BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006996
         (1227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17281.3| unnamed protein product [Vitis vinifera]              499   e-139
ref|XP_003552811.1| PREDICTED: U3 small nucleolar RNA-associated...   444   e-122
ref|XP_002518041.1| conserved hypothetical protein [Ricinus comm...   443   e-122
ref|XP_003601650.1| Small subunit processome component-like prot...   428   e-117
ref|XP_004139015.1| PREDICTED: small subunit processome componen...   424   e-116

>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
          Length = 2629

 Score =  499 bits (1285), Expect = e-139
 Identities = 250/395 (63%), Positives = 319/395 (80%), Gaps = 3/395 (0%)
 Frame = -3

Query: 1177 MATPSHSQAVKSLNTSSGRKRFVFKNFSQRIEDINIGENVFRSLDPLKAEPSNGSSFLRD 998
            MAT  H+QAVKSLN SSGRKRFVFKNFSQR+E+I I  +VFRSLDPLK EPS GSSF RD
Sbjct: 1    MATSFHAQAVKSLNKSSGRKRFVFKNFSQRLEEIEI--DVFRSLDPLKTEPSEGSSFFRD 58

Query: 997  CLIEWRELNTAEDFISFYEEMMPWVQTLPQVLLHKETIVNKLVSRLQVTARLSLEPILRL 818
            CL++WRELNTAEDFISFYEEMMP VQTLPQVLLHKE I++K+++RL++TARLSLEP+LRL
Sbjct: 59   CLVQWRELNTAEDFISFYEEMMPLVQTLPQVLLHKELIISKVLARLEMTARLSLEPMLRL 118

Query: 817  IAALSRDLLKDFLPFLKRISDAIVNLLDNGADREPEVLEQIFTSWSYIMMYLKKYLIQDI 638
            I ALSRDLL+DF PFL+R+  ++V+LL +GADREPE++EQIFTSWSYIMMYL+KYLI+DI
Sbjct: 119  IGALSRDLLEDFFPFLQRVVGSLVSLLKSGADREPEIIEQIFTSWSYIMMYLQKYLIRDI 178

Query: 637  SELLKITVRLRYYPKDYVEEFMAESVSFLFRNAPDKQLLKGIRDIIQEVVRQPSVSRKSA 458
              +LK+TV+LRYYPKDYV+EFMAE+VSFL RNAP +QL+KG+R I+ E V++P + RKS 
Sbjct: 179  VHVLKVTVKLRYYPKDYVQEFMAEAVSFLLRNAPVEQLIKGVRKIMLEAVKKPLLMRKSG 238

Query: 457  TSALLFHIMKGTSTKFHSRADRVLRLLVNSCIISIGGR--EGSLIVVEVETATFRRLCEE 284
              AL ++ M+GTS++FHSRA++VLRLL++S I+ IG    +GS  V EV    F+RLCEE
Sbjct: 239  VCALFYYAMRGTSSRFHSRAEKVLRLLMDSSIVGIGDEFTQGSDSVAEVIITVFQRLCEE 298

Query: 283  LHSKELKLMWDCLLNEISGSVSDANXXXXXXXXXXXXXSIQFSNGGKISDYQPMLDLVKS 104
            L SKEL L+WDC   +I+  V++               ++Q  NG KISDYQPML+LV+ 
Sbjct: 299  LESKELNLLWDCFYEDITECVTNGCSMHLTRLLFLLVSTLQIDNGLKISDYQPMLELVRL 358

Query: 103  LIQKYIVPGDEATA-DHISEVINEVLQFMLCLLDG 2
            L++ +I+P +   A DH+SE++++VLQ MLC+LDG
Sbjct: 359  LVRTFIIPSNIVVAEDHLSEIVDKVLQLMLCILDG 393


>ref|XP_003552811.1| PREDICTED: U3 small nucleolar RNA-associated protein 20-like [Glycine
            max]
          Length = 2653

 Score =  444 bits (1142), Expect = e-122
 Identities = 219/395 (55%), Positives = 311/395 (78%), Gaps = 3/395 (0%)
 Frame = -3

Query: 1177 MATPSHSQAVKSLNTSSGRKRFVFKNFSQRIEDINIGENVFRSLDPLKAEPSNGSSFLRD 998
            MAT S ++AVKSLN S G +RFVFK+FS R+++I+I  NV+RSLD +KAEPS GSSF RD
Sbjct: 1    MATASQARAVKSLNKSPGGRRFVFKSFSDRVDEIDI--NVYRSLDKVKAEPSEGSSFFRD 58

Query: 997  CLIEWRELNTAEDFISFYEEMMPWVQTLPQVLLHKETIVNKLVSRLQVTARLSLEPILRL 818
            CLIEWRELNTAEDFIS YEE+MP+ QTLP VLLHKE++++KL+SRL + ARLSLEPILRL
Sbjct: 59   CLIEWRELNTAEDFISLYEEIMPYTQTLPLVLLHKESLISKLLSRLHIKARLSLEPILRL 118

Query: 817  IAALSRDLLKDFLPFLKRISDAIVNLLDNGADREPEVLEQIFTSWSYIMMYLKKYLIQDI 638
            IAALSRDLL++F+P L RI D++V+LL++G DREP+++EQIF SWSYIMMYL+KYL+++ 
Sbjct: 119  IAALSRDLLEEFVPLLPRIVDSLVSLLESGGDREPDIIEQIFMSWSYIMMYLQKYLVRNP 178

Query: 637  SELLKITVRLRYYPKDYVEEFMAESVSFLFRNAPDKQLLKGIRDIIQEVVRQPSVSRKSA 458
            SE+LK+T +LRYYPK+YV++FMAE++SF+ RNAPD+QL +GIR +I + V++PS+ R+S 
Sbjct: 179  SEVLKVTSKLRYYPKEYVQQFMAEAMSFVLRNAPDEQLKRGIRRVIDDAVKKPSLCRESG 238

Query: 457  TSALLFHIMKGTSTKFHSRADRVLRLLVNSCIISIGGR--EGSLIVVEVETATFRRLCEE 284
              AL+F+IMKG S++FHS+A+RVL+LL +  I  IG +  + S+I++++  + F++LCE+
Sbjct: 239  VEALVFNIMKGHSSRFHSKAERVLQLLTSEAIYPIGDKADQDSMIILKIVKSVFKKLCEK 298

Query: 283  LHSKELKLMWDCLLNEISGSVSDANXXXXXXXXXXXXXSIQFSNGGKISDYQPMLDLVKS 104
            + SKEL L+W+C+  E++  ++  N             +I+  NG K+SDY+PML+LV  
Sbjct: 299  MESKELDLVWNCIYKEVNECLNTGNSRHLRHILSVLVSAIKVQNGQKVSDYKPMLELVLL 358

Query: 103  LIQKYIVP-GDEATADHISEVINEVLQFMLCLLDG 2
            L+Q +I P G   + + I  V++++L+ ML +L G
Sbjct: 359  LVQTFIKPCGVIDSQEDIYLVVDKILKLMLAILKG 393


>ref|XP_002518041.1| conserved hypothetical protein [Ricinus communis]
            gi|223542637|gb|EEF44174.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2535

 Score =  443 bits (1139), Expect = e-122
 Identities = 224/392 (57%), Positives = 301/392 (76%)
 Frame = -3

Query: 1177 MATPSHSQAVKSLNTSSGRKRFVFKNFSQRIEDINIGENVFRSLDPLKAEPSNGSSFLRD 998
            MAT SH+QAVKSLN S G +RFVFK+ SQRI +I I  +V+RSLD +K++PS GSSF RD
Sbjct: 1    MATASHAQAVKSLNKSPGGRRFVFKSLSQRIVEIEI--DVYRSLDKVKSQPSEGSSFFRD 58

Query: 997  CLIEWRELNTAEDFISFYEEMMPWVQTLPQVLLHKETIVNKLVSRLQVTARLSLEPILRL 818
            CL+EWRELNTAEDFISFYE+MMP VQTLP +LLHKE+I ++L+SRLQ+ ARLSLEPILRL
Sbjct: 59   CLVEWRELNTAEDFISFYEKMMPLVQTLPLILLHKESIFSELLSRLQMKARLSLEPILRL 118

Query: 817  IAALSRDLLKDFLPFLKRISDAIVNLLDNGADREPEVLEQIFTSWSYIMMYLKKYLIQDI 638
            IAALSRDLL+DF+ FL +I D+   LL+NGADREPE++EQIFTSWSYI+MYL+KYL++D+
Sbjct: 119  IAALSRDLLEDFIFFLPKIVDSFSFLLENGADREPEIIEQIFTSWSYILMYLQKYLVKDV 178

Query: 637  SELLKITVRLRYYPKDYVEEFMAESVSFLFRNAPDKQLLKGIRDIIQEVVRQPSVSRKSA 458
              +LK+T +LRYYPK YV+EFMA + SFL R+AP++QL KGIR I+ EVV++P + RK  
Sbjct: 179  VHVLKVTEKLRYYPKVYVQEFMAAATSFLLRSAPNEQLKKGIRKIMFEVVKKPLLVRKPG 238

Query: 457  TSALLFHIMKGTSTKFHSRADRVLRLLVNSCIISIGGREGSLIVVEVETATFRRLCEELH 278
             S LL+H M+GT ++FHSRADRVL+LL  S            +++EV T+ F+R CE++ 
Sbjct: 239  VSGLLYHTMRGTPSRFHSRADRVLQLLTESVD----------VIIEVITSAFQRECEDME 288

Query: 277  SKELKLMWDCLLNEISGSVSDANXXXXXXXXXXXXXSIQFSNGGKISDYQPMLDLVKSLI 98
             KEL ++W+CL  +I  +++D +             ++   +G K+SDYQPM++LV+S++
Sbjct: 289  PKELAMLWNCLYQKIEKALND-DYRHLSCLLSLLISTVSIHDGAKVSDYQPMIELVRSIV 347

Query: 97   QKYIVPGDEATADHISEVINEVLQFMLCLLDG 2
            QK++V      A+  SEVI++VL+ MLC+LDG
Sbjct: 348  QKFVVSSSIVVAEDNSEVIDKVLRLMLCILDG 379


>ref|XP_003601650.1| Small subunit processome component-like protein [Medicago truncatula]
            gi|355490698|gb|AES71901.1| Small subunit processome
            component-like protein [Medicago truncatula]
          Length = 2733

 Score =  428 bits (1101), Expect = e-117
 Identities = 218/408 (53%), Positives = 294/408 (72%), Gaps = 16/408 (3%)
 Frame = -3

Query: 1177 MATPSHSQAVKSLNTSSGRKRFVFKNFSQRIEDINIGENVFRSLDPLKAEPSNGSSFLRD 998
            MATP+H+QAVKSLN S GR+RFVFK+FS R++DI+I  NV+RSL  +KAEPS GSSF RD
Sbjct: 1    MATPAHAQAVKSLNKSPGRRRFVFKSFSDRVDDIDI--NVYRSLHKVKAEPSEGSSFFRD 58

Query: 997  CLIEWRELNTAEDFISFYEEMMPWVQTLPQVLLHKETIVNKLVSRLQVTARLSLEPILRL 818
            CL+EWRELNT EDFIS YEE++P  QTLP VLLHKET+++KL+SRL + ARLSLEPILRL
Sbjct: 59   CLVEWRELNTTEDFISLYEEVIPCTQTLPLVLLHKETLISKLLSRLHMKARLSLEPILRL 118

Query: 817  IAALSRDLLKDFLPFLKRISDAIVNLLDNGADREPEVLEQIFTSWSYIMMYLKKYLIQDI 638
            IAALSRDLL +F+P   RI D++ +LL++GADREP+++EQIFTSWSY+MMYL+KYLI++ 
Sbjct: 119  IAALSRDLLDEFIPLFPRIVDSLASLLESGADREPDIIEQIFTSWSYVMMYLQKYLIRNP 178

Query: 637  SELLKITVRLRYYPKDYVEEFMAESVSFLFRNAPDKQLLKGIRDIIQEVVRQPSVSRKSA 458
            SE+LK+T +LRYYPK+YV +FMAE++SF+ RNAPD QL +GI  +I EV ++PS  R+S 
Sbjct: 179  SEVLKVTSKLRYYPKEYVRQFMAEAMSFVLRNAPDVQLKRGIERVITEVAKKPSPFRESG 238

Query: 457  TSALLFHIMKGTSTKFHSRADRVLRLLVNSCIISIG-----GREG-----------SLIV 326
               LL++IMKG S++FHS+A+RVL+LL +  I  IG     G++G           S  +
Sbjct: 239  VELLLYNIMKGYSSRFHSKAERVLQLLTSKTIYHIGDGDDQGKDGDDQGKDGDDQESSTI 298

Query: 325  VEVETATFRRLCEELHSKELKLMWDCLLNEISGSVSDANXXXXXXXXXXXXXSIQFSNGG 146
            + +  + F++LCE    KEL L+W CL NE+   V+  N             +I+   G 
Sbjct: 299  LNIIKSVFKKLCETTEPKELNLVWSCLYNEVHECVTTENIGHLRRILSVLVSAIKVQKGQ 358

Query: 145  KISDYQPMLDLVKSLIQKYIVPGDEATADHISEVINEVLQFMLCLLDG 2
             +SDY+PML+LV  L++ YI P     +     +++ +L+ ML  LDG
Sbjct: 359  NVSDYKPMLELVLLLVRSYITPLGVTESQEDICLVDRILKLMLATLDG 406


>ref|XP_004139015.1| PREDICTED: small subunit processome component 20 homolog [Cucumis
            sativus]
          Length = 2696

 Score =  424 bits (1090), Expect = e-116
 Identities = 220/411 (53%), Positives = 296/411 (72%), Gaps = 19/411 (4%)
 Frame = -3

Query: 1177 MATPSHSQAVKSLNTSSGRKRFVFKNFSQRIEDINIGENVFRSLDPLKAEPSNGSSFLRD 998
            MAT SH+QAVKSLN S GR+RFVF+ FSQR+++I+I  +V+RSLD +K+EPS GSSF RD
Sbjct: 1    MATASHAQAVKSLNKSPGRRRFVFQTFSQRVQEIDI--DVYRSLDKVKSEPSEGSSFFRD 58

Query: 997  CLIEWRELNTAEDFISFYEEMMPWVQTLPQVLLHKETIVNKLVSRLQVTARLSLEPILRL 818
            CLIEWRELNTAEDFIS YEE++P VQTLP V+LHKE+I + L+SR+Q+ ARLSLEPILRL
Sbjct: 59   CLIEWRELNTAEDFISCYEEIIPLVQTLPLVILHKESIFSNLLSRVQIKARLSLEPILRL 118

Query: 817  IAALSRDLLKDFLPFLKRISDAIVNLLDNGADREPEVLEQIFTSWSYIMMYLKKYLIQDI 638
            IAAL+RDLL+DFLPFL +++DA+V+LL+ GA REPE++E IFTSWSYIMMYL+KYL ++I
Sbjct: 119  IAALARDLLEDFLPFLSQLTDALVSLLEGGAAREPEIIEPIFTSWSYIMMYLQKYLTRNI 178

Query: 637  SELLKITVRLRYYPKDYVEEFMAESVSFLFRNAPDKQLLKGIRDIIQEVVRQPSVSRKSA 458
            ++LL++TV LRYY KDY+++FMAE+ SFL RNAP  QL  GI+ II EVV++P  +R+  
Sbjct: 179  TDLLRVTVSLRYYSKDYIQDFMAEATSFLLRNAPVDQLKNGIKRIILEVVKKPLATREYG 238

Query: 457  TSALLFHIMKGTSTKFHSRADRVLRLLVNSCIISIG-------------------GREGS 335
            TSALLFH M+GTS++FHSRA+ V R L++  I  IG                      GS
Sbjct: 239  TSALLFHTMRGTSSRFHSRAELVFRFLISGPIFEIGRDSSQVTAISIALIVSVRLSIPGS 298

Query: 334  LIVVEVETATFRRLCEELHSKELKLMWDCLLNEISGSVSDANXXXXXXXXXXXXXSIQFS 155
              ++EV     +RLCEE+  +EL+++W CL  EI+ ++S+               + Q  
Sbjct: 299  DAILEVLKCVCQRLCEEMDPQELEVIWKCLFEEITVAISNDYMVHINHLLMLLASAAQNV 358

Query: 154  NGGKISDYQPMLDLVKSLIQKYIVPGDEATADHISEVINEVLQFMLCLLDG 2
            N  K+ DY+PML+LV  L+ K+         D +S +++ +LQ ML +L+G
Sbjct: 359  NWKKLHDYKPMLELVDLLVMKFATTPSLTVDDDLSSLVDTILQLMLVILEG 409