BLASTX nr result

ID: Coptis21_contig00006912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006912
         (853 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22285.3| unnamed protein product [Vitis vinifera]              197   2e-48
ref|XP_002324093.1| predicted protein [Populus trichocarpa] gi|2...   189   9e-46
gb|AFK43731.1| unknown [Lotus japonicus]                              184   2e-44
ref|XP_002305375.1| predicted protein [Populus trichocarpa] gi|1...   184   3e-44
ref|XP_003531843.1| PREDICTED: membrane-anchored ubiquitin-fold ...   183   5e-44

>emb|CBI22285.3| unnamed protein product [Vitis vinifera]
          Length = 117

 Score =  197 bits (502), Expect = 2e-48
 Identities = 93/118 (78%), Positives = 109/118 (92%)
 Frame = -2

Query: 606 MSKTQDPLDIKFRLTDGSDIGPKTFTPATSVATLKESIIAQWPKEKDNGPRTVKDIKIIS 427
           MS  QD L+IKFRLTDGSDIGPK+F+ ATSVATLKE+++AQWPKEK+NGP+TVKD+K+IS
Sbjct: 1   MSGVQDQLEIKFRLTDGSDIGPKSFSAATSVATLKENVLAQWPKEKENGPKTVKDVKLIS 60

Query: 426 AGRILENNKTLGECRSPMCDIPGTVTTMHVVVQTPSTDKGEKKTANDPKQNKCVCVIL 253
           AG+ILENN+T+GECRSP+CDIPG VTTMHVVVQ PS+DK EKK A+ PKQNKCVCVIL
Sbjct: 61  AGKILENNRTIGECRSPLCDIPGGVTTMHVVVQPPSSDK-EKKVASQPKQNKCVCVIL 117


>ref|XP_002324093.1| predicted protein [Populus trichocarpa] gi|222867095|gb|EEF04226.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  189 bits (479), Expect = 9e-46
 Identities = 91/118 (77%), Positives = 105/118 (88%)
 Frame = -2

Query: 606 MSKTQDPLDIKFRLTDGSDIGPKTFTPATSVATLKESIIAQWPKEKDNGPRTVKDIKIIS 427
           M+  QD L+IKFRLTDGSDIGPKTF  ATSVATLKE+I+AQWPKEK+NGPRT+KD+K+IS
Sbjct: 1   MAVVQDQLEIKFRLTDGSDIGPKTFPAATSVATLKENILAQWPKEKENGPRTLKDVKLIS 60

Query: 426 AGRILENNKTLGECRSPMCDIPGTVTTMHVVVQTPSTDKGEKKTANDPKQNKCVCVIL 253
           AG+ILENN+T+GECRSP+CDIPG VTTMHVVVQ  S +KG KK AN  KQ+KCVCVIL
Sbjct: 61  AGKILENNRTVGECRSPLCDIPGGVTTMHVVVQPSSVEKG-KKGANQAKQSKCVCVIL 117


>gb|AFK43731.1| unknown [Lotus japonicus]
          Length = 117

 Score =  184 bits (468), Expect = 2e-44
 Identities = 85/118 (72%), Positives = 107/118 (90%)
 Frame = -2

Query: 606 MSKTQDPLDIKFRLTDGSDIGPKTFTPATSVATLKESIIAQWPKEKDNGPRTVKDIKIIS 427
           M+ T++  +IKFRLTDGSDIGPK+F  ATS+ATLKESI+AQWPK+K+NGPRTVKD+K+IS
Sbjct: 1   MAGTEEQFEIKFRLTDGSDIGPKSFAAATSIATLKESILAQWPKDKENGPRTVKDMKLIS 60

Query: 426 AGRILENNKTLGECRSPMCDIPGTVTTMHVVVQTPSTDKGEKKTANDPKQNKCVCVIL 253
           AG+IL+NN+T+GEC+SP+CD P TVTTMHVVVQ P+T+K EKK A++ KQNKC+CVIL
Sbjct: 61  AGKILDNNRTVGECQSPLCDAPDTVTTMHVVVQPPTTEK-EKKAASETKQNKCLCVIL 117


>ref|XP_002305375.1| predicted protein [Populus trichocarpa] gi|118489660|gb|ABK96631.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222848339|gb|EEE85886.1| predicted protein [Populus
           trichocarpa]
          Length = 117

 Score =  184 bits (466), Expect = 3e-44
 Identities = 87/118 (73%), Positives = 103/118 (87%)
 Frame = -2

Query: 606 MSKTQDPLDIKFRLTDGSDIGPKTFTPATSVATLKESIIAQWPKEKDNGPRTVKDIKIIS 427
           M+  QD L+IKFRL DGSDIGPKTF  ATSVATLKE+I+A WPKEK+NGPRT+KD+K+IS
Sbjct: 1   MAGVQDQLEIKFRLADGSDIGPKTFPAATSVATLKENILAHWPKEKENGPRTLKDVKLIS 60

Query: 426 AGRILENNKTLGECRSPMCDIPGTVTTMHVVVQTPSTDKGEKKTANDPKQNKCVCVIL 253
           AG+ILENN+T+GEC+SP+CDIPG VTTMHVVV   S +K EKK AN P+Q+KCVCVIL
Sbjct: 61  AGKILENNRTVGECQSPLCDIPGGVTTMHVVVHPSSVEK-EKKAANQPRQSKCVCVIL 117


>ref|XP_003531843.1| PREDICTED: membrane-anchored ubiquitin-fold protein 2-like [Glycine
           max]
          Length = 117

 Score =  183 bits (464), Expect = 5e-44
 Identities = 84/118 (71%), Positives = 104/118 (88%)
 Frame = -2

Query: 606 MSKTQDPLDIKFRLTDGSDIGPKTFTPATSVATLKESIIAQWPKEKDNGPRTVKDIKIIS 427
           M+  QD  +IKFRLTDGSDIGPK+F  ATS+ATLKES++AQWPK+K+NGP+T+KD+K+IS
Sbjct: 1   MAGNQDQFEIKFRLTDGSDIGPKSFPAATSIATLKESVLAQWPKDKENGPKTIKDVKLIS 60

Query: 426 AGRILENNKTLGECRSPMCDIPGTVTTMHVVVQTPSTDKGEKKTANDPKQNKCVCVIL 253
           AG+ILENN+T+GEC+SP+CD P TVTTMHVVVQ P+T+K EKK AN   QNKC+CVIL
Sbjct: 61  AGKILENNRTVGECQSPLCDTPDTVTTMHVVVQHPATEK-EKKAANKATQNKCMCVIL 117


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