BLASTX nr result

ID: Coptis21_contig00006952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006952
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526500.1| ATP binding protein, putative [Ricinus commu...   180   3e-43
ref|XP_002326878.1| predicted protein [Populus trichocarpa] gi|1...   176   4e-42
ref|XP_002267346.1| PREDICTED: 20 kDa chaperonin, chloroplastic ...   170   3e-40
gb|AFK37353.1| unknown [Lotus japonicus] gi|388502802|gb|AFK3946...   167   2e-39
ref|XP_002878323.1| hypothetical protein ARALYDRAFT_486490 [Arab...   166   5e-39

>ref|XP_002526500.1| ATP binding protein, putative [Ricinus communis]
           gi|223534175|gb|EEF35891.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 137

 Score =  180 bits (456), Expect = 3e-43
 Identities = 87/111 (78%), Positives = 100/111 (90%)
 Frame = -3

Query: 645 TKPNFGSFSSVGMRKNNSLRVNAVATKWEPTKVVPQADRVLIRLEEVPQKSAGGVLLPKS 466
           T P+      VG R+N SLR+NA+A KW+PTKVVPQADRVLIRL+E+P+KS+GGVLLPKS
Sbjct: 20  TSPSLSQQRIVGFRRN-SLRINAIAKKWDPTKVVPQADRVLIRLDELPEKSSGGVLLPKS 78

Query: 465 AVKFERYLMGEILSVGSEVGEIETGKKVLFSDINAYEVDLGTDARHCFCRA 313
           AVKFERYLMGEILSVG+EVGE+E GKKVLFSDINAYEVDLGTDA+HCFC+A
Sbjct: 79  AVKFERYLMGEILSVGTEVGEVEAGKKVLFSDINAYEVDLGTDAKHCFCKA 129


>ref|XP_002326878.1| predicted protein [Populus trichocarpa] gi|118481330|gb|ABK92608.1|
           unknown [Populus trichocarpa]
           gi|222835193|gb|EEE73628.1| predicted protein [Populus
           trichocarpa]
          Length = 138

 Score =  176 bits (447), Expect = 4e-42
 Identities = 81/97 (83%), Positives = 94/97 (96%)
 Frame = -3

Query: 603 KNNSLRVNAVATKWEPTKVVPQADRVLIRLEEVPQKSAGGVLLPKSAVKFERYLMGEILS 424
           K NSLR+NA++ KWEPTKVVPQADRVLIRLE++P+KS+GGVLLPKSAVKFERYLMGE+LS
Sbjct: 34  KRNSLRINAISKKWEPTKVVPQADRVLIRLEDLPEKSSGGVLLPKSAVKFERYLMGEVLS 93

Query: 423 VGSEVGEIETGKKVLFSDINAYEVDLGTDARHCFCRA 313
           VG+EVGE+E GKKVLFSDINAYE+DLGTDA+HCFC+A
Sbjct: 94  VGAEVGEVEAGKKVLFSDINAYEIDLGTDAKHCFCKA 130


>ref|XP_002267346.1| PREDICTED: 20 kDa chaperonin, chloroplastic [Vitis vinifera]
           gi|297734669|emb|CBI16720.3| unnamed protein product
           [Vitis vinifera]
          Length = 134

 Score =  170 bits (430), Expect = 3e-40
 Identities = 77/98 (78%), Positives = 94/98 (95%)
 Frame = -3

Query: 603 KNNSLRVNAVATKWEPTKVVPQADRVLIRLEEVPQKSAGGVLLPKSAVKFERYLMGEILS 424
           ++++L++NA+A KWEPTKVVPQADRVLIRL+++P+KS+GGVLLPKSAVKFERYLMGEILS
Sbjct: 30  RSSALKINAIAKKWEPTKVVPQADRVLIRLQDLPEKSSGGVLLPKSAVKFERYLMGEILS 89

Query: 423 VGSEVGEIETGKKVLFSDINAYEVDLGTDARHCFCRAS 310
           +G++VGE+E GKKVLFSDINAYEVDLGTD RHCFC+ S
Sbjct: 90  IGADVGEVEAGKKVLFSDINAYEVDLGTDGRHCFCKES 127


>gb|AFK37353.1| unknown [Lotus japonicus] gi|388502802|gb|AFK39467.1| unknown
           [Lotus japonicus]
          Length = 138

 Score =  167 bits (423), Expect = 2e-39
 Identities = 77/98 (78%), Positives = 91/98 (92%)
 Frame = -3

Query: 603 KNNSLRVNAVATKWEPTKVVPQADRVLIRLEEVPQKSAGGVLLPKSAVKFERYLMGEILS 424
           K NSL+VNAVATKWEP KVVPQADRVLIRLEE+ QK+ GG+LLPKSAVKFERYL+GE+L+
Sbjct: 34  KRNSLKVNAVATKWEPAKVVPQADRVLIRLEELAQKTTGGILLPKSAVKFERYLVGEVLT 93

Query: 423 VGSEVGEIETGKKVLFSDINAYEVDLGTDARHCFCRAS 310
           VG+E GE++ G KVLF+D+NAYEVDLGTDA+HCFC+AS
Sbjct: 94  VGAEAGEVKAGAKVLFTDVNAYEVDLGTDAKHCFCKAS 131


>ref|XP_002878323.1| hypothetical protein ARALYDRAFT_486490 [Arabidopsis lyrata subsp.
           lyrata] gi|297324161|gb|EFH54582.1| hypothetical protein
           ARALYDRAFT_486490 [Arabidopsis lyrata subsp. lyrata]
          Length = 137

 Score =  166 bits (420), Expect = 5e-39
 Identities = 78/102 (76%), Positives = 95/102 (93%)
 Frame = -3

Query: 615 VGMRKNNSLRVNAVATKWEPTKVVPQADRVLIRLEEVPQKSAGGVLLPKSAVKFERYLMG 436
           +G+R+N SLR+NAV+TKWEP KVVPQADRVL+RLE +P+KS+GGVLLPKSAVKFERYL G
Sbjct: 30  LGIRRN-SLRINAVSTKWEPAKVVPQADRVLVRLEVLPEKSSGGVLLPKSAVKFERYLTG 88

Query: 435 EILSVGSEVGEIETGKKVLFSDINAYEVDLGTDARHCFCRAS 310
           E++SVGSEVGE+E GKKV+FSD++AYEVD GTDA+HCFC+ S
Sbjct: 89  EVVSVGSEVGEVEPGKKVVFSDMSAYEVDFGTDAKHCFCKES 130


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