BLASTX nr result

ID: Coptis21_contig00007028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007028
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552957.1| PREDICTED: U-box domain-containing protein 4...    94   1e-17
ref|XP_003538403.1| PREDICTED: U-box domain-containing protein 4...    92   4e-17
ref|XP_003545263.1| PREDICTED: U-box domain-containing protein 4...    90   2e-16
ref|XP_002273909.1| PREDICTED: U-box domain-containing protein 4...    89   3e-16
ref|XP_002305204.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16

>ref|XP_003552957.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 384

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/53 (84%), Positives = 50/53 (94%)
 Frame = -3

Query: 337 ENIVYNIVSQIDGEDPGGKAKKMLADMVQVSMEQSLRHLQQRALVCTPTDLPL 179
           ENIV NI+SQIDG+D  GKAKKMLA+MVQVSMEQSLRHLQQRALVCTP+DLP+
Sbjct: 321 ENIVCNIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPSDLPI 373


>ref|XP_003538403.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 392

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 44/53 (83%), Positives = 50/53 (94%)
 Frame = -3

Query: 337 ENIVYNIVSQIDGEDPGGKAKKMLADMVQVSMEQSLRHLQQRALVCTPTDLPL 179
           ENIV +I+SQIDG+D  GKAKKMLA+MVQVSMEQSLRHLQQRALVCTP+DLP+
Sbjct: 329 ENIVCSIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPSDLPI 381


>ref|XP_003545263.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 371

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 42/53 (79%), Positives = 50/53 (94%)
 Frame = -3

Query: 337 ENIVYNIVSQIDGEDPGGKAKKMLADMVQVSMEQSLRHLQQRALVCTPTDLPL 179
           ENIV +I+SQIDG+D  GKAKKMLA+MVQVSMEQSLRHLQQRALVCTP+++P+
Sbjct: 308 ENIVCDIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPSEMPI 360


>ref|XP_002273909.1| PREDICTED: U-box domain-containing protein 4 [Vitis vinifera]
           gi|147807233|emb|CAN61950.1| hypothetical protein
           VITISV_002189 [Vitis vinifera]
          Length = 378

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 43/53 (81%), Positives = 48/53 (90%)
 Frame = -3

Query: 337 ENIVYNIVSQIDGEDPGGKAKKMLADMVQVSMEQSLRHLQQRALVCTPTDLPL 179
           ENIV N++SQID ED   KAKKMLA+MVQVSMEQSLRHLQQRA+VCTPTDLP+
Sbjct: 316 ENIVCNLISQIDSEDQSRKAKKMLAEMVQVSMEQSLRHLQQRAVVCTPTDLPI 368


>ref|XP_002305204.1| predicted protein [Populus trichocarpa] gi|222848168|gb|EEE85715.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/55 (81%), Positives = 50/55 (90%), Gaps = 2/55 (3%)
 Frame = -3

Query: 337 ENIVYNIVSQIDGEDPGGKAKKMLADMVQVSMEQSLRHLQQRALVCTPT--DLPL 179
           ENIV NI+SQIDG++  GKAKKMLA+MVQVSMEQSLRHLQQRALVCTPT  DLP+
Sbjct: 325 ENIVCNIISQIDGDEQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPTPNDLPI 379


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