BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007001
         (955 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...   125   2e-26
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...   113   6e-23
ref|XP_002532277.1| conserved hypothetical protein [Ricinus comm...   103   6e-20
ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-19
ref|XP_002534512.1| conserved hypothetical protein [Ricinus comm...    98   3e-18

>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
            gi|222861279|gb|EEE98821.1| f-box family protein [Populus
            trichocarpa]
          Length = 422

 Score =  125 bits (313), Expect = 2e-26
 Identities = 105/356 (29%), Positives = 162/356 (45%), Gaps = 39/356 (10%)
 Frame = -2

Query: 954  CKTWYKLAHHPRFAEIHYKWAIQNCCTPCVVL-CD-PI-GIFWLIDHQVFDNFETSPPVQ 784
            C+ W  L   P+  +++   + Q+   PC++L CD PI    + +D    +  +      
Sbjct: 52   CRAWRALVQDPQLVDLYLSCSTQDTDHPCLILHCDFPIRNNLYFVDFAAHEEEKEKVKRI 111

Query: 783  CLDFLNE-PEFQPNLGVIGFVNGLLCLSENPLLCDYPVFYYICNPFTGEHIALPRACGLE 607
               F +  PEF+    V+G  NGLLCLS++     Y    YI NPFTG +  LP++    
Sbjct: 112  PAPFSSMMPEFE----VVGSCNGLLCLSDSL----YNDSLYIYNPFTGCYKELPKSLQYP 163

Query: 606  IVQL-SAFGFDSNTSQYKVIRFYYERN----------------EGEVFTLGSSRWRRIEK 478
              ++ S FGF+  T +YKVIR  Y RN                E ++ TLG   WR + K
Sbjct: 164  DQEVVSGFGFNPKTKEYKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGCPEWRSLGK 223

Query: 477  GVPKTTLQYPYGMYVSNHLHWIS--CGDDSPLRIVAFNMAAEDVHEIQPPTLVGQDVTHN 304
             V    ++   G  V+  LHWIS  C +    R+V+F++  E   E+  P   G +   N
Sbjct: 224  -VSYRLVRRASGALVNGRLHWISRPCRNKPARRLVSFDLTDEQFREVSKPDCGGLNRC-N 281

Query: 303  VSLGVIEERLGLFCERNFDNVCYEIWVMKDYGMQGSWAKEYFFSPEVAKCLSDSS----- 139
              L V+   L      N+  +  EIWVMK+Y ++ SW KEY     + K L  +      
Sbjct: 282  YHLVVLRGCLSAAVYCNYGRL--EIWVMKEYNVKESWVKEYNIGAYMPKGLKQNQDRQLK 339

Query: 138  ----------AHTVTKLRNGEFLVQYDWGCLGYYDPKQETCRPIVVERA-SWIRSI 4
                         +  L+NGE L++Y    L  YDPK    + I ++ A +W +++
Sbjct: 340  IWKNSSNGRVVGALCVLKNGEILLEYKNRVLVSYDPKNGKFKDIELQGAPNWFQTV 395


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
            gi|222843314|gb|EEE80861.1| f-box family protein [Populus
            trichocarpa]
          Length = 408

 Score =  113 bits (283), Expect = 6e-23
 Identities = 99/356 (27%), Positives = 160/356 (44%), Gaps = 39/356 (10%)
 Frame = -2

Query: 954  CKTWYKLAHHPRFAEIHYKWAIQNCCTPCVVL-CDPIGIFWLIDHQVFDNFET-SPPVQC 781
            C+ W  +A  P    ++   + Q    PCV+L CD    F + ++  F +F       + 
Sbjct: 52   CRAWRAMALDPEVVNLYLSCSTQET-DPCVILHCD----FPIRNNLYFVDFAAHEEEKEK 106

Query: 780  LDFLNEP--EFQPNLGVIGFVNGLLCLSENPLLCDYPVFYYICNPFTGEHIALPRACGLE 607
            +  +  P     P   V+G  NGLLCLS++ L  D     YI NPFTG +  LP++    
Sbjct: 107  VKRIRAPFSSMMPEFEVVGSCNGLLCLSDS-LFNDS---LYIYNPFTGRYKELPKSLQYP 162

Query: 606  IVQLS-AFGFDSNTSQYKVIRFYYERN----------------EGEVFTLGSSRWRRIEK 478
              ++   FGF+  T++YKVIR  Y RN                + ++ TLG   WR + K
Sbjct: 163  DQEVVFGFGFNPKTNEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGCPGWRSLGK 222

Query: 477  GVPKTTLQYPYGMYVSNHLHWIS--CGDDSPLRIVAFNMAAEDVHEIQPPTLVGQDVTHN 304
             V    ++      V+  LHW+S  C +    R+V+F++  E   E+  P   G +   +
Sbjct: 223  -VSYRLVRRASETLVNGRLHWVSRPCRNKPARRLVSFDLTDEQFREVPKPDCGGLNRC-D 280

Query: 303  VSLGVIEERLGLFCERNFDNVCYEIWVMKDYGMQGSWAKEYFFSPEVAKCLSDS------ 142
              L V+   L +    N+  +  EIWVMK+Y ++ SW KEY     + K L  +      
Sbjct: 281  YHLAVLRGCLSVAVYCNYGRL--EIWVMKEYNVKESWVKEYNIGAYMPKGLKQNLVRPLK 338

Query: 141  ---------SAHTVTKLRNGEFLVQYDWGCLGYYDPKQETCRPIVVE-RASWIRSI 4
                     +   +  L+NGE L++Y    L  YDPK+   + I ++    W +++
Sbjct: 339  IWKNASNGRAVRALCVLKNGEILLEYKNRALVSYDPKKGKFKDIDLQGTPKWFQTV 394


>ref|XP_002532277.1| conserved hypothetical protein [Ricinus communis]
            gi|223528011|gb|EEF30092.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 410

 Score =  103 bits (257), Expect = 6e-20
 Identities = 102/362 (28%), Positives = 154/362 (42%), Gaps = 54/362 (14%)
 Frame = -2

Query: 954  CKTWYKLAHHPRFAEIHYKWAIQNCCTPCVVL-CD-PIGI------FWLIDHQVFDNFET 799
            C+ W  L  HP  A +H+   I N   PC++L CD PI        F  +D  + +   T
Sbjct: 50   CRFWRSLVQHPLLASMHFS-RIANNNDPCLLLLCDLPIKSHLYSLHFSALDETIIETV-T 107

Query: 798  SPPVQCLDFLNEPEFQPNLGVIGFVNGLLCLSENPLLCDYPVFYYICNPFTGEHIALPRA 619
              PV  +         P   VIG  NGLL L ++          YI NPFT +++ LP  
Sbjct: 108  RIPVPVI---------PKFLVIGSCNGLLYLLDSL----QQRANYIYNPFTSDYLELPEP 154

Query: 618  CGLEIVQ---LSAFGFDSNTSQYKVIRFYYERN------------------EGEVFTLGS 502
             G  + Q    + FGF S T +YKV+R  Y RN                  E +V T+G+
Sbjct: 155  -GQVLNQHRVATGFGFHSTTKEYKVVRVVYYRNNKEEGTNFQKRRYSLPRSEVQVLTVGN 213

Query: 501  SRWRRIEKGVPK-TTLQYPYGMYVSNHLHWISCG--DDSPLRIVAFNMAAEDVHEIQPPT 331
                   KG      L  P  + V+  LHW+SC   + S  R+++F++A E   E+  P 
Sbjct: 214  GSLTWRSKGETSYQLLGNPSHVVVNGRLHWLSCRYRNQSLRRLISFDLADEQFREVPCPV 273

Query: 330  --LVGQDVTHNVSL-----GVIEERLGLFCERNFDNVCYEIWVMKDYGMQGSWAKEYFFS 172
                G+  +H  +L     GV++    L+           IWVMK+YG++ SW KE+   
Sbjct: 274  GASFGRHCSHLATLRGCLSGVVQGFRRLY-----------IWVMKEYGVKESWVKEFTIG 322

Query: 171  PEVAKCLSD---------------SSAHTVTKLRNGEFLVQYDWGCLGYYDPKQETCRPI 37
             ++ + L                 S    +  L NGE L+++  G L  YD K    + +
Sbjct: 323  VKLPRELEPYPNQSINLQEFHLPLSQTKVLCLLNNGEILLEFRCGTLVCYDTKSGAFKEL 382

Query: 36   VV 31
            ++
Sbjct: 383  II 384


>ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|222860326|gb|EEE97873.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score =  102 bits (253), Expect = 2e-19
 Identities = 70/245 (28%), Positives = 119/245 (48%), Gaps = 19/245 (7%)
 Frame = -2

Query: 738 VIGFVNGLLCLSENPLLCDYPVFYYICNPFTGEHIALPRACGLE-------IVQLSAFGF 580
           ++G  NGLLCL +     +    +Y+CNP TGEH+  P  C  E       +  +  FGF
Sbjct: 127 LVGSCNGLLCLFDK----NSKKVFYLCNPVTGEHVRTPANCKKEKQRGKTILDAVLGFGF 182

Query: 579 DSNTSQYKVIRFYYE---------RNEGEVFTLGSSRWRRIEKGVPKTTLQYPYGMYVSN 427
              ++ Y V+R   +         R+EGE+   G + W+ I + +P    +  +G+ ++ 
Sbjct: 183 SPKSNHYMVLRITRKKLTYPISILRSEGEICIFGDNEWKSIGE-IPFPDCKKFFGVSLNG 241

Query: 426 HLHWISCGDD--SPLRIVAFNMAAEDVHEIQPPTLVGQDVTHNVSLGVIEERLGLFCERN 253
            LHWI   DD      I A ++ ++ +  + PP    +D T  ++LGV+ + L +     
Sbjct: 242 ALHWILNLDDYEDADLICALDIDSKKIRPMSPPNGFRRDTT-EMTLGVLRDCLFICDSMT 300

Query: 252 FDNVCYEIWVMKDYGMQGSWAKEYFFS-PEVAKCLSDSSAHTVTKLRNGEFLVQYDWGCL 76
             N+  +IWVMK+YG++ SW KE   +   +   L +S    +   ++GE L+  D    
Sbjct: 301 LYNL--DIWVMKEYGVKDSWTKEIVIAKTSLPSNLQNSFLQPIMVSKDGEVLISSDSNVF 358

Query: 75  GYYDP 61
            +YDP
Sbjct: 359 VWYDP 363


>ref|XP_002534512.1| conserved hypothetical protein [Ricinus communis]
            gi|223525141|gb|EEF27869.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 383

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 93/353 (26%), Positives = 154/353 (43%), Gaps = 45/353 (12%)
 Frame = -2

Query: 954  CKTWYKLAHHPRFAEIHYKWAIQNCCTPCVVLC------DPIGIFWLIDHQVF-DNFETS 796
            C++W  LA  P   ++H+   I+N   PC++L       + +    L  H    D     
Sbjct: 38   CQSWRNLAQDPLLVDLHFSHKIEN--NPCLILHSDHPTKNQLYALCLYPHNTSQDGMVMK 95

Query: 795  PPVQCLDFLNEPEFQPNLGVIGFVNGLLCLSENPLLCDYPVFYYICNPFTGEHIALPRA- 619
             PV       + EF     V+G   G LCL ++     +   +Y+ NPFT   + LP + 
Sbjct: 96   IPVPV-----KLEFD----VVGSCKGWLCLYDSL----HKNTFYMYNPFTNSCMELPISN 142

Query: 618  CGLEIVQLSAFGFDSNTSQYKVIRFYYER---------------NEGEVFTLGSSRWRRI 484
               ++  +  FGFD    +YKV++  Y R               +E ++ T+GS  WR +
Sbjct: 143  FPSDVWTVLGFGFDPVRKKYKVLKVSYIRRTNNTAGERYGLSLRSEVQILTVGSPSWRSL 202

Query: 483  EKGVPKTTLQYPYGMYVSNHLHWISCGDDSPLR------IVAFNMAAEDVHEIQPPTLVG 322
             +  P   +  P  +YV+  LHW++     P+R      +++F++  E   E+  P   G
Sbjct: 203  GE-TPYYPIHSPSQVYVNGRLHWVNW----PVRYRPGRKLISFDLEDEKFREVPLP---G 254

Query: 321  QDVTH--NVSLGVIEERLGLFCERNFDNVCYEIWVMKDYGMQGSWAKEYFF--------- 175
             D     +  L VI + L     RN+ +  +E+WVMKDYG++ SW KE+           
Sbjct: 255  SDGIKWGDYMLVVIRDCLSAAVYRNYGS--FEVWVMKDYGLKESWIKEFSIGVYLPKGLE 312

Query: 174  -----SPEVAKCLSDSSAHTVTKLRNGEFLVQYDWGCLGYYDPKQETCRPIVV 31
                 S  V+K    +    +  L+NGE L++Y    L  Y+ +  T + I V
Sbjct: 313  QKIDPSFRVSKFYRRAFTRILCVLKNGEILLEYGRRALVSYEARFGTFKDITV 365