BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006938
         (1406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521010.1| DNA binding protein, putative [Ricinus commu...   415   e-113
ref|XP_002282584.2| PREDICTED: transcription factor bHLH3-like [...   411   e-112
ref|XP_004151980.1| PREDICTED: transcription factor bHLH3-like [...   399   e-108
gb|ADL36590.1| BHLH domain class transcription factor [Malus x d...   395   e-107
ref|XP_003536928.1| PREDICTED: transcription factor bHLH3-like [...   393   e-107

>ref|XP_002521010.1| DNA binding protein, putative [Ricinus communis]
            gi|223539847|gb|EEF41427.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 503

 Score =  415 bits (1066), Expect = e-113
 Identities = 232/409 (56%), Positives = 284/409 (69%), Gaps = 9/409 (2%)
 Frame = +3

Query: 6    NKKRVLQQLHGLFGGATPPRF----DSVSDVQIFYLTSVYYSFPFDDAPSGPAWSFASNR 173
            +KKRVLQ+LH  F  +    +    + VSDV++FYLTS+Y++F  D A  GPA S+ S R
Sbjct: 112  SKKRVLQKLHSCFNASDGDNYAANLNGVSDVEMFYLTSMYFTFRCDSA-YGPAESYKSGR 170

Query: 174  PIWASDQKNCLDHYSSRSFLARSAGFKTLVCVPIQSGVVELGSLKQCPEDHNVLQMIQNV 353
             IWASD   CL+HY  RSFLARSAGF+TL   P++SGVVELGS+K  PE+H + +  + +
Sbjct: 171  SIWASDVITCLEHYHLRSFLARSAGFQTLAFFPVKSGVVELGSIKSIPEEHIIGERAKTI 230

Query: 354  FSGSRSTTSLV-PKIFGHDLSLGNAKPRPLTINFSPKVEEEDMGFSS----ASYTNQASI 518
            F G+ +  +   PKIFG +LSLG++K R ++INFSPKVE+ D+ F+S    A  TN  + 
Sbjct: 231  FGGANALQAKTCPKIFGRELSLGSSKSRSISINFSPKVED-DLIFTSEYPEAIGTNPVNG 289

Query: 519  SGHSNGLADQEYATYPNECPIEENNEDKFFLQRNHNLPGGLNPQVKILSSDQSLKDESSR 698
            S  S              CP  + NE K F   N     G N +  +   +Q  +D S  
Sbjct: 290  STSSG-------------CP-SDINEAKLFPHLNQMNVPGFNTETMVTGLEQPKEDLSPH 335

Query: 699  PDERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDA 878
             +ERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDA
Sbjct: 336  QNERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDA 395

Query: 879  ITYITDLQMKIRVLETEKEMTRNNNQKQPLVPDIDVQTRQEDTVVRVSCPLDAHPVSRVI 1058
            ITYITDLQ KIRVLETEKEM+ NNNQ Q  V +ID Q RQED VVRVSCPLD HPVS ++
Sbjct: 396  ITYITDLQTKIRVLETEKEMS-NNNQNQFPVTEIDFQARQEDAVVRVSCPLDVHPVSSIL 454

Query: 1059 RAFQETQVAVHESEVSTTDNDSVLHTFSIRTQGGASEHLKERLIAALSR 1205
             +F+E QV   E  +S  +ND ++HTFSIRTQGGA+E LKE+L A  S+
Sbjct: 455  ESFREHQVTAQECNMSAAENDKIIHTFSIRTQGGAAEQLKEKLEAVFSK 503


>ref|XP_002282584.2| PREDICTED: transcription factor bHLH3-like [Vitis vinifera]
          Length = 491

 Score =  411 bits (1056), Expect = e-112
 Identities = 235/405 (58%), Positives = 281/405 (69%), Gaps = 6/405 (1%)
 Frame = +3

Query: 9    KKRVLQQLHGLFGGATPPRF----DSVSDVQIFYLTSVYYSFPFDDAPSGPAWSFASNRP 176
            KK VL++LH  FG     ++    D +S++++FYLTS++YSF   D   GPA    S R 
Sbjct: 102  KKEVLKKLHEYFGVGEEDKYWAKLDLLSNIEMFYLTSMFYSFS-GDLQYGPALVLKSGRW 160

Query: 177  IWASDQKNCLDHYSSRSFLARSAGFKTLVCVPIQSGVVELGSLKQCPEDHNVLQMIQNVF 356
            +W  D   C D Y +RS LAR AGF+T+V VP++ GV+E+ SL    ED NV++MI+ VF
Sbjct: 161  VWVVDAVGCSDQYRARSVLARLAGFQTVVFVPVKDGVIEVASLMLVKEDENVVKMIKGVF 220

Query: 357  SGSR-STTSLVPKIFGHDLSLGN-AKPRPLTINFSPKVEEEDMGFSSASYTNQASISGHS 530
             G       + PKIFGH+LSLG+ AK R ++INF+PK+E  D GF + SY  Q   S   
Sbjct: 221  GGMNFGQAKVYPKIFGHELSLGSGAKSRSMSINFAPKLEG-DSGFGAESYDVQGLGS--- 276

Query: 531  NGLADQEYATYPNECPIEENNEDKFFLQRNHNLPGGLNPQVKILSSDQSLKDESSRPDER 710
                +Q Y    N C + E+NE K F Q N       N QV +   +Q   D   R DER
Sbjct: 277  ----NQVYGNSSNGC-MNEDNEGKIFPQLNQIF----NAQVLVSGFEQPKDDLLPRVDER 327

Query: 711  KPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYI 890
            KPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAI+YI
Sbjct: 328  KPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAISYI 387

Query: 891  TDLQMKIRVLETEKEMTRNNNQKQPLVPDIDVQTRQEDTVVRVSCPLDAHPVSRVIRAFQ 1070
            TDLQMKIR+LE EKE+  NN Q Q  VP ID Q RQEDTVVRVSCPLDAHPVSRVI+  +
Sbjct: 388  TDLQMKIRILEAEKEIV-NNKQNQSPVPQIDFQDRQEDTVVRVSCPLDAHPVSRVIKTLK 446

Query: 1071 ETQVAVHESEVSTTDNDSVLHTFSIRTQGGASEHLKERLIAALSR 1205
            E QV   E+EVST +ND VLHTFSIRTQ GA+E LKE+L+AALS+
Sbjct: 447  EHQVVAPEAEVSTMENDKVLHTFSIRTQTGAAECLKEKLVAALSK 491


>ref|XP_004151980.1| PREDICTED: transcription factor bHLH3-like [Cucumis sativus]
            gi|449505155|ref|XP_004162392.1| PREDICTED: transcription
            factor bHLH3-like [Cucumis sativus]
          Length = 501

 Score =  399 bits (1024), Expect = e-108
 Identities = 221/405 (54%), Positives = 275/405 (67%), Gaps = 6/405 (1%)
 Frame = +3

Query: 9    KKRVLQQLHGLFGGATPP----RFDSVSDVQIFYLTSVYYSFPFDDAPSGPAWSFASNRP 176
            K +VLQ L   FG +       R D  SD+++ YLTS YY F  D   S    S+ S + 
Sbjct: 111  KTQVLQMLQSSFGRSDEDGYGARRDEASDIEMLYLTSKYYKFMCDSG-SSLGESYKSGKS 169

Query: 177  IWASDQKNCLDHYSSRSFLARSAGFKTLVCVPIQSGVVELGSLKQCPEDHNVLQMIQNVF 356
            IWASD  +CL +Y SR FLA+ AGF+TLV VP++ GVVELGS K  PED  VL++++  F
Sbjct: 170  IWASDVTSCLRNYQSRGFLAKVAGFQTLVFVPVKLGVVELGSTKSIPEDQGVLELVRASF 229

Query: 357  SGS-RSTTSLVPKIFGHDLSLGNAKPRPLTINFSPKVEEEDMGFSSASYTNQASISGHSN 533
             GS  +     P+IFGH+LSLG  KPR L+INFSPK+E+ D  FSS  Y  Q     H  
Sbjct: 230  GGSITAQLKAFPRIFGHELSLGGTKPRSLSINFSPKLED-DTNFSSEGYELQGLGGNHIF 288

Query: 534  GLADQEYATYPNECPIEENNEDKFFLQRNHNLPGGLNPQVKILSSDQSLKDESSRPDERK 713
            G +        N C   ++N+ K F   N  + GG N Q ++ + +    + S + D+RK
Sbjct: 289  GNSS-------NGCR-GDDNDAKMFPHGNQEVVGGFNAQTRLSTMEFPRDESSPQGDDRK 340

Query: 714  PRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYIT 893
            PRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYIT
Sbjct: 341  PRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYIT 400

Query: 894  DLQMKIRVLETEKEMTRNNNQKQPLVPDIDVQTRQEDTVVRVSCPLDAHPVSRVIRAFQE 1073
            DLQMKI+V+ETEK++     +      +ID   R+ED VVRVSCPLD HPVS+VI+ F+E
Sbjct: 401  DLQMKIKVMETEKQIASGREKN----TEIDFHAREEDAVVRVSCPLDLHPVSKVIKTFRE 456

Query: 1074 TQVAVHESEVST-TDNDSVLHTFSIRTQGGASEHLKERLIAALSR 1205
             Q+   ES V+T TDND V+H+F IRT+GGA+E LKE+L+AALS+
Sbjct: 457  HQIEAQESNVTTSTDNDKVIHSFFIRTEGGAAEQLKEKLVAALSK 501


>gb|ADL36590.1| BHLH domain class transcription factor [Malus x domestica]
          Length = 502

 Score =  395 bits (1016), Expect = e-107
 Identities = 225/406 (55%), Positives = 280/406 (68%), Gaps = 7/406 (1%)
 Frame = +3

Query: 9    KKRVLQQLHGLFGGATPP----RFDSVSDVQIFYLTSVYYSFPFDD-APSGPAWSFASNR 173
            KK V+++LH  FGG        R D VSDV++FYLTS+ Y+F  D  +  GPA S+ S +
Sbjct: 115  KKLVVEKLHACFGGLNADNYARRLDGVSDVEMFYLTSMCYAFQLDSISHCGPAESYNSRK 174

Query: 174  PIWASDQKNCLDHYSSRSFLARSAGFKTLVCVPIQSGVVELGSLKQCPEDHNVLQMIQNV 353
             IW SD  +CL HY SRSFLAR AGF+T+V VP++SGVVELGS+K   E+ + + M+++ 
Sbjct: 175  SIWVSDAGSCLHHYQSRSFLARLAGFQTVVFVPMKSGVVELGSVKSTLEEQSYVDMVRSA 234

Query: 354  F-SGSRSTTSLVPKIFGHDLSLGNAKPRPLTINFSPKVEEEDMGFSSASYTNQASISGHS 530
            F   S       P IFG +LSLG  K + + ++F+PK+EE D  F S S+  Q+   G S
Sbjct: 235  FWESSPIQPKAFPMIFGRELSLGGPKSQSVNVSFTPKIEE-DFVFPSESFELQSV--GTS 291

Query: 531  NGLADQEYATYPNECPIEENNEDKFFLQRNHNLPGGLNPQVKILSSDQSLKDESS-RPDE 707
            NG                E  E K F Q N  +  G N Q ++ SS + LKDESS + DE
Sbjct: 292  NGFRS-------------EGGEVKLFPQMNQMMVDGFNTQTRV-SSSELLKDESSTQVDE 337

Query: 708  RKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITY 887
            +KPRKRGRKP+NGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIT+
Sbjct: 338  QKPRKRGRKPSNGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITH 397

Query: 888  ITDLQMKIRVLETEKEMTRNNNQKQPLVPDIDVQTRQEDTVVRVSCPLDAHPVSRVIRAF 1067
            ITDLQ KIRV+ETEK+M  NN  KQ  VP+ID Q R  D VVR++ PLD+HPVS VIR  
Sbjct: 398  ITDLQTKIRVIETEKQMV-NNKGKQLPVPEIDFQERHGDAVVRMNFPLDSHPVSDVIRTL 456

Query: 1068 QETQVAVHESEVSTTDNDSVLHTFSIRTQGGASEHLKERLIAALSR 1205
            +E ++   ES VS TDND V+HTFSI+TQGG +E L+E+L+A LS+
Sbjct: 457  REHKIVPQESNVSITDNDKVIHTFSIQTQGGDAEKLREKLVAFLSK 502


>ref|XP_003536928.1| PREDICTED: transcription factor bHLH3-like [Glycine max]
          Length = 504

 Score =  393 bits (1009), Expect = e-107
 Identities = 222/408 (54%), Positives = 277/408 (67%), Gaps = 9/408 (2%)
 Frame = +3

Query: 9    KKRVLQQLHGLFGG-----ATPPRFDSVSDVQIFYLTSVYYSFPFDDAPSGPAWSFASNR 173
            +K+VLQ+L   FGG     A   R D VS++ +FYL+S+ Y F FD    GP  SF S +
Sbjct: 108  RKKVLQKLDACFGGSLLKDANHVRLDRVSELLMFYLSSMCYIFGFDSL-CGPGSSFKSGK 166

Query: 174  PIWASDQKNCLDHYSSRSFLARSAGFKTLVCVPIQSGVVELGSLKQCPEDHNVLQMIQNV 353
             IWASD   CL+   SRSFL + AG  T+V VP++SGVVELGS +  PE+  V++M++  
Sbjct: 167  FIWASDAAGCLNQLESRSFLGKLAGLHTVVFVPLKSGVVELGSFEMVPEEQGVVEMVRTA 226

Query: 354  FS-GSRSTTSLVPKIFGHDLSLGNAKPRPLTINFSPKVEEEDMGFSSASYTNQASISGHS 530
            F   S     + PKIFGH+LSLG+ K + +TI+FSPKVE+ D GF+S SY  QA    H+
Sbjct: 227  FGESSPGQAKVFPKIFGHELSLGDTKSQSITISFSPKVED-DPGFTSDSYEVQALGVNHA 285

Query: 531  NGLADQEYATYPNECPIEENNEDKFFLQRNHNLPGGLNPQVKILSSDQSLKDESS-RPDE 707
             G +            + + NE   F Q N  + G  N Q ++   D   +D SS   DE
Sbjct: 286  YGNSSNG--------TLGDGNEGTLFPQLNQMMAGNFNAQARVPCLDLGNEDSSSIHADE 337

Query: 708  RKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITY 887
            RKP+KRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIT+
Sbjct: 338  RKPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITF 397

Query: 888  ITDLQMKIRVLETEKEMTRNNNQKQPLVPDIDVQTRQEDTVVRVSCPLDAHPVSRVIRAF 1067
            ITDLQMKI+VLE EK M  N +QK  L PD+D Q R++DTVV V CPLD HPVS V++ F
Sbjct: 398  ITDLQMKIKVLEAEKNMGNNKDQKLSL-PDMDFQEREDDTVVTVRCPLDIHPVSNVVKTF 456

Query: 1068 QETQVAVHESEVSTTDNDSVLHTFSIRTQGG--ASEHLKERLIAALSR 1205
            +E Q+   +S VST D D ++HTFSIRT+GG  A+  LKE+L A+LS+
Sbjct: 457  REHQIVAQDSNVSTAD-DKIIHTFSIRTEGGEAAAIQLKEKLEASLSK 503