61  LFFKYKKGSDSVLLVKKE 78


>ref|XP_002327913.1| predicted protein [Populus trichocarpa] gi|222837322|gb|EEE75701.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
 Frame = -2

Query: 202 SVFSLVFMGFLVS-SQAYDFYVGGKDGWVVKPSESFSHWAERNRFQVNDTLVFKYKNGTD 26
           S+F ++ +GFL+  S+ Y FYVGG+DGW   PSE +SHWAERNRFQVNDTL FKYK G+D
Sbjct: 5   SLFVMLVLGFLLGVSRGYKFYVGGRDGWATNPSERYSHWAERNRFQVNDTLFFKYKKGSD 64

Query: 25  SVLVVNK 5
           SVL+V+K
Sbjct: 65  SVLIVSK 71


>gb|AFK42478.1| unknown [Lotus japonicus]
          Length = 185

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/72 (65%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
 Frame = -2

Query: 208 FLSVFSLVFMGFLVSSQ---AYDFYVGGKDGWVVKPSESFSHWAERNRFQVNDTLVFKYK 38
           FLS+F L+    L+SS    A +F+VGGKDGWV+KPSE + HWA+RNRFQVNDTL FKYK
Sbjct: 5   FLSIFLLMIHMLLLSSSQAAAKEFHVGGKDGWVLKPSEDYKHWAQRNRFQVNDTLYFKYK 64

Query: 37  NGTDSVLVVNKQ 2
            G D VLVVNK+
Sbjct: 65  KGIDWVLVVNKE 76


>ref|XP_003539599.1| PREDICTED: uncharacterized protein LOC100811987 [Glycine max]
          Length = 472

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/63 (73%), Positives = 55/63 (87%), Gaps = 1/63 (1%)
 Frame = -2

Query: 190 LVFMGFLVS-SQAYDFYVGGKDGWVVKPSESFSHWAERNRFQVNDTLVFKYKNGTDSVLV 14
           L+F+  L S SQAY FYVGGKDGWV+ PSE+++HWAER RFQV+DTLVFKYK G+D+VLV
Sbjct: 10  LLFLFSLFSCSQAYTFYVGGKDGWVLYPSENYNHWAERMRFQVSDTLVFKYKKGSDTVLV 69

Query: 13  VNK 5
           VNK
Sbjct: 70  VNK 72


>ref|XP_002275206.1| PREDICTED: early nodulin-like protein 2 [Vitis vinifera]
           gi|302143308|emb|CBI21869.3| unnamed protein product
           [Vitis vinifera]
          Length = 207

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 43/62 (69%), Positives = 49/62 (79%)
 Frame = -2

Query: 187 VFMGFLVSSQAYDFYVGGKDGWVVKPSESFSHWAERNRFQVNDTLVFKYKNGTDSVLVVN 8
           +FM FL SSQ Y FYVGGK GW   PSE +  WAERNRFQVNDTLVFKY+ G +SVLVVN
Sbjct: 13  IFMAFLCSSQGYVFYVGGKQGWSANPSEDYVQWAERNRFQVNDTLVFKYEKGQNSVLVVN 72

Query: 7   KQ 2
           ++
Sbjct: 73  RE 74


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