BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007035
         (1239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containi...   224   5e-56
ref|XP_004156000.1| PREDICTED: proteinaceous RNase P 3-like [Cuc...   223   6e-56
ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containi...   223   6e-56
ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containi...   223   6e-56
emb|CAN79022.1| hypothetical protein VITISV_022893 [Vitis vinifera]   223   6e-56

>ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  224 bits (570), Expect = 5e-56
 Identities = 116/212 (54%), Positives = 150/212 (70%), Gaps = 2/212 (0%)
 Frame = -1

Query: 630 FMYELGTCSKHNNLQGALSLYETALSQNLRFNHNHYNTLIYLCSNSLTNTTNQHDDLLLL 451
           F +EL +CSK  +L+GA+SLY+ A+S N R N +H+N L+YLCSNS+ + +     L   
Sbjct: 19  FQFELNSCSKAKDLRGAISLYDDAVSNNTRLNQHHFNALLYLCSNSVADPS-----LKPT 73

Query: 450 TIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGEFAFQLVKGMGK-YKIA-PRLRT 277
            ++ GF  F  M +  + P EAT+T+VARLAAAKGD ++AF+LVK MGK Y  A PRLRT
Sbjct: 74  ALDYGFRAFRHMSALAVLPNEATVTAVARLAAAKGDADYAFELVKSMGKNYNNALPRLRT 133

Query: 276 FDPALLLFCGNKDVDKAYEVEEYMSTLGIQLEELEIGALLKVSGEVGRVEKVYEYLHMLR 97
           +DPAL  FC   D DKAYEVEE+M+ +G+ LEE E+ ALLKVS   GRV+KVYEYLH LR
Sbjct: 134 YDPALFCFCEMLDADKAYEVEEHMNGVGVSLEEAELAALLKVSARCGRVDKVYEYLHRLR 193

Query: 96  SCVRCVKVSSAQIIEGWFGSEIAAEVGRVDWD 1
           S VRCV  S+A +IE WF    A+EVG  ++D
Sbjct: 194 SSVRCVSESTAVVIEEWFRGSKASEVGEAEFD 225


>ref|XP_004156000.1| PREDICTED: proteinaceous RNase P 3-like [Cucumis sativus]
          Length = 538

 Score =  223 bits (569), Expect = 6e-56
 Identities = 107/210 (50%), Positives = 154/210 (73%)
 Frame = -1

Query: 630 FMYELGTCSKHNNLQGALSLYETALSQNLRFNHNHYNTLIYLCSNSLTNTTNQHDDLLLL 451
           F  +L  CS+  +L  A++L ETA+S+ L+FN  H+NTL+YLCS ++++ + +       
Sbjct: 22  FQLDLTDCSRRKDLLSAITLCETAVSEKLKFNQQHFNTLLYLCSTAISDPSLKES----- 76

Query: 450 TIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGEFAFQLVKGMGKYKIAPRLRTFD 271
            +  GF ++N + S  + P EAT+T+VARLAAAK DG+ AF+LVK +GKYK+ PRLRT+D
Sbjct: 77  AVSFGFRVYNLLQSIGVIPNEATVTAVARLAAAKRDGDSAFELVKTIGKYKVTPRLRTYD 136

Query: 270 PALLLFCGNKDVDKAYEVEEYMSTLGIQLEELEIGALLKVSGEVGRVEKVYEYLHMLRSC 91
           PAL+ FC N +VDKAYEVE++M++ G++LEE +I ALLK+S + G+ +KVYEYLH LR  
Sbjct: 137 PALICFCENLEVDKAYEVEQHMNSAGVELEEPQISALLKLSSDTGKEDKVYEYLHKLRRV 196

Query: 90  VRCVKVSSAQIIEGWFGSEIAAEVGRVDWD 1
           V+CV  S+A+IIEGWF SE A+++G    D
Sbjct: 197 VKCVSESTAKIIEGWFCSEKASDIGESTMD 226


>ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 551

 Score =  223 bits (569), Expect = 6e-56
 Identities = 109/208 (52%), Positives = 154/208 (74%)
 Frame = -1

Query: 630 FMYELGTCSKHNNLQGALSLYETALSQNLRFNHNHYNTLIYLCSNSLTNTTNQHDDLLLL 451
           F ++L TCSK  +L GA++L+E+A+SQN R  H H+N L+YLC+ S+   +++      L
Sbjct: 15  FRFDLDTCSKRRDLSGAVALFESAVSQNFRLIHYHFNALLYLCTISIDEPSSK-----AL 69

Query: 450 TIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGEFAFQLVKGMGKYKIAPRLRTFD 271
            ++ GF IF+ M+++ + P EATIT+VARLAAAK DG+ AF++V+ MGKY+++PRLRT+ 
Sbjct: 70  ALDYGFRIFDHMVNSGVTPNEATITAVARLAAAKSDGDLAFEVVRTMGKYELSPRLRTYG 129

Query: 270 PALLLFCGNKDVDKAYEVEEYMSTLGIQLEELEIGALLKVSGEVGRVEKVYEYLHMLRSC 91
           PAL  FC N + +KA+ VEE+M ++G+  EE E+ ALLKVS E+GR +KVY YLH LR+ 
Sbjct: 130 PALYWFCANLEGEKAWAVEEHMVSMGVHPEEPELAALLKVSAEMGRGDKVYAYLHKLRTA 189

Query: 90  VRCVKVSSAQIIEGWFGSEIAAEVGRVD 7
           VR V  S+A+IIEGWF  E A+EVG VD
Sbjct: 190 VRSVSESTAEIIEGWFCGEAASEVGGVD 217


>ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 530

 Score =  223 bits (569), Expect = 6e-56
 Identities = 117/212 (55%), Positives = 149/212 (70%), Gaps = 2/212 (0%)
 Frame = -1

Query: 630 FMYELGTCSKHNNLQGALSLYETALSQNLRFNHNHYNTLIYLCSNSLTNTTNQHDDLLLL 451
           F +EL TCSK  +L+GA+SLY+ A+S N R N +H+N L+YLCSNS+ + +     L   
Sbjct: 20  FQFELNTCSKAKDLRGAISLYDDAVSNNTRLNQHHFNALLYLCSNSVADPS-----LKPT 74

Query: 450 TIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGEFAFQLVKGMGK-YKIA-PRLRT 277
            ++ GF  F  M +  + P EAT+T+VARLAAAKGD ++AF LVK MGK Y  A PRLRT
Sbjct: 75  ALDYGFRAFCHMSALAVLPNEATVTAVARLAAAKGDADYAFDLVKSMGKNYNNALPRLRT 134

Query: 276 FDPALLLFCGNKDVDKAYEVEEYMSTLGIQLEELEIGALLKVSGEVGRVEKVYEYLHMLR 97
           +DPAL  FC   D DKAYEVEE+MS +G+ LEE E+ ALLKVS   GR +KVYEYLH LR
Sbjct: 135 YDPALFCFCEMLDADKAYEVEEHMSGVGVSLEEAEVAALLKVSARCGRADKVYEYLHKLR 194

Query: 96  SCVRCVKVSSAQIIEGWFGSEIAAEVGRVDWD 1
           S VRCV  SSA +IE WF    ++EVG V+++
Sbjct: 195 SSVRCVSESSAVVIEEWFRGSKSSEVGEVEFE 226


>emb|CAN79022.1| hypothetical protein VITISV_022893 [Vitis vinifera]
          Length = 509

 Score =  223 bits (569), Expect = 6e-56
 Identities = 109/208 (52%), Positives = 154/208 (74%)
 Frame = -1

Query: 630 FMYELGTCSKHNNLQGALSLYETALSQNLRFNHNHYNTLIYLCSNSLTNTTNQHDDLLLL 451
           F ++L TCSK  +L GA++L+E+A+SQN R  H H+N L+YLC+ S+   +++      L
Sbjct: 15  FRFDLDTCSKRRDLSGAVALFESAVSQNFRLIHYHFNALLYLCTISIDEPSSK-----AL 69

Query: 450 TIEKGFTIFNRMLSNNINPTEATITSVARLAAAKGDGEFAFQLVKGMGKYKIAPRLRTFD 271
            ++ GF IF+ M+++ + P EATIT+VARLAAAK DG+ AF++V+ MGKY+++PRLRT+ 
Sbjct: 70  ALDYGFRIFDHMVNSGVTPNEATITAVARLAAAKSDGDLAFEVVRTMGKYELSPRLRTYG 129

Query: 270 PALLLFCGNKDVDKAYEVEEYMSTLGIQLEELEIGALLKVSGEVGRVEKVYEYLHMLRSC 91
           PAL  FC N + +KA+ VEE+M ++G+  EE E+ ALLKVS E+GR +KVY YLH LR+ 
Sbjct: 130 PALYWFCANLEGEKAWAVEEHMVSMGVHPEEPELAALLKVSAEMGRGDKVYAYLHKLRTA 189

Query: 90  VRCVKVSSAQIIEGWFGSEIAAEVGRVD 7
           VR V  S+A+IIEGWF  E A+EVG VD
Sbjct: 190 VRSVSESTAEIIEGWFCGEAASEVGGVD 217