BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006917
         (2985 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-...   956   0.0  
emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]   954   0.0  
ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-...   844   0.0  
ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-...   805   0.0  
ref|XP_002519884.1| replication factor A 1, rfa1, putative [Rici...   791   0.0  

>ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Vitis vinifera]
          Length = 882

 Score =  956 bits (2471), Expect = 0.0
 Identities = 498/838 (59%), Positives = 613/838 (73%), Gaps = 28/838 (3%)
 Frame = -3

Query: 2839 INLTNNAIAMICNGELQAEEDMKPVLQVYDIKLLSAGQQS-SNERYRMLLSDGLHSQQSM 2663
            +NLT  AI+M+C+G+ Q   D+KPVLQV DI+L++  QQS SNER+R+LLSDG H QQ M
Sbjct: 3    VNLTEGAISMLCSGDAQGS-DVKPVLQVADIRLVNTQQQSNSNERFRILLSDGCHLQQGM 61

Query: 2662 LATQLNHLIHSGKLQKGSIVRLSQFVSQTIQNRKXXXXIGLDVIFENCDQIGEPKLYVDG 2483
            LATQ N L+ SG+LQKGS+V+L+QFV   I++R     I LDVI E CD IGEPK YV G
Sbjct: 62   LATQRNELVKSGRLQKGSVVQLTQFVCNVIKDRMIIIIIDLDVILEKCDPIGEPKQYVQG 121

Query: 2482 -------PQVRTSIPGQASVGHPGTASVNPQXXXXXXXXXXXXXXXXXXANVIGRASLHQ 2324
                   P  RTS P  +SV HPGT   NPQ                   + +   S  +
Sbjct: 122  GTAGGVAPIARTSAPMPSSVDHPGTVLGNPQSFGN---------------SSLTGGSAAK 166

Query: 2323 PKPEPRANPQSYGSSFSGNPDSRVFSTTNGPSMYPKAESGARHPQS--TSGKYGDQTGNY 2150
            P     A+P  + +SFS NPDS  F+ TN P MY K +  A  P S  ++G YGDQ+  +
Sbjct: 167  PNMAGVASPY-HANSFSSNPDSGRFAGTNAPPMYSKMQPDAGIPASAASTGSYGDQSTGF 225

Query: 2149 VNRNDGGSRAPLNTYGRPMLSTYQQPPPTYMNRGPVARNDMTVRTIPIADLNPYQGRWTI 1970
             N     SRAP N   R   S YQQPPP Y NRGPVARN+   R IPIA LNPYQGRWTI
Sbjct: 226  RNNKVEVSRAPYNAPARQPQSAYQQPPPMYTNRGPVARNEAAARIIPIAALNPYQGRWTI 285

Query: 1969 KARVTSKTILKSYSNARGEGKVFSFDLLDSEGGEIQATCFNMAAEQFYGMIEAGRVYLIS 1790
            KARVT+K  L+ Y+N RG+GKVFSFDLLDS+GGEI+ TCFN  A+QFY  IE G+VYLIS
Sbjct: 286  KARVTAKGELRHYNNPRGDGKVFSFDLLDSDGGEIRVTCFNAVADQFYNQIETGKVYLIS 345

Query: 1789 KGSLKPASKTFNHLNNDFCISLDIGATVQPCAEDDDSIPMQQFHFRSIADIENMDNNTML 1610
            KGSLKPA KTFNHL ND  I L+  +T+QPC +DD+SIP QQFHFRSI+D+E+M+NN+++
Sbjct: 346  KGSLKPAQKTFNHLRNDHEIFLESTSTIQPCFDDDNSIPRQQFHFRSISDVESMENNSVV 405

Query: 1609 DVIGVVSSISLTVSIMKKDGTETLKRSLQLKDMSGRSVEVTLWGNFCNAEGQQLQSLRDS 1430
            DVIGVVS IS + SIM+K+GTET KR+L LKDMSGRSVE+TLWGNFCNAEGQ+LQ++ DS
Sbjct: 406  DVIGVVSFISPSASIMRKNGTETQKRALHLKDMSGRSVELTLWGNFCNAEGQRLQNMCDS 465

Query: 1429 GKYPVLAVKAGRINDFNGKAVGTLSNSQLFVNPEIPEARTLREWFDTEGKDITSVSISRE 1250
            G +PVLAVK+ R+NDFNGKAVGT+S SQLF+ P+ PEAR L+EWFD EG++  SVSISRE
Sbjct: 466  GVFPVLAVKSARVNDFNGKAVGTISTSQLFIEPDFPEARKLKEWFDKEGRNTPSVSISRE 525

Query: 1249 TVGVGRIDVRKTVSQIKDEQLGTSEKPDWITVKATINFIKVDNFCYTACPLMVGERQCNK 1070
               +GR DVRKT+SQIKDE+LGTSEKPDWITV AT++FIKVDNFCYTACP+M+G+RQCNK
Sbjct: 526  VTSMGRTDVRKTISQIKDERLGTSEKPDWITVCATVSFIKVDNFCYTACPIMIGDRQCNK 585

Query: 1069 KVNNNGDGQYRCEKCDQSVAQCDYRYILQFQIKDHTGLTWVTAFQECGEEIIGVSAKELY 890
            KV NNGDG++RCE+CDQSV  CDYRYILQFQI+DHTGLTWVTAFQECGEEI+G+SAK LY
Sbjct: 586  KVTNNGDGKWRCERCDQSVDDCDYRYILQFQIQDHTGLTWVTAFQECGEEIMGISAKNLY 645

Query: 889  DLKHE--DEDSFGDAIRRVMFTDYVFKLKVKEETFSDEQRVKSTVVKAEKLDVSSESRFL 716
             LK+E  D++ FG+ +R V+FT Y FKLKVKEE FSDEQRVKSTVVKAEK++ SSESRFL
Sbjct: 646  YLKYEEQDDEKFGEILRGVLFTKYSFKLKVKEEIFSDEQRVKSTVVKAEKVNFSSESRFL 705

Query: 715  LDMINRLVEDHNAFLGKAANVVMESGMISTGL---GVNQAS-MMNSTGMRTN-------- 572
            LDM+ +   + + F  K+ NV+   GM + GL   G+ Q++  +N +G  +N        
Sbjct: 706  LDMVEKHKVEDSTFPLKSENVISNGGMTNPGLGNVGIRQSTPSVNYSGNASNAGRDFGFP 765

Query: 571  ---HVGHGSPYNST-INAIGGTGVSVFCNSCGGTGHNERNCPSIINRQGHPGVSGHVN 410
                V HG+ Y S+ ++A G TG+   CNSCGGTGH+  NCPS+++        G+V+
Sbjct: 766  ANQGVQHGNQYGSSGLSATGSTGMYQSCNSCGGTGHSSSNCPSVMHSPRQSSGGGYVS 823


>emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]
          Length = 882

 Score =  954 bits (2465), Expect = 0.0
 Identities = 497/838 (59%), Positives = 612/838 (73%), Gaps = 28/838 (3%)
 Frame = -3

Query: 2839 INLTNNAIAMICNGELQAEEDMKPVLQVYDIKLLSAGQQS-SNERYRMLLSDGLHSQQSM 2663
            +NLT  AI+M+C+G+ Q   D+KPVLQV DI+L++  QQS SNER+R+LLSDG H QQ M
Sbjct: 3    VNLTEGAISMLCSGDAQGS-DVKPVLQVADIRLVNTQQQSNSNERFRILLSDGCHLQQGM 61

Query: 2662 LATQLNHLIHSGKLQKGSIVRLSQFVSQTIQNRKXXXXIGLDVIFENCDQIGEPKLYVDG 2483
            LATQ N L+ SG+LQKGS+V+L+QFV   I++R     I LDVI E CD IGEPK YV G
Sbjct: 62   LATQRNELVKSGRLQKGSVVQLTQFVCNVIKDRMIIIIIDLDVILEKCDPIGEPKQYVQG 121

Query: 2482 -------PQVRTSIPGQASVGHPGTASVNPQXXXXXXXXXXXXXXXXXXANVIGRASLHQ 2324
                   P  RTS P  +SV HPGT   NPQ                   + +   S  +
Sbjct: 122  GTAGGVAPIARTSAPMPSSVDHPGTVLGNPQSFGN---------------SSLTGGSAAK 166

Query: 2323 PKPEPRANPQSYGSSFSGNPDSRVFSTTNGPSMYPKAESGARHPQS--TSGKYGDQTGNY 2150
            P     A+P  + +SFS NPDS  F+ TN P MY K +  A  P S  ++G YGDQ+  +
Sbjct: 167  PNMAGVASPY-HANSFSSNPDSGRFAGTNAPPMYSKMQPDAGIPASAASTGSYGDQSTGF 225

Query: 2149 VNRNDGGSRAPLNTYGRPMLSTYQQPPPTYMNRGPVARNDMTVRTIPIADLNPYQGRWTI 1970
             N     SRAP N   R   S YQQPPP Y NRGPVARN+   R IPIA LNPYQGRWTI
Sbjct: 226  RNNKVEVSRAPYNAPARQPQSAYQQPPPMYTNRGPVARNEAXARIIPIAALNPYQGRWTI 285

Query: 1969 KARVTSKTILKSYSNARGEGKVFSFDLLDSEGGEIQATCFNMAAEQFYGMIEAGRVYLIS 1790
            KARVT+K  L+ Y+N RG+GKVFSFDLLDS+GGEI+ TCFN  A+QFY  IE G+VYLIS
Sbjct: 286  KARVTAKGELRHYNNPRGDGKVFSFDLLDSDGGEIRVTCFNAVADQFYNQIETGKVYLIS 345

Query: 1789 KGSLKPASKTFNHLNNDFCISLDIGATVQPCAEDDDSIPMQQFHFRSIADIENMDNNTML 1610
            KGSLKPA KTFNHL ND  I L+  +T+QPC +DD+SIP QQFHFR I+D+E+M+NN+++
Sbjct: 346  KGSLKPAQKTFNHLRNDHEIFLESTSTIQPCFDDDNSIPRQQFHFRXISDVESMENNSVV 405

Query: 1609 DVIGVVSSISLTVSIMKKDGTETLKRSLQLKDMSGRSVEVTLWGNFCNAEGQQLQSLRDS 1430
            DVIGVVS IS + SIM+K+GTET KR+L LKDMSGRSVE+TLWGNFCNAEGQ+LQ++ DS
Sbjct: 406  DVIGVVSFISPSASIMRKNGTETQKRALHLKDMSGRSVELTLWGNFCNAEGQRLQNMCDS 465

Query: 1429 GKYPVLAVKAGRINDFNGKAVGTLSNSQLFVNPEIPEARTLREWFDTEGKDITSVSISRE 1250
            G +PVLAVK+ R+NDFNGKAVGT+S SQLF+ P+ PEAR L+EWFD EG++  SVSISRE
Sbjct: 466  GVFPVLAVKSARVNDFNGKAVGTISTSQLFIEPDFPEARKLKEWFDKEGRNTPSVSISRE 525

Query: 1249 TVGVGRIDVRKTVSQIKDEQLGTSEKPDWITVKATINFIKVDNFCYTACPLMVGERQCNK 1070
               +GR DVRKT+SQIKDE+LGTSEKPDWITV AT++FIKVDNFCYTACP+M+G+RQCNK
Sbjct: 526  VTXMGRTDVRKTISQIKDERLGTSEKPDWITVCATVSFIKVDNFCYTACPIMIGDRQCNK 585

Query: 1069 KVNNNGDGQYRCEKCDQSVAQCDYRYILQFQIKDHTGLTWVTAFQECGEEIIGVSAKELY 890
            KV NNGDG++RCE+CDQSV  CDYRYILQFQI+DHTGLTWVTAFQECGEEI+G+SAK LY
Sbjct: 586  KVTNNGDGKWRCERCDQSVDDCDYRYILQFQIQDHTGLTWVTAFQECGEEIMGISAKNLY 645

Query: 889  DLKHE--DEDSFGDAIRRVMFTDYVFKLKVKEETFSDEQRVKSTVVKAEKLDVSSESRFL 716
             LK+E  D++ FG+ +R V+FT Y FKLKVKEE FSDEQRVKSTVVKAEK++ SSESRFL
Sbjct: 646  YLKYEEQDDEKFGEILRGVLFTKYSFKLKVKEEIFSDEQRVKSTVVKAEKVNFSSESRFL 705

Query: 715  LDMINRLVEDHNAFLGKAANVVMESGMISTGL---GVNQAS-MMNSTGMRTN-------- 572
            LDM+ +   + + F  K+ NV+   GM + GL   G+ Q++  +N +G  +N        
Sbjct: 706  LDMVEKHKVEDSTFPLKSENVISNGGMTNPGLGNVGIRQSTPSVNYSGNASNAGRDFGFP 765

Query: 571  ---HVGHGSPYNST-INAIGGTGVSVFCNSCGGTGHNERNCPSIINRQGHPGVSGHVN 410
                V HG+ Y S+ ++A G TG+   CNSCGGTGH+  NCPS+++        G+V+
Sbjct: 766  ANQGVQHGNQYGSSGLSATGSTGMXQSCNSCGGTGHSSSNCPSVMHSPRQSSGGGYVS 823


>ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Cucumis sativus]
          Length = 861

 Score =  844 bits (2181), Expect = 0.0
 Identities = 449/820 (54%), Positives = 565/820 (68%), Gaps = 19/820 (2%)
 Frame = -3

Query: 2848 MDDINLTNNAIAMICNGELQAEEDMKPVLQVYDIKLLSAGQQSSNERYRMLLSDGLHSQQ 2669
            M    LT  A+ +IC  E  AE   +P+LQV D+KL++  QQS +ER+R+L+SDG H QQ
Sbjct: 5    MASSKLTEGAVMVICKRESSAET-FQPILQVIDLKLVNTSQQSGSERFRLLVSDGTHFQQ 63

Query: 2668 SMLATQLNHLIHSGKLQKGSIVRLSQFVSQTIQNRKXXXXIGLDVIFENCDQIGEPKLYV 2489
             ML TQLN L+ SGKLQKGSIVRL Q+V   +Q R     I LDVI E CD IGEP    
Sbjct: 64   GMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPVSAT 123

Query: 2488 DGPQVRTSIPGQASVGHPGTASVNPQXXXXXXXXXXXXXXXXXXANVIGRASLHQPKPEP 2309
                   S     SVG  G +  +                       +  AS  QPK   
Sbjct: 124  RSSANALSGNPLPSVGGLGASPGSGMIGKGN----------------VSSASFEQPKVNQ 167

Query: 2308 RANPQSYGSSFSGNPDSRVFSTTNGPSMYPKAESGARH--PQSTSGKYGDQTGNYVNRND 2135
               P     S+S  P++  FS +  P  Y K +SG+R   P   +G YGDQ   Y N   
Sbjct: 168  SHVPHM--GSYSNPPETGRFSASIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGS 225

Query: 2134 GGSRAPLNT--YGRPMLSTYQQPPPTYMNRGPVARNDMTVRTIPIADLNPYQGRWTIKAR 1961
               R PLN+  Y RP    YQQPP  Y NRGP+A+N+   R +PI+ LNPYQGRWTIKAR
Sbjct: 226  DIPRPPLNSNAYARPQ-PIYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKAR 284

Query: 1960 VTSKTILKSYSNARGEGKVFSFDLLDSEGGEIQATCFNMAAEQFYGMIEAGRVYLISKGS 1781
            VTSK  L+ Y+N RG+GKVFSFDLLD+  GEI+ TCFN  A+QFY  IE+G+VY ISKGS
Sbjct: 285  VTSKGELRHYNNPRGDGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGS 344

Query: 1780 LKPASKTFNHLNNDFCISLDIGATVQPCAEDDDSIPMQQFHFRSIADIENMDNNTMLDVI 1601
            LKPA K FNHL ND+ I L+  +T+QPC EDD SIP QQFHF  I +IE MD+N+++DVI
Sbjct: 345  LKPAQKNFNHLKNDYEIFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVI 404

Query: 1600 GVVSSISLTVSIMKKDGTETLKRSLQLKDMSGRSVEVTLWGNFCNAEGQQLQSLRDSGKY 1421
            GVVSSI+   S+M+K+GTET KRSLQLKDMSGRSVE+TLWGNFC AEGQ+LQ++ DSG +
Sbjct: 405  GVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLF 464

Query: 1420 PVLAVKAGRINDFNGKAVGTLSNSQLFVNPEIPEARTLREWFDTEGKDITSVSISRETVG 1241
            PVLAVK+ R++DFNGKAVGT+S SQLF+ P+ PEA +LREWF+ EG+   SVSISRE   
Sbjct: 465  PVLAVKSSRVSDFNGKAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVAS 524

Query: 1240 VGRIDVRKTVSQIKDEQLGTSEKPDWITVKATINFIKVDNFCYTACPLMVGERQCNKKVN 1061
            VGR DVRKT+SQIKDE+LGTSEKPDWITV AT++FIKVD+FCYTACP+M+G+RQC+KKV 
Sbjct: 525  VGRTDVRKTISQIKDERLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVT 584

Query: 1060 NNGDGQYRCEKCDQSVAQCDYRYILQFQIKDHTGLTWVTAFQECGEEIIGVSAKELYDLK 881
            NNGDG++RC++CDQSV +CDYRYILQ QI+DHTGLTWVTAFQE GEEI+G+ AK LY LK
Sbjct: 585  NNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLK 644

Query: 880  HE--DEDSFGDAIRRVMFTDYVFKLKVKEETFSDEQRVKSTVVKAEKLDVSSESRFLLDM 707
            +E  D++ F + IR+V+FT ++ KLK+KEETFSDEQRV+STVVKAE ++ SSESRFLL++
Sbjct: 645  YEEQDDEKFAEIIRKVLFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNL 704

Query: 706  INRL-VEDHNAFLGKAANVVMESGMIST-----GLGVNQASMMNST------GMRTNHVG 563
            + +L  E+ ++   KA + +   G   T     G G   + + NST      G     V 
Sbjct: 705  MEKLKPENSSSATPKAESTIHNFGFRDTASENIGGGQFVSPIRNSTNFSREYGTPNQGVQ 764

Query: 562  HGSPYNST-INAIGGTGVSVFCNSCGGTGHNERNCPSIIN 446
            +G+ Y+S+  +       + +CNSCGG+GH+  NCPSI++
Sbjct: 765  YGNQYSSSRPSPSTPLNSNTYCNSCGGSGHSSTNCPSIMS 804


>ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Glycine max]
          Length = 894

 Score =  805 bits (2078), Expect = 0.0
 Identities = 416/829 (50%), Positives = 563/829 (67%), Gaps = 15/829 (1%)
 Frame = -3

Query: 2839 INLTNNAIAMICNGELQAEEDMKPVLQVYDIKLLSAGQQSSNERYRMLLSDGLHSQQSML 2660
            ++LT +AI  +C+      E ++PVLQV ++KL+ + Q S+ ERYR++LSDG H QQ ML
Sbjct: 3    VSLTQSAIMEMCSAN--CPEGLQPVLQVIELKLVQSQQNSNVERYRLVLSDGSHYQQGML 60

Query: 2659 ATQLNHLIHSGKLQKGSIVRLSQFVSQTIQNRKXXXXIGLDVIFENCDQIGEPKLYVDGP 2480
            ATQ N L+H+GKLQKGS+VRL+QF+   +Q+RK    + LDV+ + C+ IGEP   V  P
Sbjct: 61   ATQKNDLVHAGKLQKGSVVRLTQFICNVVQSRKIIIIVDLDVVLDKCELIGEP---VPAP 117

Query: 2479 QVRTSIPGQASVGHPGTASVNPQXXXXXXXXXXXXXXXXXXANVIGRASLHQPKPE-PRA 2303
            +     P +++ G  G  S NPQ                    +  R ++  P P+ P+ 
Sbjct: 118  K---DAPTESATGQSGVTSGNPQLLNSSSHTG----------GMPARPNVASPSPDHPKV 164

Query: 2302 NPQSYGSSFSGNPDSRVFSTTNGPSMYPKAESGARHPQSTSGKYGDQTGNYVNRNDGGSR 2123
            NP + G          V+S+ N P  YPK E G       SG  G Q   + N     SR
Sbjct: 165  NPSASG----------VYSS-NAPPTYPKVEHGVSRSAPFSGSSGGQNTGFRNPQFEASR 213

Query: 2122 APLNTYGRP-MLSTYQQPPPTYMNRGPVARNDMTVRTIPIADLNPYQGRWTIKARVTSKT 1946
               N+Y RP     Y+QP P Y NR P+ RN+   R IPIA LNPYQ  WTIKARVT K 
Sbjct: 214  PLQNSYARPPQQPMYRQPSPMYTNRAPMGRNEAAPRIIPIAALNPYQSMWTIKARVTFKG 273

Query: 1945 ILKSYSNARGEGKVFSFDLLDSEGGEIQATCFNMAAEQFYGMIEAGRVYLISKGSLKPAS 1766
             L+ Y+NARG+GKVFSFDLLDS+GGEI+ATCFN  A+QFY +IEAG+VYLIS+GS+KPA 
Sbjct: 274  ELRHYTNARGDGKVFSFDLLDSDGGEIRATCFNAVADQFYNVIEAGKVYLISRGSIKPAQ 333

Query: 1765 KTFNHLNNDFCISLDIGATVQPCAEDDDSIPMQQFHFRSIADIENMDNNTMLDVIGVVSS 1586
            K FNHL ND  ++LD+ + +QPC +D+DSIP Q F++R I++IE+++NN+++DVIGVV+S
Sbjct: 334  KNFNHLRNDQELTLDVASIIQPCLDDNDSIPSQTFNYRPISEIESLENNSIVDVIGVVTS 393

Query: 1585 ISLTVSIMKKDGTETLKRSLQLKDMSGRSVEVTLWGNFCNAEGQQLQSLRDSGKYPVLAV 1406
            IS T SIM+K+GTE  KR+LQLKDMSGRSVE+TLWGNFC  EGQ+LQ++ D+G++PVLA 
Sbjct: 394  ISPTASIMRKNGTEVQKRTLQLKDMSGRSVELTLWGNFCIVEGQRLQTICDAGEFPVLAT 453

Query: 1405 KAGRINDFNGKAVGTLSNSQLFVNPEIPEARTLREWFDTEGKDITSVSISRETVGVGRID 1226
            KA R+NDFNGK+VGT++ SQL+V P+ PEA TL+ WF+ EGK + ++SISRE   +G+ D
Sbjct: 454  KAVRVNDFNGKSVGTIATSQLYVEPDFPEACTLKRWFENEGKSVPTLSISREISNLGKTD 513

Query: 1225 VRKTVSQIKDEQLGTSEKPDWITVKATINFIKVDNFCYTACPLMVGERQCNKKVNNNGDG 1046
            VRKT+SQIKDE+LGTSEKPDWI+V A ++ IKVDNFCY  CPL +G+RQCNKKV NN DG
Sbjct: 514  VRKTISQIKDEKLGTSEKPDWISVFAAVSHIKVDNFCYPGCPLKIGDRQCNKKVTNNADG 573

Query: 1045 QYRCEKCDQSVAQCDYRYILQFQIKDHTGLTWVTAFQECGEEIIGVSAKELYDLKHE--D 872
             + CE+C+QS+  CD+RY+L  QI+DHTG+TWVTAFQE GEEI+G+ AK+LY +K+E  D
Sbjct: 574  TWHCERCNQSIDTCDFRYLLSMQIQDHTGITWVTAFQESGEEIMGIPAKDLYYMKYEEQD 633

Query: 871  EDSFGDAIRRVMFTDYVFKLKVKEETFSDEQRVKSTVVKAEKLDVSSESRFLLDMI-NRL 695
            +D F +   +V+FT+Y+FKL++KEE +SDEQR+KST+VKAEK++ +S+SR  L++I N L
Sbjct: 634  DDKFSEIFHKVLFTEYMFKLRIKEEFYSDEQRIKSTIVKAEKVNFASKSRVNLELIFNEL 693

Query: 694  VEDHNAFLGKAANVVMES--GMISTGLGV------NQASMMNSTGMRTNHVG--HGSPYN 545
              + +  +    +V   +  G + TG         + A+     GM  N VG  HG+ Y+
Sbjct: 694  RAEKSKGITIPNSVTNNTRLGSVETGQVTPPAYYKSNANTSRDFGMPANQVGQQHGNQYS 753

Query: 544  STINAIGGTGVSVFCNSCGGTGHNERNCPSIINRQGHPGVSGHVNASHA 398
            +  +A    G    C +CG +GH+   CP+I N  GH    G  N + A
Sbjct: 754  NISSAGAAPGSYTSCTNCGVSGHSSALCPNIRNVPGHSAGGGFANRASA 802


>ref|XP_002519884.1| replication factor A 1, rfa1, putative [Ricinus communis]
            gi|223540930|gb|EEF42488.1| replication factor A 1, rfa1,
            putative [Ricinus communis]
          Length = 901

 Score =  791 bits (2042), Expect = 0.0
 Identities = 420/838 (50%), Positives = 554/838 (66%), Gaps = 37/838 (4%)
 Frame = -3

Query: 2848 MDDINLTNNAIAMICNGELQAEEDMKPVLQVYDIKLLSAGQQSSNERYRMLLSDGLHSQQ 2669
            M ++NL+  AI+ I +G   A E +KP LQV ++K +   Q   +ER+R++LSDG H QQ
Sbjct: 1    MANMNLSEGAISKITSGGATAAE-LKPTLQVTELKQVQTKQPQQSERFRLILSDGSHLQQ 59

Query: 2668 SMLATQLNHLIHSGKLQKGSIVRLSQFVSQTIQNRKXXXXIG--------------LDVI 2531
            +ML TQ+NHL+  G L+ GS+V+L Q+   T+Q R                     L+ I
Sbjct: 60   AMLGTQINHLVKDGNLRPGSVVQLIQYTCTTVQGRMLLGSRSCIGCERNRGRAYLLLNEI 119

Query: 2530 ------FENCDQIGEPKLYVDGPQVRTSIPGQASVGHPGTASVNPQXXXXXXXXXXXXXX 2369
                  F  C  IG P         +T  P   S   P ++  NPQ              
Sbjct: 120  LLGFFSFAKCAIIGNPV-----SAQKTLGPSHPSTDQPVSSPANPQSYGSGSPAGGMVEN 174

Query: 2368 XXXXANVIGRASLHQPKPEPRANPQSYGSSFSGNPDSRVFSTTNGPSMYPKAESGARHPQ 2189
                   +  +SL  P+       Q +GSS   + DS  + TTN P  + KAE G+  P 
Sbjct: 175  PN-----LNVSSLQNPRMN-----QLHGSSHPSSYDSGRYVTTNAPPCHLKAEPGSGLPG 224

Query: 2188 STS--GKYGDQTGNYVNRNDGGSRAPLNTYGRPMLSTYQQPPPTYMNRGPVARNDMTVRT 2015
            S S    Y +Q+  + N      +    TY  P    YQQPPP Y NRGPVA+N+   R 
Sbjct: 225  SASMNRSYNEQSAGFCNPRPEIPQTT-GTYPYPPCPAYQQPPPMYSNRGPVAKNEAPPRI 283

Query: 2014 IPIADLNPYQGRWTIKARVTSKTILKSYSNARGEGKVFSFDLLDSEGGEIQATCFNMAAE 1835
            +PI+ LNPYQGRWTIKARVT+K  L+ Y+N RG+GKVFSFDLLDS+GGEI+  CFN  A+
Sbjct: 284  MPISALNPYQGRWTIKARVTAKGELRHYNNVRGDGKVFSFDLLDSDGGEIRVICFNTVAD 343

Query: 1834 QFYGMIEAGRVYLISKGSLKPASKTFNHLNNDFCISLDIGATVQPCAEDDDSIPMQQFHF 1655
            QFY  IEAG+VYLIS+G+LKPA KTFNHL+ND  I L+  + +QPC EDDD+IP QQFHF
Sbjct: 344  QFYHQIEAGKVYLISRGNLKPAQKTFNHLHNDLEIFLESNSVIQPCFEDDDAIPRQQFHF 403

Query: 1654 RSIADIENMDNNTMLDVIGVVSSISLTVSIMKKDGTETLKRSLQLKDMSGRSVEVTLWGN 1475
            R I+++E MDNN+++D+IG+VS I+   SIM+K+GTET KR+LQLKD SGRSVE+TLWGN
Sbjct: 404  RPISEVEGMDNNSVVDIIGMVSCITPVASIMRKNGTETQKRTLQLKDNSGRSVELTLWGN 463

Query: 1474 FCNAEGQQLQSLRDSGKYPVLAVKAGRINDFNGKAVGTLSNSQLFVNPEIPEARTLREWF 1295
            FCNAEGQ+LQ++ DSG +PVLAVK+GR++DFNGKAVGT+S SQLF+ P+IPEAR L+EWF
Sbjct: 464  FCNAEGQRLQNMCDSGGFPVLAVKSGRVSDFNGKAVGTISTSQLFIEPDIPEARRLKEWF 523

Query: 1294 DTEGKDITSVSISRETVGVGRIDVRKTVSQIKDEQLGTSEKPDWITVKATINFIKVDNFC 1115
            + EG++  SVSISRE   VGR ++ KT+SQIKDE+LGTSEKPDWIT+ AT+ +IK DNFC
Sbjct: 524  EKEGRNTPSVSISRELSSVGRSEIHKTISQIKDEKLGTSEKPDWITINATVIYIKADNFC 583

Query: 1114 YTACPLMVGERQCNKKVNNNGDGQYRCEKCDQSVAQCDYRYILQFQIKDHTGLTWVTAFQ 935
            YTACP+M G+R C+KKV NNGDG++RCEKCDQS+ +CDYRYILQ Q++DHTG+TWVTAFQ
Sbjct: 584  YTACPIMAGDRPCSKKVTNNGDGKWRCEKCDQSMDECDYRYILQLQLQDHTGITWVTAFQ 643

Query: 934  ECGEEIIGVSAKELYDLKHE--DEDSFGDAIRRVMFTDYVFKLKVKEETFSDEQRVKSTV 761
            E GEEI+G+SAK+L+ +K+E  D++SF   +R+V+F+ +V KLKVKEETFSDEQRVKSTV
Sbjct: 644  ESGEEIMGISAKDLHFMKYENQDDESFSKILRQVLFSKFVIKLKVKEETFSDEQRVKSTV 703

Query: 760  VKAEKLDVSSESRFLLDMINRLVEDHNAFLGKAANVVMESGMISTGLGVNQASMMNSTGM 581
            V+AEK++ SS+SRFLL+++ +    ++  +  A+NV           G++         +
Sbjct: 704  VRAEKVNHSSQSRFLLEIMEKYKSGNS--IPSASNVESNYPNSGANTGIDSIGSRIGGSL 761

Query: 580  RTNHVGHGS----PYNSTINAIGGTG---------VSVFCNSCGGTGHNERNCPSIIN 446
             +N VG  S     +    N +G  G          ++ C SCG T H+  NCPS IN
Sbjct: 762  NSNQVGKSSFAAREFGLQTNQVGQYGNQFSAGYPTHNLSCISCGATSHSSANCPSTIN 819