BLASTX nr result

ID: Coptis21_contig00006970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006970
         (1055 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284108.1| PREDICTED: dof zinc finger protein DOF3.4 [V...   144   3e-32
ref|XP_003518090.1| PREDICTED: dof zinc finger protein DOF3.4 [G...   139   1e-30
ref|XP_002510287.1| zinc finger protein, putative [Ricinus commu...   132   1e-28
ref|XP_004146609.1| PREDICTED: uncharacterized protein LOC101211...   122   1e-25
ref|XP_004146854.1| PREDICTED: dof zinc finger protein DOF1.7-li...   121   3e-25

>ref|XP_002284108.1| PREDICTED: dof zinc finger protein DOF3.4 [Vitis vinifera]
          Length = 226

 Score =  144 bits (364), Expect = 3e-32
 Identities = 94/231 (40%), Positives = 114/231 (49%), Gaps = 17/231 (7%)
 Frame = +1

Query: 139 RQPAQPCQENNQQP----LTCPRCESTNTKFCYYNNYNLSQPRHYCKSCRRYWTQGGTLR 306
           R+ A+P Q     P    L CPRC+STNTKFCYYNNYNLSQPRH+CKSCRRYWTQGGTLR
Sbjct: 8   RRVARPQQVGGHPPQSEHLPCPRCDSTNTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLR 67

Query: 307 NIPVGGGTRKNNPKXXXXXXXXXXXXXXXXXXXXXXXVSSTRPVPV-PISSASLSDFDLX 483
           NIPVGGGTRKN+ +                        S+    P  PIS + +   +  
Sbjct: 68  NIPVGGGTRKNSKRSRTATSSSS---------------STLETTPANPISVSPVLKAETE 112

Query: 484 XXXXXXXXXXXXXXXXFYNPLNS---GFLALNGF----GSGYDNMGGFEIGKAVWPLGEV 642
                           F + LNS   GFLALNGF    G G+D M GF   K VW   +V
Sbjct: 113 TPQRNGLSLNGDVSGGFTSLLNSQGPGFLALNGFSLGLGPGFDEM-GFGPAKGVWSYPDV 171

Query: 643 SET-----XXXXXXXXXXXXXXNTWQFGIGSDGGFGETECLTNWTELAMAT 780
            +                    NTWQ   G + GF + +C   W +LA++T
Sbjct: 172 GDVVLGGDGTGSGGGSASSSICNTWQLS-GGEVGFVDGDCFA-WPDLAIST 220


>ref|XP_003518090.1| PREDICTED: dof zinc finger protein DOF3.4 [Glycine max]
          Length = 234

 Score =  139 bits (350), Expect = 1e-30
 Identities = 88/215 (40%), Positives = 106/215 (49%), Gaps = 3/215 (1%)
 Frame = +1

Query: 145 PAQPCQENNQQPLTCPRCESTNTKFCYYNNYNLSQPRHYCKSCRRYWTQGGTLRNIPVGG 324
           P  P QEN    L CPRC+STNTKFCYYNNYN SQPRH+CKSCRRYWT GGTLR+IPVGG
Sbjct: 23  PPPPEQEN----LPCPRCDSTNTKFCYYNNYNYSQPRHFCKSCRRYWTHGGTLRDIPVGG 78

Query: 325 GTRKNNPKXXXXXXXXXXXXXXXXXXXXXXXVSS-TRPVPVPISSASLSDFDLXXXXXXX 501
           G+RKN  +                         + T   PV  +   + D D+       
Sbjct: 79  GSRKNAKRSRTHHVAATSSSSTSSTMTSAQEHHAHTLLAPVASTHYGVLDGDVKQTSNGN 138

Query: 502 XXXXXXXXXXFYNPLNSGFLALNGF--GSGYDNMGGFEIGKAVWPLGEVSETXXXXXXXX 675
                       N   SGFLAL GF  G GYD+M GF IG++ W    + +         
Sbjct: 139 GNVCGSFTSLLNNTHGSGFLALGGFGLGHGYDDM-GFGIGRSGWAFPGMVD--GGNIGGA 195

Query: 676 XXXXXXNTWQFGIGSDGGFGETECLTNWTELAMAT 780
                 NTWQ   G +GGF   +C   W  LA++T
Sbjct: 196 VASSGLNTWQLESG-EGGFVSGDCFA-WPGLAIST 228


>ref|XP_002510287.1| zinc finger protein, putative [Ricinus communis]
           gi|223550988|gb|EEF52474.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 368

 Score =  132 bits (332), Expect = 1e-28
 Identities = 90/272 (33%), Positives = 123/272 (45%), Gaps = 18/272 (6%)
 Frame = +1

Query: 28  HSLPLKTPPHFPLHFSSFTPLKMRTELELQSDSI--CQHRQPAQPCQENNQQPLTCPRCE 201
           +SLPL     F L F     ++M TE     ++     H  P     E    PL CPRC+
Sbjct: 100 YSLPLFASSKFLLFFEKTPKIEMPTESTPGQNNTNPVSHSHPPPKLAE----PLPCPRCD 155

Query: 202 STNTKFCYYNNYNLSQPRHYCKSCRRYWTQGGTLRNIPVGGGTRKNNPKXXXXXXXXXXX 381
           S NTKFCYYNNYNLSQPRH+CK+CRRYWT GGTLRN+P+GGGTRKN+ +           
Sbjct: 156 SNNTKFCYYNNYNLSQPRHFCKACRRYWTHGGTLRNVPIGGGTRKNSKRSRSYSSSITTS 215

Query: 382 XXXXXXXXXXXXVSSTRP------VPVPIS-----SASLSD-FDLXXXXXXXXXXXXXXX 525
                        +  +P      + +P S     S +LSD ++L               
Sbjct: 216 TTTTSASALSSLNTPDQPDQSLPVLAIPESVLTAKSENLSDNWNLNDEKVNLVSQNGNFI 275

Query: 526 XXFYNPLNSGFLALNGFGSGYDNMGGFEIGKAVWPLGEVSETXXXXXXXXXXXXXXNTW- 702
               +    GF+ + G+G G+   G  + G+  W    ++                NTW 
Sbjct: 276 SLLSSQQGQGFMGMVGYGPGF-GYGFCDTGRENWVYPGMAYVNGGDAVEDGTSSGCNTWQ 334

Query: 703 QFGIGSDGG---FGETECLTNWTELAMATASR 789
           Q  +G  GG    GE  CL +W  LA++T  +
Sbjct: 335 QVEVGDAGGGLVDGENNCL-SWPGLAISTPGK 365


>ref|XP_004146609.1| PREDICTED: uncharacterized protein LOC101211189 [Cucumis sativus]
           gi|449508912|ref|XP_004163442.1| PREDICTED:
           uncharacterized LOC101211189 [Cucumis sativus]
          Length = 351

 Score =  122 bits (306), Expect = 1e-25
 Identities = 50/73 (68%), Positives = 62/73 (84%)
 Frame = +1

Query: 121 DSICQHRQPAQPCQENNQQPLTCPRCESTNTKFCYYNNYNLSQPRHYCKSCRRYWTQGGT 300
           D+  Q  Q  Q  Q++ Q+PL CPRC+S+NTKFCYYNNY+LSQPRH+CK+C+RYWT+GGT
Sbjct: 51  DNNKQQDQKTQQKQQHQQEPLRCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGT 110

Query: 301 LRNIPVGGGTRKN 339
           LRN+PVGGG RKN
Sbjct: 111 LRNVPVGGGCRKN 123


>ref|XP_004146854.1| PREDICTED: dof zinc finger protein DOF1.7-like [Cucumis sativus]
           gi|449476907|ref|XP_004154872.1| PREDICTED: dof zinc
           finger protein DOF1.7-like [Cucumis sativus]
          Length = 202

 Score =  121 bits (304), Expect = 3e-25
 Identities = 52/69 (75%), Positives = 60/69 (86%)
 Frame = +1

Query: 142 QPAQPCQENNQQPLTCPRCESTNTKFCYYNNYNLSQPRHYCKSCRRYWTQGGTLRNIPVG 321
           QP +P Q   Q+ L CPRC+STNTKFCYYNNYNLSQPRH+CK+CRRYWT+GG LRNIPVG
Sbjct: 8   QPIKP-QFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVG 66

Query: 322 GGTRKNNPK 348
           GGTRKN+ +
Sbjct: 67  GGTRKNSKR 75


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