BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006937
         (813 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275752.1| PREDICTED: thylakoid lumenal 19 kDa protein,...   286   3e-75
emb|CAN69573.1| hypothetical protein VITISV_028610 [Vitis vinifera]   284   1e-74
ref|XP_003599124.1| Thylakoid lumenal 19 kDa protein [Medicago t...   283   3e-74
gb|AFK43236.1| unknown [Medicago truncatula]                          283   4e-74
ref|XP_002313298.1| predicted protein [Populus trichocarpa] gi|2...   281   9e-74

>ref|XP_002275752.1| PREDICTED: thylakoid lumenal 19 kDa protein, chloroplastic-like
           [Vitis vinifera]
          Length = 247

 Score =  286 bits (733), Expect = 3e-75
 Identities = 139/198 (70%), Positives = 159/198 (80%)
 Frame = -1

Query: 672 LSVAFATAAATVILSTSAPSFADPTTSYNIXXXXXXXXXXXXXXXXXXSKKDSAEYVYDV 493
           L V     AA ++L+T+ PS ADP  SYNI                  +++DSAEYVYDV
Sbjct: 49  LIVTLTATAAALVLTTTPPSLADPPKSYNIYYGTAASAANYGGYGGNSNRQDSAEYVYDV 108

Query: 492 PDGWKERLVSKVEKGTNGTDSEFYNPKKRTEKEYLTYLSGFRQLAPKDAVLNNLALSDVN 313
           PDGWKERLVSKVEKGTNGTDSEFYNPKK++EKEYLT+LSGFRQLAPKD VLNNLALSDV+
Sbjct: 109 PDGWKERLVSKVEKGTNGTDSEFYNPKKKSEKEYLTFLSGFRQLAPKDVVLNNLALSDVS 168

Query: 312 LQDLISSADDVRSEERKDDKGQVYYVYEIDGVSARSLISVTCANNKLYAHFVNAPTPEWN 133
           LQDLISSAD V+SEE+KD+KGQVYYVYEIDGV A SLISVTCA NKLYAHFVNAP PEW 
Sbjct: 169 LQDLISSADSVKSEEKKDEKGQVYYVYEIDGVGAHSLISVTCAKNKLYAHFVNAPAPEWT 228

Query: 132 RDQEMIKHIHESFRTIDS 79
           RD++ + H+HESF+T+ S
Sbjct: 229 RDKDTLMHLHESFKTVGS 246


>emb|CAN69573.1| hypothetical protein VITISV_028610 [Vitis vinifera]
          Length = 248

 Score =  284 bits (727), Expect = 1e-74
 Identities = 138/198 (69%), Positives = 158/198 (79%)
 Frame = -1

Query: 672 LSVAFATAAATVILSTSAPSFADPTTSYNIXXXXXXXXXXXXXXXXXXSKKDSAEYVYDV 493
           L V     AA ++L+ + PS ADP  SYNI                  +++DSAEYVYDV
Sbjct: 50  LIVTLTATAAALVLTITPPSLADPPKSYNIYYGTAASAANYGGYGGNSNRQDSAEYVYDV 109

Query: 492 PDGWKERLVSKVEKGTNGTDSEFYNPKKRTEKEYLTYLSGFRQLAPKDAVLNNLALSDVN 313
           PDGWKERLVSKVEKGTNGTDSEFYNPKK++EKEYLT+LSGFRQLAPKD VLNNLALSDV+
Sbjct: 110 PDGWKERLVSKVEKGTNGTDSEFYNPKKKSEKEYLTFLSGFRQLAPKDVVLNNLALSDVS 169

Query: 312 LQDLISSADDVRSEERKDDKGQVYYVYEIDGVSARSLISVTCANNKLYAHFVNAPTPEWN 133
           LQDLISSAD V+SEE+KD+KGQVYYVYEIDGV A SLISVTCA NKLYAHFVNAP PEW 
Sbjct: 170 LQDLISSADSVKSEEKKDEKGQVYYVYEIDGVGAHSLISVTCAKNKLYAHFVNAPAPEWT 229

Query: 132 RDQEMIKHIHESFRTIDS 79
           RD++ + H+HESF+T+ S
Sbjct: 230 RDKDTLMHLHESFKTVGS 247


>ref|XP_003599124.1| Thylakoid lumenal 19 kDa protein [Medicago truncatula]
           gi|355488172|gb|AES69375.1| Thylakoid lumenal 19 kDa
           protein [Medicago truncatula]
          Length = 242

 Score =  283 bits (724), Expect = 3e-74
 Identities = 145/227 (63%), Positives = 168/227 (74%), Gaps = 9/227 (3%)
 Frame = -1

Query: 738 SFTKTQSVSAYRLTNTESSLNVLSVAF---------ATAAATVILSTSAPSFADPTTSYN 586
           S T T + +    T T  S  +LS            A AA   IL+TS PS A  ++ YN
Sbjct: 15  SSTTTTTTTTTTTTTTTISKPLLSFKLKQPLTTTLTAAAAIATILTTSPPSIAAESSPYN 74

Query: 585 IXXXXXXXXXXXXXXXXXXSKKDSAEYVYDVPDGWKERLVSKVEKGTNGTDSEFYNPKKR 406
           I                  +KKDSAEY+YDVP+GWKERL+SKVEKGTNGTDSEFYNPKKR
Sbjct: 75  IYYGTAASAANYGGYGGNSNKKDSAEYIYDVPEGWKERLISKVEKGTNGTDSEFYNPKKR 134

Query: 405 TEKEYLTYLSGFRQLAPKDAVLNNLALSDVNLQDLISSADDVRSEERKDDKGQVYYVYEI 226
           TEKEYLT+LSGFRQLAPKDAVLNNLALSDVNLQD+IS AD+V SEE KD+ GQVYYVYEI
Sbjct: 135 TEKEYLTFLSGFRQLAPKDAVLNNLALSDVNLQDIISGADNVSSEEVKDENGQVYYVYEI 194

Query: 225 DGVSARSLISVTCANNKLYAHFVNAPTPEWNRDQEMIKHIHESFRTI 85
           DGV+  SLISVTCANNKLYAHFVNAPTPEWN+D++++ H+H+SF+TI
Sbjct: 195 DGVAYHSLISVTCANNKLYAHFVNAPTPEWNKDKDLLTHVHKSFKTI 241


>gb|AFK43236.1| unknown [Medicago truncatula]
          Length = 241

 Score =  283 bits (723), Expect = 4e-74
 Identities = 137/196 (69%), Positives = 158/196 (80%)
 Frame = -1

Query: 672 LSVAFATAAATVILSTSAPSFADPTTSYNIXXXXXXXXXXXXXXXXXXSKKDSAEYVYDV 493
           L+     AA   IL+TS PS A  ++ YNI                  +KKDSAEY+YDV
Sbjct: 45  LTTTLTAAAIATILTTSPPSIAAESSPYNIYYGTAASAANYGGYGGNSNKKDSAEYIYDV 104

Query: 492 PDGWKERLVSKVEKGTNGTDSEFYNPKKRTEKEYLTYLSGFRQLAPKDAVLNNLALSDVN 313
           P+GWKERL+SKVEKGTNGTDSEFYNPKKRTEKEYLT+LSGFRQLAPKDAVLNNLALSDVN
Sbjct: 105 PEGWKERLISKVEKGTNGTDSEFYNPKKRTEKEYLTFLSGFRQLAPKDAVLNNLALSDVN 164

Query: 312 LQDLISSADDVRSEERKDDKGQVYYVYEIDGVSARSLISVTCANNKLYAHFVNAPTPEWN 133
           LQD+IS AD+V SEE KD+ GQVYYVYEIDGV+  SLISVTCANNKLYAHFVNAPTPEWN
Sbjct: 165 LQDIISGADNVSSEEVKDENGQVYYVYEIDGVAYHSLISVTCANNKLYAHFVNAPTPEWN 224

Query: 132 RDQEMIKHIHESFRTI 85
           +D++++ H+H+SF+TI
Sbjct: 225 KDKDLLTHVHKSFKTI 240


>ref|XP_002313298.1| predicted protein [Populus trichocarpa] gi|222849706|gb|EEE87253.1|
           predicted protein [Populus trichocarpa]
          Length = 237

 Score =  281 bits (720), Expect = 9e-74
 Identities = 141/215 (65%), Positives = 163/215 (75%)
 Frame = -1

Query: 729 KTQSVSAYRLTNTESSLNVLSVAFATAAATVILSTSAPSFADPTTSYNIXXXXXXXXXXX 550
           +T S+S   L  +  +   L+   AT AAT IL+ + PS ADP+ +++I           
Sbjct: 22  QTPSLSKTHLPISPPNKPHLTTLAATIAATTILTATTPSLADPSQTFHIYYGTAASAANY 81

Query: 549 XXXXXXXSKKDSAEYVYDVPDGWKERLVSKVEKGTNGTDSEFYNPKKRTEKEYLTYLSGF 370
                   KK SAEYVYDVPDGWKERLVSKVEKGTNGTDSEFYNPKKRTEKEYLTYL+GF
Sbjct: 82  GGYGGNSDKKASAEYVYDVPDGWKERLVSKVEKGTNGTDSEFYNPKKRTEKEYLTYLAGF 141

Query: 369 RQLAPKDAVLNNLALSDVNLQDLISSADDVRSEERKDDKGQVYYVYEIDGVSARSLISVT 190
           RQLAPKD+VLNNLALSDV+LQDLIS AD V S E KD  GQ+YYVYEIDGV   SLI VT
Sbjct: 142 RQLAPKDSVLNNLALSDVDLQDLISGADSVVSVEEKDGNGQLYYVYEIDGVGKHSLIKVT 201

Query: 189 CANNKLYAHFVNAPTPEWNRDQEMIKHIHESFRTI 85
           CANNKLYAHFVNAPTPEWN+DQE ++H+H+SF+T+
Sbjct: 202 CANNKLYAHFVNAPTPEWNKDQETLRHLHQSFKTV 236