BLASTX nr result
ID: Coptis21_contig00007027
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00007027
(1875 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydro... 180 4e-99
ref|XP_004142174.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 178 7e-97
ref|XP_002267555.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 169 7e-97
ref|XP_002277700.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 172 5e-96
dbj|BAF98601.1| CM0545.290.nc [Lotus japonicus] 177 9e-96
>ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
vinifera] gi|296084432|emb|CBI24991.3| unnamed protein
product [Vitis vinifera]
Length = 1115
Score = 180 bits (456), Expect(3) = 4e-99
Identities = 105/196 (53%), Positives = 124/196 (63%), Gaps = 1/196 (0%)
Frame = -2
Query: 1301 NINSWERLCQDIYGAQIGY-DILSIIHLMFLS*VVHFRSLTKPKEDAFCLQLSNIFNYDE 1125
+I ++RL Q Q Y D+ S + + VV FRSL KPKED FCL+LS +FNYD+
Sbjct: 768 DIICYQRLLQIDSSQQCRYPDVPSFLEYVHNRQVVRFRSLEKPKEDEFCLELSKLFNYDD 827
Query: 1124 VVESVARQLLVDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHLSHMLVQNNQTAH 945
VVE VA L +D S +HLS ML+ NQT+
Sbjct: 828 VVERVAAHLGLDDSSKIRLTSHNCYSQQPKPQPIKYRGV------EHLSDMLLHYNQTSD 881
Query: 944 ILYYEVLDIPLPELEC*KTLEVSFHHATKEEVVKHCITLPEHSTVADLISDLKRKVELSH 765
ILYYEVLDIPLPEL+ KTL+V+FHHATKEEVV H I LP+ STV D+I+DLK KVELSH
Sbjct: 882 ILYYEVLDIPLPELQGLKTLKVAFHHATKEEVVIHTIRLPKQSTVGDVINDLKSKVELSH 941
Query: 764 PNVELRLLEVFYHKIY 717
PN ELRLLEVFYHKIY
Sbjct: 942 PNAELRLLEVFYHKIY 957
Score = 150 bits (380), Expect(3) = 4e-99
Identities = 73/99 (73%), Positives = 83/99 (83%), Gaps = 1/99 (1%)
Frame = -3
Query: 727 IKSIFQTSETIENINDQNWTLRAEEIPEEEKNCGAHDHIIHVYHFTKESSQNQLQVQNFG 548
I IF +E IENINDQ WTLRAEEIPEEEKN G HD +IHVYHF K+++QNQ+QVQNFG
Sbjct: 956 IYKIFPLNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFMKDTTQNQVQVQNFG 1015
Query: 547 EPFFLIIRDGETLAEVKVRIQKKLRVP-VPVSKWKFVYL 434
EPFFL+I +GETLAEVKVRIQKKL+VP SKWKF +L
Sbjct: 1016 EPFFLVIHEGETLAEVKVRIQKKLQVPDEEFSKWKFAFL 1054
Score = 80.9 bits (198), Expect(3) = 4e-99
Identities = 36/50 (72%), Positives = 44/50 (88%)
Frame = -1
Query: 441 YISLGRAEYLQDTDIVSTRFQRRELFAPWEQYLGLEHSDIAPNRLHAANQ 292
++SLGR EYLQD+DIVS+RFQRR+++ WEQYLGLEHSD AP R +AANQ
Sbjct: 1053 FLSLGRPEYLQDSDIVSSRFQRRDVYGAWEQYLGLEHSDNAPKRSYAANQ 1102
>ref|XP_004142174.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like [Cucumis
sativus] gi|449503435|ref|XP_004162001.1| PREDICTED:
ubiquitin carboxyl-terminal hydrolase 13-like [Cucumis
sativus]
Length = 1118
Score = 178 bits (452), Expect(3) = 7e-97
Identities = 98/176 (55%), Positives = 117/176 (66%)
Frame = -2
Query: 1244 DILSIIHLMFLS*VVHFRSLTKPKEDAFCLQLSNIFNYDEVVESVARQLLVDVSXXXXXX 1065
D+ S + + VVHFRSL KPKED FCL++S ++ YDEVVE +A+QL VD
Sbjct: 791 DVPSFLEYVHNRQVVHFRSLEKPKEDDFCLEMSKLYTYDEVVERLAQQLGVD------DP 844
Query: 1064 XXXXXXXXXXXXXXXXXXXXXXXXXDHLSHMLVQNNQTAHILYYEVLDIPLPELEC*KTL 885
+HLS MLV NQT+ ILYYEVLDIPLPEL+ KTL
Sbjct: 845 SKIRLTSHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTL 904
Query: 884 EVSFHHATKEEVVKHCITLPEHSTVADLISDLKRKVELSHPNVELRLLEVFYHKIY 717
+V+FHHATK+EVV H I LP+ STVAD+I+DLK KVELSHP+ ELRLLEVFYHKIY
Sbjct: 905 KVAFHHATKDEVVIHTIRLPKQSTVADVINDLKTKVELSHPDAELRLLEVFYHKIY 960
Score = 146 bits (368), Expect(3) = 7e-97
Identities = 67/99 (67%), Positives = 84/99 (84%), Gaps = 1/99 (1%)
Frame = -3
Query: 727 IKSIFQTSETIENINDQNWTLRAEEIPEEEKNCGAHDHIIHVYHFTKESSQNQLQVQNFG 548
I +F +E IENINDQ WTLRAEEIPEEEKN G +D +IHVYHFTK+++QNQ+Q+QNFG
Sbjct: 959 IYKVFPPNEKIENINDQYWTLRAEEIPEEEKNLGPNDRLIHVYHFTKDTAQNQMQIQNFG 1018
Query: 547 EPFFLIIRDGETLAEVKVRIQKKLRVP-VPVSKWKFVYL 434
EPFFL+I +GETLA++K+RIQKKL+VP +KWKF +L
Sbjct: 1019 EPFFLVINEGETLADIKLRIQKKLQVPDEEFAKWKFAFL 1057
Score = 79.7 bits (195), Expect(3) = 7e-97
Identities = 35/50 (70%), Positives = 42/50 (84%)
Frame = -1
Query: 441 YISLGRAEYLQDTDIVSTRFQRRELFAPWEQYLGLEHSDIAPNRLHAANQ 292
++SLGR EYLQDTDIVS RFQRR+++ WEQYLGLEH+D AP R + ANQ
Sbjct: 1056 FLSLGRPEYLQDTDIVSNRFQRRDVYGAWEQYLGLEHTDNAPKRAYTANQ 1105
>ref|XP_002267555.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
vinifera]
Length = 1117
Score = 169 bits (429), Expect(3) = 7e-97
Identities = 92/176 (52%), Positives = 115/176 (65%)
Frame = -2
Query: 1244 DILSIIHLMFLS*VVHFRSLTKPKEDAFCLQLSNIFNYDEVVESVARQLLVDVSXXXXXX 1065
D+ S + + VVHFR+L +PKED FCL+LS + NYD+VVE VAR+L +D
Sbjct: 790 DVTSFLEYVQNRQVVHFRALERPKEDDFCLELSKLHNYDDVVERVARRLGLD------DP 843
Query: 1064 XXXXXXXXXXXXXXXXXXXXXXXXXDHLSHMLVQNNQTAHILYYEVLDIPLPELEC*KTL 885
+HLS MLV NQ++ ILYYEVLDIPLPEL+ K L
Sbjct: 844 SKIRLTSHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQSSDILYYEVLDIPLPELQGLKNL 903
Query: 884 EVSFHHATKEEVVKHCITLPEHSTVADLISDLKRKVELSHPNVELRLLEVFYHKIY 717
+V+FHHATK++V+ H I LP+ STV D+I++LK KVELSHPN ELRLLEVFYHKIY
Sbjct: 904 KVAFHHATKDDVIIHNIRLPKQSTVGDVINELKTKVELSHPNAELRLLEVFYHKIY 959
Score = 152 bits (385), Expect(3) = 7e-97
Identities = 76/99 (76%), Positives = 82/99 (82%), Gaps = 1/99 (1%)
Frame = -3
Query: 727 IKSIFQTSETIENINDQNWTLRAEEIPEEEKNCGAHDHIIHVYHFTKESSQNQLQVQNFG 548
I IF SE IENINDQ WTLRAEEIPEEEKN G HD +IHVYHFTKE+ QNQ+QVQNFG
Sbjct: 958 IYKIFPPSEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKETVQNQMQVQNFG 1017
Query: 547 EPFFLIIRDGETLAEVKVRIQKKLRVP-VPVSKWKFVYL 434
EPFFLII +GETLAEVK RIQKKL+VP SKWKF +L
Sbjct: 1018 EPFFLIIHEGETLAEVKERIQKKLQVPDEEFSKWKFAFL 1056
Score = 82.0 bits (201), Expect(3) = 7e-97
Identities = 36/50 (72%), Positives = 44/50 (88%)
Frame = -1
Query: 441 YISLGRAEYLQDTDIVSTRFQRRELFAPWEQYLGLEHSDIAPNRLHAANQ 292
++SLGR EYLQD+DIVS+RFQRR+++ WEQYLGLEHSD AP R +AANQ
Sbjct: 1055 FLSLGRPEYLQDSDIVSSRFQRRDVYGAWEQYLGLEHSDTAPKRAYAANQ 1104
>ref|XP_002277700.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Vitis vinifera]
gi|296084015|emb|CBI24403.3| unnamed protein product
[Vitis vinifera]
Length = 1116
Score = 172 bits (436), Expect(3) = 5e-96
Identities = 95/176 (53%), Positives = 112/176 (63%)
Frame = -2
Query: 1244 DILSIIHLMFLS*VVHFRSLTKPKEDAFCLQLSNIFNYDEVVESVARQLLVDVSXXXXXX 1065
D+ S + + VVHFRSL KPKED FCL++S +F YD+VVE VARQL +D
Sbjct: 789 DVPSFLEYVHNRQVVHFRSLEKPKEDDFCLEMSKLFTYDDVVERVARQLGLD------DP 842
Query: 1064 XXXXXXXXXXXXXXXXXXXXXXXXXDHLSHMLVQNNQTAHILYYEVLDIPLPELEC*KTL 885
DHLS MLV N + +LYYEVLDIPLPEL+ KTL
Sbjct: 843 SKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNLISDVLYYEVLDIPLPELQGLKTL 902
Query: 884 EVSFHHATKEEVVKHCITLPEHSTVADLISDLKRKVELSHPNVELRLLEVFYHKIY 717
+V+FHHA KEEVV H I LP+ STV D+I+ LK KVELSHPN E+RLLEVFYHKIY
Sbjct: 903 KVAFHHAEKEEVVSHSIRLPKQSTVGDVINALKTKVELSHPNAEVRLLEVFYHKIY 958
Score = 147 bits (370), Expect(3) = 5e-96
Identities = 69/99 (69%), Positives = 83/99 (83%), Gaps = 1/99 (1%)
Frame = -3
Query: 727 IKSIFQTSETIENINDQNWTLRAEEIPEEEKNCGAHDHIIHVYHFTKESSQNQLQVQNFG 548
I +F ++E IENINDQ WTLRAEEIPEEEKN G D +IHVYHFTK+++QNQ+Q+QNFG
Sbjct: 957 IYKVFPSNEKIENINDQYWTLRAEEIPEEEKNLGPQDRLIHVYHFTKDTAQNQMQIQNFG 1016
Query: 547 EPFFLIIRDGETLAEVKVRIQKKLRVP-VPVSKWKFVYL 434
EPFFL+I +GETLAEVKVRIQKKL VP +KW+F +L
Sbjct: 1017 EPFFLVIHEGETLAEVKVRIQKKLLVPEEEFAKWRFAFL 1055
Score = 82.0 bits (201), Expect(3) = 5e-96
Identities = 36/50 (72%), Positives = 44/50 (88%)
Frame = -1
Query: 441 YISLGRAEYLQDTDIVSTRFQRRELFAPWEQYLGLEHSDIAPNRLHAANQ 292
++SLGR EYLQD+DIVS+RFQRR+++ WEQYLGLEHSD AP R +AANQ
Sbjct: 1054 FLSLGRPEYLQDSDIVSSRFQRRDVYGAWEQYLGLEHSDTAPKRAYAANQ 1103
>dbj|BAF98601.1| CM0545.290.nc [Lotus japonicus]
Length = 1118
Score = 177 bits (448), Expect(3) = 9e-96
Identities = 95/176 (53%), Positives = 115/176 (65%)
Frame = -2
Query: 1244 DILSIIHLMFLS*VVHFRSLTKPKEDAFCLQLSNIFNYDEVVESVARQLLVDVSXXXXXX 1065
D+ S + + VVHFRSL KPKED FCL++S ++ YD+VVE VA+QL +D
Sbjct: 791 DVPSYLEYVHNRQVVHFRSLDKPKEDDFCLEMSRLYTYDDVVEKVAQQLNLD------DP 844
Query: 1064 XXXXXXXXXXXXXXXXXXXXXXXXXDHLSHMLVQNNQTAHILYYEVLDIPLPELEC*KTL 885
DHLS MLV NQT+ ILYYE+LDIPLPEL+ KTL
Sbjct: 845 SKIRLTPHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEILDIPLPELQGLKTL 904
Query: 884 EVSFHHATKEEVVKHCITLPEHSTVADLISDLKRKVELSHPNVELRLLEVFYHKIY 717
+V+F+HATK+EVV H I LP+ STV D++ DLK KVELSHPN ELRLLEVFYHKIY
Sbjct: 905 KVAFYHATKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHPNAELRLLEVFYHKIY 960
Score = 147 bits (372), Expect(3) = 9e-96
Identities = 68/98 (69%), Positives = 81/98 (82%), Gaps = 1/98 (1%)
Frame = -3
Query: 727 IKSIFQTSETIENINDQNWTLRAEEIPEEEKNCGAHDHIIHVYHFTKESSQNQLQVQNFG 548
I +F +E IE INDQ WTLRAEE+PEEEKN G HD +IHVYHFTK++SQNQ+Q+QNFG
Sbjct: 959 IYKVFPPNEKIETINDQYWTLRAEEVPEEEKNLGPHDRLIHVYHFTKDTSQNQMQIQNFG 1018
Query: 547 EPFFLIIRDGETLAEVKVRIQKKLRVP-VPVSKWKFVY 437
EPFFL+IR+GETL E+KVRIQKKL+VP KWKF +
Sbjct: 1019 EPFFLVIREGETLTEIKVRIQKKLQVPDDEFEKWKFAF 1056
Score = 75.9 bits (185), Expect(3) = 9e-96
Identities = 33/50 (66%), Positives = 41/50 (82%)
Frame = -1
Query: 441 YISLGRAEYLQDTDIVSTRFQRRELFAPWEQYLGLEHSDIAPNRLHAANQ 292
+ +LGR EYLQD+DIVS RFQRR+++ WEQYLGLEH+D AP R +A NQ
Sbjct: 1056 FFALGRPEYLQDSDIVSNRFQRRDVYGAWEQYLGLEHTDNAPKRSYAVNQ 1105