BLASTX nr result

ID: Coptis21_contig00007022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007022
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616194.1| Pre-mRNA-splicing factor 38B [Medicago trunc...   211   2e-52
ref|XP_003544972.1| PREDICTED: uncharacterized protein LOC100793...   209   5e-52
ref|XP_003519321.1| PREDICTED: uncharacterized protein LOC100788...   208   1e-51
ref|XP_003631851.1| PREDICTED: uncharacterized protein LOC100267...   206   6e-51
emb|CBI28632.3| unnamed protein product [Vitis vinifera]              206   6e-51

>ref|XP_003616194.1| Pre-mRNA-splicing factor 38B [Medicago truncatula]
           gi|355517529|gb|AES99152.1| Pre-mRNA-splicing factor 38B
           [Medicago truncatula]
          Length = 433

 Score =  211 bits (536), Expect = 2e-52
 Identities = 97/125 (77%), Positives = 115/125 (92%)
 Frame = -3

Query: 494 KEFAPGSNGRLTTMGVYVRDLLLGQYYFDTLFPRTPVPVMRQIAANLERMKLPSTHSGVT 315
           +EF+PGSNGR+TTMGVY+RDLLLGQYYFDTLFPR PVPVMRQ+ ANLE++KLP+TH G T
Sbjct: 123 EEFSPGSNGRMTTMGVYIRDLLLGQYYFDTLFPRIPVPVMRQVVANLEKLKLPTTHCGTT 182

Query: 314 GENSRHGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPLHERDNSDDIQK 135
           GE +RHGS+DTARRPPSVKAALSVSFGQRAPHRASTRDSSP+RRT+P  HE++ +DDI++
Sbjct: 183 GETTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTVPAPHEKNGTDDIRR 242

Query: 134 SLSKY 120
           S S +
Sbjct: 243 SPSNH 247


>ref|XP_003544972.1| PREDICTED: uncharacterized protein LOC100793812 [Glycine max]
          Length = 444

 Score =  209 bits (532), Expect = 5e-52
 Identities = 100/123 (81%), Positives = 115/123 (93%)
 Frame = -3

Query: 494 KEFAPGSNGRLTTMGVYVRDLLLGQYYFDTLFPRTPVPVMRQIAANLERMKLPSTHSGVT 315
           +EF+PGSNGR+TTMGVYVRDLLLGQYYFDTLFPR PVPV+RQ+ +NLE++KLPSTHSG T
Sbjct: 123 EEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSTHSGST 182

Query: 314 GENSRHGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPLHERDNSDDIQK 135
           GE +RHGS+DTARRPPSVKAALSVSFGQRAPHRASTRDSSP+RRTLP  HE++ SDDI++
Sbjct: 183 GETTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTLPS-HEKNGSDDIRR 241

Query: 134 SLS 126
           S S
Sbjct: 242 SPS 244


>ref|XP_003519321.1| PREDICTED: uncharacterized protein LOC100788237 [Glycine max]
          Length = 428

 Score =  208 bits (529), Expect = 1e-51
 Identities = 99/123 (80%), Positives = 115/123 (93%)
 Frame = -3

Query: 494 KEFAPGSNGRLTTMGVYVRDLLLGQYYFDTLFPRTPVPVMRQIAANLERMKLPSTHSGVT 315
           +EF+PGSNGR+TTMGVYVRDLLLGQYYFDTLFPR PVPV+RQ+ +NLE++KLP+THSG T
Sbjct: 123 EEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPTTHSGST 182

Query: 314 GENSRHGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPLHERDNSDDIQK 135
           GE +RHGS+DTARRPPSVKAALSVSFGQRAPHRASTRDSSP+RRTLP  HE++ SDDI++
Sbjct: 183 GETTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTLPS-HEKNGSDDIRR 241

Query: 134 SLS 126
           S S
Sbjct: 242 SPS 244


>ref|XP_003631851.1| PREDICTED: uncharacterized protein LOC100267328 isoform 2 [Vitis
           vinifera]
          Length = 407

 Score =  206 bits (523), Expect = 6e-51
 Identities = 99/126 (78%), Positives = 115/126 (91%), Gaps = 3/126 (2%)
 Frame = -3

Query: 494 KEFAPGSNGRLTTMGVYVRDLLLGQYYFDTLFPRTPVPVMRQIAANLERMKLPSTHSGVT 315
           +EF+PGS GR+TTMG YVRDLLLGQYYFDTLFPR PVP+MRQI ANLE+MKLPS H+GVT
Sbjct: 123 EEFSPGSTGRMTTMGAYVRDLLLGQYYFDTLFPRIPVPIMRQIVANLEKMKLPSKHAGVT 182

Query: 314 GENSRHGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTL---PPLHERDNSDD 144
           G+ +RHGS+DTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTL   PP ++R++SDD
Sbjct: 183 GDTTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPPPSYDRNSSDD 242

Query: 143 IQKSLS 126
           +++S S
Sbjct: 243 LRRSPS 248


>emb|CBI28632.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score =  206 bits (523), Expect = 6e-51
 Identities = 99/126 (78%), Positives = 115/126 (91%), Gaps = 3/126 (2%)
 Frame = -3

Query: 494 KEFAPGSNGRLTTMGVYVRDLLLGQYYFDTLFPRTPVPVMRQIAANLERMKLPSTHSGVT 315
           +EF+PGS GR+TTMG YVRDLLLGQYYFDTLFPR PVP+MRQI ANLE+MKLPS H+GVT
Sbjct: 123 EEFSPGSTGRMTTMGAYVRDLLLGQYYFDTLFPRIPVPIMRQIVANLEKMKLPSKHAGVT 182

Query: 314 GENSRHGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTL---PPLHERDNSDD 144
           G+ +RHGS+DTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTL   PP ++R++SDD
Sbjct: 183 GDTTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPPPSYDRNSSDD 242

Query: 143 IQKSLS 126
           +++S S
Sbjct: 243 LRRSPS 248


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