BLASTX nr result

ID: Coptis21_contig00006904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006904
         (1339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526979.1| protein with unknown function [Ricinus commu...   450   e-124
ref|XP_002283420.1| PREDICTED: mitochondrial substrate carrier f...   444   e-122
ref|XP_002330978.1| predicted protein [Populus trichocarpa] gi|2...   423   e-116
ref|XP_003524755.1| PREDICTED: mitochondrial carnitine/acylcarni...   407   e-111
gb|AFK33461.1| unknown [Medicago truncatula]                          403   e-110

>ref|XP_002526979.1| protein with unknown function [Ricinus communis]
            gi|223533670|gb|EEF35406.1| protein with unknown function
            [Ricinus communis]
          Length = 378

 Score =  450 bits (1158), Expect = e-124
 Identities = 234/376 (62%), Positives = 276/376 (73%), Gaps = 1/376 (0%)
 Frame = -2

Query: 1284 MNDLLNDHMFATHXXXXXXXXXXXXXLTHPLDTLKTLVQVGTVPNKKLDATKLLDRVRSL 1105
            M +LL + +FA+H             LT+PLDT K LVQVG+  NK     ++L+RVRS 
Sbjct: 1    MEELLKNRLFASHAIAAAGSVTLGTALTYPLDTFKVLVQVGSSSNKPFTLHQVLNRVRSS 60

Query: 1104 SGNSGLYSGFMSSTFGRISGVGARFGIFELLTAFYKDGREDNYVYVSXXXXXXXXXXXXX 925
            SG SGLYSGF   T GRI G+G RFGI+E+LTAF+KDGREDNYVYVS             
Sbjct: 61   SGYSGLYSGFGWLTSGRIFGLGTRFGIYEVLTAFHKDGREDNYVYVSEALMAGMAAGAME 120

Query: 924  GFVSTPFELLKLRAQVTSAS-CPSASASFRNQCTSPVTAKLLHGYSPNKMALDNTVGLLS 748
              +S+PFEL+KLRAQVTSAS  P +++   N+  SP+  KLLHGY+P+K+AL+N+  LLS
Sbjct: 121  AVISSPFELIKLRAQVTSASRLPRSTSVTGNKAVSPLIDKLLHGYTPDKIALNNSAALLS 180

Query: 747  SLPTKHPNMVGSLKEYPWMMTGSGKPPSVYEVKRTADIISLEGWRALWRGLRSGVVRDSV 568
            +L  KHPN+VG+L+EYPWMMTGSGK PSV +V++T+ IISLEGW ALWRGLRSG+VRDSV
Sbjct: 181  TLSAKHPNLVGALQEYPWMMTGSGKAPSVSDVQKTSSIISLEGWGALWRGLRSGIVRDSV 240

Query: 567  FGGIFFSSWQFLHIAMLEWKAAGMDPPPRSVEEIGMLSPWXXXXXXXXXXXXXXXXSHCF 388
            + GIFFSSWQFLH AMLEWKA GM+P PRS EEIG LSP                 SHCF
Sbjct: 241  YAGIFFSSWQFLHRAMLEWKAVGMNPLPRSDEEIGPLSPVAVSLAAGFSGSAAAAASHCF 300

Query: 387  DTAKSRSQCIVLPKYISMERRLLKWKQPGYWVERVSGIHPKDRNILFRGIGLRMARSGLA 208
            DTAKSRSQC VLP YISMERRLLKW +PG   ER++GIHP DRNILFRGI LRMARSGLA
Sbjct: 301  DTAKSRSQCTVLPTYISMERRLLKWNRPGKRFERLTGIHPADRNILFRGIWLRMARSGLA 360

Query: 207  SFAIVGSYYMAVGHLI 160
            S  IVGSYY+AV HL+
Sbjct: 361  SVMIVGSYYLAVDHLV 376


>ref|XP_002283420.1| PREDICTED: mitochondrial substrate carrier family protein W [Vitis
            vinifera] gi|302143540|emb|CBI22101.3| unnamed protein
            product [Vitis vinifera]
          Length = 377

 Score =  444 bits (1143), Expect = e-122
 Identities = 224/375 (59%), Positives = 274/375 (73%), Gaps = 1/375 (0%)
 Frame = -2

Query: 1284 MNDLLNDHMFATHXXXXXXXXXXXXXLTHPLDTLKTLVQVGTVPNKKLDATKLLDRVRSL 1105
            M++LL +++ A H             LT+PLDTLKTLVQVG+   K+L   ++LDRVR L
Sbjct: 1    MDELLKNNVLAAHAIVGAGSVTLASLLTYPLDTLKTLVQVGSGSGKQLGTAQILDRVRIL 60

Query: 1104 SGNSGLYSGFMSSTFGRISGVGARFGIFELLTAFYKDGREDNYVYVSXXXXXXXXXXXXX 925
            SG SGLY+GF  ST  RISG+GARFG++E+LTAF+KDGREDNYV V              
Sbjct: 61   SGTSGLYNGFGWSTLMRISGLGARFGVYEILTAFHKDGREDNYVSVPEAFTSGMVAGAME 120

Query: 924  GFVSTPFELLKLRAQVTSASC-PSASASFRNQCTSPVTAKLLHGYSPNKMALDNTVGLLS 748
              +S+PFE++K+R QVTSAS  PS+ +        P  A+LLHGY+P++ AL+++VGLLS
Sbjct: 121  SLISSPFEIIKVRKQVTSASLIPSSRSVAEKSAVVPSIARLLHGYTPDQKALNHSVGLLS 180

Query: 747  SLPTKHPNMVGSLKEYPWMMTGSGKPPSVYEVKRTADIISLEGWRALWRGLRSGVVRDSV 568
            +L +KHPNM+G+L+EYPWMMTGSG+PP V+ V+R  D+ISLEGW ALWRGLRSGVVRD++
Sbjct: 181  TLTSKHPNMIGALQEYPWMMTGSGRPPPVFHVRRPLDVISLEGWGALWRGLRSGVVRDTI 240

Query: 567  FGGIFFSSWQFLHIAMLEWKAAGMDPPPRSVEEIGMLSPWXXXXXXXXXXXXXXXXSHCF 388
            FGG+FFS WQFLH AML+WKAAGMDP PRS +EIG LSP                 SH F
Sbjct: 241  FGGVFFSLWQFLHRAMLDWKAAGMDPSPRSDDEIGPLSPLAVSLAAGFSGSVAAAASHSF 300

Query: 387  DTAKSRSQCIVLPKYISMERRLLKWKQPGYWVERVSGIHPKDRNILFRGIGLRMARSGLA 208
            DTAKSRSQCIVLPKYIS ERRLLKWKQPG W ER +GIHP DR++L RGI LRM RSG A
Sbjct: 301  DTAKSRSQCIVLPKYISTERRLLKWKQPGRWYERYTGIHPSDRSLLHRGIWLRMGRSGFA 360

Query: 207  SFAIVGSYYMAVGHL 163
            SF +VGSY++AV  L
Sbjct: 361  SFLVVGSYFLAVDQL 375


>ref|XP_002330978.1| predicted protein [Populus trichocarpa] gi|222872770|gb|EEF09901.1|
            predicted protein [Populus trichocarpa]
          Length = 376

 Score =  423 bits (1087), Expect = e-116
 Identities = 214/376 (56%), Positives = 266/376 (70%), Gaps = 1/376 (0%)
 Frame = -2

Query: 1284 MNDLLNDHMFATHXXXXXXXXXXXXXLTHPLDTLKTLVQVGTVPNKKLDATKLLDRVRSL 1105
            M + L + +F +H             +T+PLDT+K L+QVG+   K+L + + L+RVRSL
Sbjct: 1    MGEWLKNQLFVSHAIAAVGSVTVATAVTYPLDTIKVLIQVGSNSGKQLTSLQALNRVRSL 60

Query: 1104 SGNSGLYSGFMSSTFGRISGVGARFGIFELLTAFYKDGREDNYVYVSXXXXXXXXXXXXX 925
            SGNSGLYSGF   T G+  G+GARFG +E+LTA+ KDGRE +YVYVS             
Sbjct: 61   SGNSGLYSGFGWLTVGKTLGLGARFGAYEILTAYCKDGREYSYVYVSEALMAGMVAGALE 120

Query: 924  GFVSTPFELLKLRAQVTSAS-CPSASASFRNQCTSPVTAKLLHGYSPNKMALDNTVGLLS 748
              V +PFEL+KLRAQVTSAS  P ++    N+  +P+ AKLL G++P+K AL++ V LLS
Sbjct: 121  SLVCSPFELIKLRAQVTSASRVPRSTPVTENRAVAPIIAKLLPGHTPDKKALNHFVTLLS 180

Query: 747  SLPTKHPNMVGSLKEYPWMMTGSGKPPSVYEVKRTADIISLEGWRALWRGLRSGVVRDSV 568
            +L +KHPN+ G+L EYPWMMTGSGK PSV +V++ + IISLEGW ALWRG+RSG+VRDS+
Sbjct: 181  TLTSKHPNLAGALLEYPWMMTGSGKAPSVCDVRKPSSIISLEGWGALWRGIRSGLVRDSI 240

Query: 567  FGGIFFSSWQFLHIAMLEWKAAGMDPPPRSVEEIGMLSPWXXXXXXXXXXXXXXXXSHCF 388
            FGG+FFS WQF+H  ML WKA GMDP PRS EE+G LSP                 SHCF
Sbjct: 241  FGGVFFSGWQFMHDVMLNWKAVGMDPIPRSNEEVGSLSPLSVSLAAGFSGSIAAAASHCF 300

Query: 387  DTAKSRSQCIVLPKYISMERRLLKWKQPGYWVERVSGIHPKDRNILFRGIGLRMARSGLA 208
            DTAK RSQC VLPKYISMER LL+W +PG   ER +GIHP DRNILFRG+GLRMARSG A
Sbjct: 301  DTAKCRSQCTVLPKYISMERNLLRWTRPGNRFERYTGIHPADRNILFRGLGLRMARSGFA 360

Query: 207  SFAIVGSYYMAVGHLI 160
            SF IVGSYY+ V +L+
Sbjct: 361  SFMIVGSYYLTVNYLV 376


>ref|XP_003524755.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier protein
            CACL-like [Glycine max]
          Length = 380

 Score =  407 bits (1046), Expect = e-111
 Identities = 204/375 (54%), Positives = 257/375 (68%), Gaps = 1/375 (0%)
 Frame = -2

Query: 1284 MNDLLNDHMFATHXXXXXXXXXXXXXLTHPLDTLKTLVQVGTVPNKKLDATKLLDRVRSL 1105
            MN+L        H              T+PLDT+K L+QVG+   K+LD T +L R+ S+
Sbjct: 1    MNELSQKQTLVVHGIAGAGSVALATAFTYPLDTMKVLIQVGSSTGKELDHTHVLTRLLSV 60

Query: 1104 SGNSGLYSGFMSSTFGRISGVGARFGIFELLTAFYKDGREDNYVYVSXXXXXXXXXXXXX 925
            SGN+GL++GF     GRI G+GARFG++E+L+AFYKDGRE+NY++ S             
Sbjct: 61   SGNAGLFNGFGWLLVGRIFGLGARFGVYEILSAFYKDGRENNYLFASEALLAGVVAGAIE 120

Query: 924  GFVSTPFELLKLRAQVTSAS-CPSASASFRNQCTSPVTAKLLHGYSPNKMALDNTVGLLS 748
              +S+PFEL+KLR QV+SAS  PS++ +      +P+ A+LLHG  P++ ALD  +GL+S
Sbjct: 121  AVISSPFELIKLRMQVSSASYVPSSNFALEKGARTPLIARLLHGCYPDRRALDQYIGLIS 180

Query: 747  SLPTKHPNMVGSLKEYPWMMTGSGKPPSVYEVKRTADIISLEGWRALWRGLRSGVVRDSV 568
            +L  K+ N+  +L EYPW MTGSG PPSV  V+R +DIISLEGW  LWRGLRSG+VRDSV
Sbjct: 181  TLKAKNTNLTSALLEYPWTMTGSGSPPSVSNVRRPSDIISLEGWSTLWRGLRSGIVRDSV 240

Query: 567  FGGIFFSSWQFLHIAMLEWKAAGMDPPPRSVEEIGMLSPWXXXXXXXXXXXXXXXXSHCF 388
            FGG+FFS+WQFLH AML+WKAAGM+PPPR  EE+G LSP                 SH F
Sbjct: 241  FGGVFFSTWQFLHQAMLDWKAAGMNPPPRLNEEVGPLSPLTVSLTAGFSASVAAAASHSF 300

Query: 387  DTAKSRSQCIVLPKYISMERRLLKWKQPGYWVERVSGIHPKDRNILFRGIGLRMARSGLA 208
            DT +SRSQC VLPKYISMER++LKWK+PG   ER++GIHP DR +LFRGIG RMARSGLA
Sbjct: 301  DTTRSRSQCTVLPKYISMERKILKWKRPGNKFERITGIHPSDRGVLFRGIGWRMARSGLA 360

Query: 207  SFAIVGSYYMAVGHL 163
            SF IVGSY      L
Sbjct: 361  SFIIVGSYLFVADQL 375


>gb|AFK33461.1| unknown [Medicago truncatula]
          Length = 381

 Score =  403 bits (1035), Expect = e-110
 Identities = 204/373 (54%), Positives = 260/373 (69%), Gaps = 1/373 (0%)
 Frame = -2

Query: 1278 DLLNDHMFATHXXXXXXXXXXXXXLTHPLDTLKTLVQVGTVPNKKLDATKLLDRVRSLSG 1099
            +L  + +FA H              T+PLDT+K L QVG+   K+L+A +++ RV ++SG
Sbjct: 4    ELSKNQIFALHGITAAGSIALVTTFTYPLDTIKVLTQVGSSAGKELNANQIVTRVFAVSG 63

Query: 1098 NSGLYSGFMSSTFGRISGVGARFGIFELLTAFYKDGREDNYVYVSXXXXXXXXXXXXXGF 919
            N+G++SGF    FGRI G+GARFG++E+LTAF KDGRE+NYV  S              F
Sbjct: 64   NAGMFSGFGWLAFGRIFGLGARFGVYEILTAFCKDGRENNYVTASEAFLVGMAAGATETF 123

Query: 918  VSTPFELLKLRAQVTSAS-CPSASASFRNQCTSPVTAKLLHGYSPNKMALDNTVGLLSSL 742
            +S+PFEL+KLR Q  SAS  P+++ S       P+ A+LL+G  P+K +L+  VGLLS+L
Sbjct: 124  ISSPFELIKLRMQAASASFVPNSNFSLEEGARKPLIARLLNGCYPDKKSLNQYVGLLSTL 183

Query: 741  PTKHPNMVGSLKEYPWMMTGSGKPPSVYEVKRTADIISLEGWRALWRGLRSGVVRDSVFG 562
             TK+ N+ G+L EYPW MTGSG PPSV  V+R ++IISLEGW  LWRGLRSG+VRDSVFG
Sbjct: 184  TTKNTNISGALLEYPWAMTGSGLPPSVCNVRRPSNIISLEGWSTLWRGLRSGIVRDSVFG 243

Query: 561  GIFFSSWQFLHIAMLEWKAAGMDPPPRSVEEIGMLSPWXXXXXXXXXXXXXXXXSHCFDT 382
            G+FFSSWQFLH AML+WKA GM+PPPR  +E+G LSP                 SH FDT
Sbjct: 244  GVFFSSWQFLHQAMLDWKAVGMNPPPRLNDEVGPLSPLAVSLAAGFSGSVAAAASHGFDT 303

Query: 381  AKSRSQCIVLPKYISMERRLLKWKQPGYWVERVSGIHPKDRNILFRGIGLRMARSGLASF 202
            A+SRSQC V+PKY+SMER+LL+WK+PG   ER +GIHP DRN+L RG+GLRMARSG+ASF
Sbjct: 304  ARSRSQCTVVPKYVSMERKLLQWKRPGNKFERFTGIHPSDRNVLSRGLGLRMARSGIASF 363

Query: 201  AIVGSYYMAVGHL 163
             IVGSY   V HL
Sbjct: 364  MIVGSYLFVVDHL 376


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