BLASTX nr result

ID: Coptis21_contig00006993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006993
         (914 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267372.1| PREDICTED: uncharacterized protein At4g13200...   127   5e-27
ref|XP_002521111.1| conserved hypothetical protein [Ricinus comm...   122   9e-26
ref|XP_002301776.1| predicted protein [Populus trichocarpa] gi|1...   122   9e-26
ref|XP_003520920.1| PREDICTED: uncharacterized protein LOC100800...   109   8e-22
ref|XP_003552081.1| PREDICTED: uncharacterized protein At4g13200...   106   7e-21

>ref|XP_002267372.1| PREDICTED: uncharacterized protein At4g13200, chloroplastic [Vitis
           vinifera] gi|297744310|emb|CBI37280.3| unnamed protein
           product [Vitis vinifera]
          Length = 195

 Score =  127 bits (318), Expect = 5e-27
 Identities = 78/149 (52%), Positives = 98/149 (65%), Gaps = 2/149 (1%)
 Frame = -3

Query: 723 VKCSSSSRPP--GSGETDSKDVLDAFFLGKALAEVINERIESTIGELLSAVGMLQAEQQR 550
           V+C+SS+ PP  GSG++DS+ +LDAFFLGKALAE +NERIEST+GE LS VG LQAEQQ+
Sbjct: 55  VQCNSSTNPPPPGSGDSDSRSILDAFFLGKALAEALNERIESTVGEFLSVVGRLQAEQQK 114

Query: 549 QVQDFQEYVLXXXXXXXXXXXXXAMEAQGLAPKSTTVSTAYDVVPPAVSNSPAKNETPDV 370
           QVQDFQ+ VL             A+EAQGL PKSTT +T  D V    S + A  ETP  
Sbjct: 115 QVQDFQDEVLERAKRAKEKAAREALEAQGLIPKSTTAAT--DSVTSTASTTSA--ETPAN 170

Query: 369 SASSSDPDITTTSNYSIDKDP*LGMFDDE 283
           S   S+P+     N    +DP LG+ ++E
Sbjct: 171 SPLLSNPNSPRPPN----EDPVLGVPNEE 195


>ref|XP_002521111.1| conserved hypothetical protein [Ricinus communis]
           gi|223539680|gb|EEF41262.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 215

 Score =  122 bits (307), Expect = 9e-26
 Identities = 77/168 (45%), Positives = 99/168 (58%), Gaps = 10/168 (5%)
 Frame = -3

Query: 780 STLKLKSPSSF-----TGVFPKLSVKCSSSSRP--PGSGETDSKDVLDAFFLGKALAEVI 622
           S LKLK   +F     T     ++++C+S++ P  PGSG+ +S+ VLDAFFLGKALAE +
Sbjct: 37  SDLKLKKNLAFGFRNETTQSHTINLRCNSTTGPGGPGSGDNESRSVLDAFFLGKALAEAV 96

Query: 621 NERIESTIGELLSAVGMLQAEQQRQVQDFQEYVLXXXXXXXXXXXXXAMEAQGLAPKSTT 442
           NER+ES +GE LS +G LQAEQQRQ+QDFQE VL             AMEAQGL  K +T
Sbjct: 97  NERVESAVGEFLSTIGRLQAEQQRQIQDFQEDVLERARKAKENAAWEAMEAQGLVSKPST 156

Query: 441 V---STAYDVVPPAVSNSPAKNETPDVSASSSDPDITTTSNYSIDKDP 307
           V   ST Y +     S++     TP  + SSS P+ T  S      DP
Sbjct: 157 VDAASTTYGINSATSSSTTTNAVTP--TNSSSSPNSTAVSTAQTGSDP 202


>ref|XP_002301776.1| predicted protein [Populus trichocarpa] gi|118484006|gb|ABK93890.1|
           unknown [Populus trichocarpa]
           gi|222843502|gb|EEE81049.1| predicted protein [Populus
           trichocarpa]
          Length = 209

 Score =  122 bits (307), Expect = 9e-26
 Identities = 83/192 (43%), Positives = 112/192 (58%), Gaps = 10/192 (5%)
 Frame = -3

Query: 828 SIVVPCLCSQKTPLYSSTLKLKS------PSSFTGVFPKLSVKCSSSSRPPG----SGET 679
           S V P L S+ +   SS +KLK+       ++  G   K++V+CSSSS P G    SG++
Sbjct: 31  SFVNPPLISRSSSSSSSHIKLKTHLGLRFETALRGCH-KINVRCSSSSGPGGPGSASGDS 89

Query: 678 DSKDVLDAFFLGKALAEVINERIESTIGELLSAVGMLQAEQQRQVQDFQEYVLXXXXXXX 499
           DS+ VLDAFFLGKA+AE +NER+ES +GE LS +G LQAEQQ+Q+QDFQE VL       
Sbjct: 90  DSRSVLDAFFLGKAVAEALNERVESAVGEFLSTIGRLQAEQQKQIQDFQEDVLGRAKKAK 149

Query: 498 XXXXXXAMEAQGLAPKSTTVSTAYDVVPPAVSNSPAKNETPDVSASSSDPDITTTSNYSI 319
                 AME QG+ PK TTV T         S +   ++TP  S +++   + T SN   
Sbjct: 150 EQAAREAMEGQGIIPKPTTVET--------TSVNQGVSQTPSPSTANA---VKTDSN-PA 197

Query: 318 DKDP*LGMFDDE 283
            K P LG+  D+
Sbjct: 198 TKGPVLGVSSDD 209


>ref|XP_003520920.1| PREDICTED: uncharacterized protein LOC100800588 [Glycine max]
          Length = 196

 Score =  109 bits (273), Expect = 8e-22
 Identities = 80/181 (44%), Positives = 97/181 (53%), Gaps = 12/181 (6%)
 Frame = -3

Query: 852 MKTNLLPSSIVVPCLCSQKT---PLYSSTLKLKSPSSFTGVFPK-----LSVKCSSSSRP 697
           M T L PSS   P L        PL+SS     S SS   +  K       ++C+ S  P
Sbjct: 1   MNTVLSPSS-AFPTLSKTYVSFGPLFSSFAVPSSSSSHIELPRKRGSQNTGLRCNCSIWP 59

Query: 696 --PGSGETDS--KDVLDAFFLGKALAEVINERIESTIGELLSAVGMLQAEQQRQVQDFQE 529
             PGSG++DS  + +LDAFFLGKA+AE +NERIEST+GE+LS VG LQAEQQ+QVQDFQE
Sbjct: 60  GGPGSGDSDSSNRSILDAFFLGKAVAEALNERIESTVGEILSTVGRLQAEQQKQVQDFQE 119

Query: 528 YVLXXXXXXXXXXXXXAMEAQGLAPKSTTVSTAYDVVPPAVSNSPAKNETPDVSASSSDP 349
            VL             AMEAQG   KS   +   D      SNS     T   S  +S+ 
Sbjct: 120 EVLERAKKSKENAAREAMEAQGFISKSAVETKVTDSTTSKTSNSATGPVTSVQSTDASET 179

Query: 348 D 346
           D
Sbjct: 180 D 180


>ref|XP_003552081.1| PREDICTED: uncharacterized protein At4g13200, chloroplastic-like
           [Glycine max]
          Length = 193

 Score =  106 bits (265), Expect = 7e-21
 Identities = 70/146 (47%), Positives = 83/146 (56%), Gaps = 12/146 (8%)
 Frame = -3

Query: 729 LSVKCSSSSRPPGSGETDS--KDVLDAFFLGKALAEVINERIESTIGELLSAVGMLQAEQ 556
           L  KCS     PGSG++DS  + VLDAFFLGKA+AE +NERIEST+GE+LS VG LQAEQ
Sbjct: 47  LRCKCSIWPGGPGSGDSDSSNRSVLDAFFLGKAVAEALNERIESTVGEILSTVGRLQAEQ 106

Query: 555 QRQVQDFQEYVLXXXXXXXXXXXXXAMEAQGLAPK---------STTVSTAYDVVPPAVS 403
           Q+QVQDFQE VL             AMEAQGL  K         S T  T      P  S
Sbjct: 107 QKQVQDFQEEVLERAKKSKEKSARQAMEAQGLISKSGVETKVLYSITSDTLNSSTNPVTS 166

Query: 402 -NSPAKNETPDVSASSSDPDITTTSN 328
             S   +ET    A   +P  ++TS+
Sbjct: 167 VQSTVASETISELAKGEEPTTSSTSD 192


Top