BLASTX nr result

ID: Coptis21_contig00006934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006934
         (1353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274385.2| PREDICTED: uroporphyrinogen decarboxylase, c...   655   0.0  
ref|XP_004165424.1| PREDICTED: uroporphyrinogen decarboxylase, c...   639   0.0  
ref|XP_004146448.1| PREDICTED: uroporphyrinogen decarboxylase, c...   639   0.0  
ref|XP_002520842.1| uroporphyrinogen decarboxylase, putative [Ri...   639   0.0  
gb|AFK49509.1| unknown [Lotus japonicus]                              635   e-179

>ref|XP_002274385.2| PREDICTED: uroporphyrinogen decarboxylase, chloroplastic-like [Vitis
            vinifera] gi|297736517|emb|CBI25388.3| unnamed protein
            product [Vitis vinifera]
          Length = 392

 Score =  655 bits (1690), Expect = 0.0
 Identities = 333/394 (84%), Positives = 360/394 (91%)
 Frame = -3

Query: 1282 MSCVYXXXXXXXSTVRNTPKTNSFYSTSRSKLKINCTALGETAAETKSVSAAEPLLLAAV 1103
            MSC+Y       S +  + ++ S  S S SK +I C ALG T AE   ++A EPLLL AV
Sbjct: 1    MSCIYSSSISSFSALSTSLRSRS-PSPSNSKPRIYC-ALGGTVAEPIIINATEPLLLTAV 58

Query: 1102 RGENVERPPVWLMRQAGRYMKSYQNICQKYPSFRERSENVDLVVEISLQPWKVFKPDGVI 923
            RGE+VERPPVWLMRQAGRYMKSYQ IC+KYPSFRERSENVDLVVEISLQPWKVFKPDGVI
Sbjct: 59   RGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWKVFKPDGVI 118

Query: 922  LFSDILTPLSGMNIPFDIVKGKGPLIFNPVKEASDVNEVREFVPEESVPYVGEALTILRK 743
            LFSDILTPLSGMNIPFDI+KGKGP+IFNP++ A DV +VREFVPE+SVPYVGEALTILRK
Sbjct: 119  LFSDILTPLSGMNIPFDIIKGKGPVIFNPLRTADDVEQVREFVPEDSVPYVGEALTILRK 178

Query: 742  EVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKKLAFSQPKVLHALLQKFTDSMAKYI 563
            EV+N AAVLGFVGAPFTLASYVVEGGSSKHFSKIK+LAFSQPKVLHALLQKFT SMAKYI
Sbjct: 179  EVDNAAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLQKFTTSMAKYI 238

Query: 562  QYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKKTHPDLPLILYASGSGGL 383
            QYQAD+GAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVK+THP+LPLILYASGSGGL
Sbjct: 239  QYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKQTHPNLPLILYASGSGGL 298

Query: 382  LERLPLTGVDVVSLDWTVDMAEGRRRLGPNVAVQGNVDPGVLFGSKEFITSRIHDTVKKA 203
            LERLPLTGVDVVSLDWTVDMAEGRRRLG +VAVQGN+DPGVLFGSKEFIT+RI+DTV+KA
Sbjct: 299  LERLPLTGVDVVSLDWTVDMAEGRRRLGTDVAVQGNIDPGVLFGSKEFITNRINDTVRKA 358

Query: 202  GKGKHILNLGHGIVVGTPEENVAHFFEVAQAIRY 101
            GKGKHILNLGHGIVVGTPEENVAHFFEVA+ IRY
Sbjct: 359  GKGKHILNLGHGIVVGTPEENVAHFFEVARGIRY 392


>ref|XP_004165424.1| PREDICTED: uroporphyrinogen decarboxylase, chloroplastic-like
            [Cucumis sativus]
          Length = 392

 Score =  639 bits (1647), Expect = 0.0
 Identities = 318/364 (87%), Positives = 344/364 (94%)
 Frame = -3

Query: 1192 KLKINCTALGETAAETKSVSAAEPLLLAAVRGENVERPPVWLMRQAGRYMKSYQNICQKY 1013
            K +I+C+ LG T AE K  ++AEPLLL AVRGE+VERPPVWLMRQAGRYMKSYQ IC+KY
Sbjct: 30   KPRIHCS-LGGTVAEPKPTTSAEPLLLNAVRGEDVERPPVWLMRQAGRYMKSYQVICEKY 88

Query: 1012 PSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPLIFNPV 833
            PSFR+RSEN DLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGP+I NP+
Sbjct: 89   PSFRQRSENTDLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPIIANPI 148

Query: 832  KEASDVNEVREFVPEESVPYVGEALTILRKEVNNEAAVLGFVGAPFTLASYVVEGGSSKH 653
             EA+ V++VREF+PEE+VPYVGEALTILRKEV+N+AAVLGFVGAPFTLASYVVEGGSSKH
Sbjct: 149  SEAAQVDQVREFIPEENVPYVGEALTILRKEVDNKAAVLGFVGAPFTLASYVVEGGSSKH 208

Query: 652  FSKIKKLAFSQPKVLHALLQKFTDSMAKYIQYQADSGAQAVQIFDSWATELSPVDFEEFS 473
            FSKIK+LAFSQPKVLHALLQKFT SMA+Y+QYQAD GAQAVQIFDSWATELSPVDFEEFS
Sbjct: 209  FSKIKRLAFSQPKVLHALLQKFTSSMARYVQYQADRGAQAVQIFDSWATELSPVDFEEFS 268

Query: 472  LPYLKQIVDSVKKTHPDLPLILYASGSGGLLERLPLTGVDVVSLDWTVDMAEGRRRLGPN 293
            LPYLKQIV+SVKKTHP+LPLILYASGSGGLLERL  TGVDVVSLDWTVDMAEGRRRLG +
Sbjct: 269  LPYLKQIVESVKKTHPNLPLILYASGSGGLLERLASTGVDVVSLDWTVDMAEGRRRLGAD 328

Query: 292  VAVQGNVDPGVLFGSKEFITSRIHDTVKKAGKGKHILNLGHGIVVGTPEENVAHFFEVAQ 113
            +AVQGNVDPGVLFGSKEFIT RI+DTVKKAGKGKHILNLGHGIVVGTPEENVAHFFEVA+
Sbjct: 329  IAVQGNVDPGVLFGSKEFITERINDTVKKAGKGKHILNLGHGIVVGTPEENVAHFFEVAK 388

Query: 112  AIRY 101
             IRY
Sbjct: 389  GIRY 392


>ref|XP_004146448.1| PREDICTED: uroporphyrinogen decarboxylase, chloroplastic-like
            [Cucumis sativus]
          Length = 392

 Score =  639 bits (1647), Expect = 0.0
 Identities = 318/364 (87%), Positives = 344/364 (94%)
 Frame = -3

Query: 1192 KLKINCTALGETAAETKSVSAAEPLLLAAVRGENVERPPVWLMRQAGRYMKSYQNICQKY 1013
            K +I+C+ LG T AE K  ++AEPLLL AVRGE+VERPPVWLMRQAGRYMKSYQ IC+KY
Sbjct: 30   KPRIHCS-LGGTVAEPKPTTSAEPLLLNAVRGEDVERPPVWLMRQAGRYMKSYQVICEKY 88

Query: 1012 PSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPLIFNPV 833
            PSFR+RSEN DLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGP+I NP+
Sbjct: 89   PSFRQRSENTDLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPIIANPI 148

Query: 832  KEASDVNEVREFVPEESVPYVGEALTILRKEVNNEAAVLGFVGAPFTLASYVVEGGSSKH 653
             EA+ V++VREF+PEE+VPYVGEALTILRKEV+N+AAVLGFVGAPFTLASYVVEGGSSKH
Sbjct: 149  SEAAQVDQVREFIPEENVPYVGEALTILRKEVDNKAAVLGFVGAPFTLASYVVEGGSSKH 208

Query: 652  FSKIKKLAFSQPKVLHALLQKFTDSMAKYIQYQADSGAQAVQIFDSWATELSPVDFEEFS 473
            FSKIK+LAFSQPKVLHALLQKFT SMA+Y+QYQAD GAQAVQIFDSWATELSPVDFEEFS
Sbjct: 209  FSKIKRLAFSQPKVLHALLQKFTSSMARYVQYQADRGAQAVQIFDSWATELSPVDFEEFS 268

Query: 472  LPYLKQIVDSVKKTHPDLPLILYASGSGGLLERLPLTGVDVVSLDWTVDMAEGRRRLGPN 293
            LPYLKQIV+SVKKTHP+LPLILYASGSGGLLERL  TGVDVVSLDWTVDMAEGRRRLG +
Sbjct: 269  LPYLKQIVESVKKTHPNLPLILYASGSGGLLERLASTGVDVVSLDWTVDMAEGRRRLGAD 328

Query: 292  VAVQGNVDPGVLFGSKEFITSRIHDTVKKAGKGKHILNLGHGIVVGTPEENVAHFFEVAQ 113
            +AVQGNVDPGVLFGSKEFIT RI+DTVKKAGKGKHILNLGHGIVVGTPEENVAHFFEVA+
Sbjct: 329  IAVQGNVDPGVLFGSKEFITKRINDTVKKAGKGKHILNLGHGIVVGTPEENVAHFFEVAK 388

Query: 112  AIRY 101
             IRY
Sbjct: 389  GIRY 392


>ref|XP_002520842.1| uroporphyrinogen decarboxylase, putative [Ricinus communis]
            gi|223539973|gb|EEF41551.1| uroporphyrinogen
            decarboxylase, putative [Ricinus communis]
          Length = 389

 Score =  639 bits (1647), Expect = 0.0
 Identities = 323/398 (81%), Positives = 356/398 (89%), Gaps = 4/398 (1%)
 Frame = -3

Query: 1282 MSCVYXXXXXXXSTVRNTPKTNSFYSTSRSKLK----INCTALGETAAETKSVSAAEPLL 1115
            MSC+         ++ +    ++ YS+ R  +     I+C+  G T AE K  S AEPLL
Sbjct: 1    MSCI--------CSISSISSFSTLYSSPRKSVSKPPIIHCSLPG-TVAEPKPASVAEPLL 51

Query: 1114 LAAVRGENVERPPVWLMRQAGRYMKSYQNICQKYPSFRERSENVDLVVEISLQPWKVFKP 935
            L AVRGE+VERPPVWLMRQAGRYMKSYQ IC+KYPSFRERSENVDLVVEISLQPW VFKP
Sbjct: 52   LNAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWNVFKP 111

Query: 934  DGVILFSDILTPLSGMNIPFDIVKGKGPLIFNPVKEASDVNEVREFVPEESVPYVGEALT 755
            DGVILFSDILTPLSGMNIPFDIVKGKGP+IFNP++ A DV++VREFVPEESVPYVGE+LT
Sbjct: 112  DGVILFSDILTPLSGMNIPFDIVKGKGPIIFNPLRTAEDVDQVREFVPEESVPYVGESLT 171

Query: 754  ILRKEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKKLAFSQPKVLHALLQKFTDSM 575
            ILRKEV+N+AAVLGFVGAPFTLASY VEGGSSKHFSKIK+LAFSQP+VLHALLQKF  SM
Sbjct: 172  ILRKEVDNKAAVLGFVGAPFTLASYCVEGGSSKHFSKIKRLAFSQPEVLHALLQKFATSM 231

Query: 574  AKYIQYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKKTHPDLPLILYASG 395
            AKY+QYQAD+GAQAVQIFDSWATELSPVDFE+FSLPYLKQIVD+VKKTHP+LPLILYASG
Sbjct: 232  AKYVQYQADNGAQAVQIFDSWATELSPVDFEQFSLPYLKQIVDTVKKTHPNLPLILYASG 291

Query: 394  SGGLLERLPLTGVDVVSLDWTVDMAEGRRRLGPNVAVQGNVDPGVLFGSKEFITSRIHDT 215
            SGGLLERL LTGVDVVSLDWTVDMAEGRRRLGP++AVQGNVDPGVLFGSKEFIT+RI+D 
Sbjct: 292  SGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDMAVQGNVDPGVLFGSKEFITNRINDV 351

Query: 214  VKKAGKGKHILNLGHGIVVGTPEENVAHFFEVAQAIRY 101
            V+KAGKGKHILNLGHGIVVGTPEENVAHFFEVA+ IRY
Sbjct: 352  VRKAGKGKHILNLGHGIVVGTPEENVAHFFEVAKGIRY 389


>gb|AFK49509.1| unknown [Lotus japonicus]
          Length = 390

 Score =  635 bits (1637), Expect = e-179
 Identities = 316/367 (86%), Positives = 343/367 (93%)
 Frame = -3

Query: 1201 SRSKLKINCTALGETAAETKSVSAAEPLLLAAVRGENVERPPVWLMRQAGRYMKSYQNIC 1022
            S S+  I+CT  G T AE K  +AAEPLLL AVRG +VERPPVWLMRQAGRYMKSYQ IC
Sbjct: 25   SNSRNPISCTLPG-TVAEPKLTAAAEPLLLNAVRGLDVERPPVWLMRQAGRYMKSYQTIC 83

Query: 1021 QKYPSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPLIF 842
            +K+PSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGP+IF
Sbjct: 84   EKHPSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPVIF 143

Query: 841  NPVKEASDVNEVREFVPEESVPYVGEALTILRKEVNNEAAVLGFVGAPFTLASYVVEGGS 662
            +P+  A+ V++V EF+P+ SVPYVGEALTILRKEV+N+AAVLGFVGAPFTLASYVVEGGS
Sbjct: 144  DPIHSAAQVDQVTEFIPQGSVPYVGEALTILRKEVDNKAAVLGFVGAPFTLASYVVEGGS 203

Query: 661  SKHFSKIKKLAFSQPKVLHALLQKFTDSMAKYIQYQADSGAQAVQIFDSWATELSPVDFE 482
            SKHFSKIK+LAFSQPKVLH+LLQKFT SMA+YIQYQAD+GAQAVQIFDSWATELSPVDFE
Sbjct: 204  SKHFSKIKRLAFSQPKVLHSLLQKFTTSMARYIQYQADNGAQAVQIFDSWATELSPVDFE 263

Query: 481  EFSLPYLKQIVDSVKKTHPDLPLILYASGSGGLLERLPLTGVDVVSLDWTVDMAEGRRRL 302
            EFSLPYLKQIVD+VKKTHP+LPLILYASGSGGLLERL LTGVDVVSLDWTVDMA+GRRRL
Sbjct: 264  EFSLPYLKQIVDTVKKTHPELPLILYASGSGGLLERLALTGVDVVSLDWTVDMADGRRRL 323

Query: 301  GPNVAVQGNVDPGVLFGSKEFITSRIHDTVKKAGKGKHILNLGHGIVVGTPEENVAHFFE 122
            GPN+ VQGNVDPGVLFGSKE IT RIHDTV+KAG+GKHILNLGHGIVVGTPEENVAHFFE
Sbjct: 324  GPNITVQGNVDPGVLFGSKEIITDRIHDTVRKAGRGKHILNLGHGIVVGTPEENVAHFFE 383

Query: 121  VAQAIRY 101
            VA+ IRY
Sbjct: 384  VAKGIRY 390


Top