BLASTX nr result

ID: Coptis21_contig00006886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006886
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235799.1| uncharacterized protein LOC100500283 [Glycin...   174   1e-46
gb|AFK34981.1| unknown [Lotus japonicus] gi|388502206|gb|AFK3916...   172   2e-46
ref|NP_001236331.1| uncharacterized protein LOC100305505 [Glycin...   172   3e-46
ref|NP_001233825.1| CONSTANS interacting protein 3 [Solanum lyco...   166   3e-46
ref|XP_002522624.1| immunophilin, putative [Ricinus communis] gi...   170   5e-46

>ref|NP_001235799.1| uncharacterized protein LOC100500283 [Glycine max]
           gi|255629932|gb|ACU15318.1| unknown [Glycine max]
          Length = 112

 Score =  174 bits (440), Expect(2) = 1e-46
 Identities = 77/88 (87%), Positives = 83/88 (94%)
 Frame = -1

Query: 564 MGIEKQLLKAGNGPKPVPGQSVTVHCTGFGKNNDLGQKFWSTKDPGQEPFTFKIGQGQVI 385
           MG+EKQLL++G GPKP+PGQ+VTVHCTGFGKN DL QKFWSTKDPGQ PFTFKIGQG VI
Sbjct: 1   MGVEKQLLRSGTGPKPIPGQNVTVHCTGFGKNGDLSQKFWSTKDPGQNPFTFKIGQGSVI 60

Query: 384 KGWDEGVLGMQIGEVARLQCSPDYAYGA 301
           KGWDEGVLGMQIGEVARL+CSPDYAYGA
Sbjct: 61  KGWDEGVLGMQIGEVARLRCSPDYAYGA 88



 Score = 39.7 bits (91), Expect(2) = 1e-46
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = -2

Query: 212 FAAWGIQPNSVLVFEIEVLGAQ 147
           F AWGI+PNSVL FEIEVL AQ
Sbjct: 91  FPAWGIRPNSVLEFEIEVLSAQ 112


>gb|AFK34981.1| unknown [Lotus japonicus] gi|388502206|gb|AFK39169.1| unknown
           [Lotus japonicus] gi|388509866|gb|AFK42999.1| unknown
           [Lotus japonicus]
          Length = 112

 Score =  172 bits (435), Expect(2) = 2e-46
 Identities = 76/88 (86%), Positives = 83/88 (94%)
 Frame = -1

Query: 564 MGIEKQLLKAGNGPKPVPGQSVTVHCTGFGKNNDLGQKFWSTKDPGQEPFTFKIGQGQVI 385
           MG+EKQLL+ G GPKPVPGQ+VTVHCTGFGKN DL Q+FWSTKDPGQ+PFTFKIGQG VI
Sbjct: 1   MGVEKQLLRPGTGPKPVPGQNVTVHCTGFGKNGDLSQQFWSTKDPGQKPFTFKIGQGSVI 60

Query: 384 KGWDEGVLGMQIGEVARLQCSPDYAYGA 301
           KGWDEGVLGMQ+GEVARL+CSPDYAYGA
Sbjct: 61  KGWDEGVLGMQVGEVARLRCSPDYAYGA 88



 Score = 40.8 bits (94), Expect(2) = 2e-46
 Identities = 19/22 (86%), Positives = 19/22 (86%)
 Frame = -2

Query: 212 FAAWGIQPNSVLVFEIEVLGAQ 147
           F AWGIQPNSVL FEIEVL AQ
Sbjct: 91  FPAWGIQPNSVLDFEIEVLNAQ 112


>ref|NP_001236331.1| uncharacterized protein LOC100305505 [Glycine max]
           gi|255625723|gb|ACU13206.1| unknown [Glycine max]
          Length = 112

 Score =  172 bits (435), Expect(2) = 3e-46
 Identities = 76/88 (86%), Positives = 82/88 (93%)
 Frame = -1

Query: 564 MGIEKQLLKAGNGPKPVPGQSVTVHCTGFGKNNDLGQKFWSTKDPGQEPFTFKIGQGQVI 385
           MG+EKQLL+ G GPKP+PGQ+VTVHC GFGKN DL QKFWSTKDPGQ+PFTFKIGQG VI
Sbjct: 1   MGVEKQLLRPGTGPKPIPGQNVTVHCAGFGKNGDLSQKFWSTKDPGQDPFTFKIGQGSVI 60

Query: 384 KGWDEGVLGMQIGEVARLQCSPDYAYGA 301
           KGWDEGVLGMQIGEVARL+CSPDYAYGA
Sbjct: 61  KGWDEGVLGMQIGEVARLRCSPDYAYGA 88



 Score = 40.0 bits (92), Expect(2) = 3e-46
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = -2

Query: 212 FAAWGIQPNSVLVFEIEVLGAQ 147
           F +WGIQPNSVL FEIEVL AQ
Sbjct: 91  FPSWGIQPNSVLEFEIEVLSAQ 112


>ref|NP_001233825.1| CONSTANS interacting protein 3 [Solanum lycopersicum]
           gi|45544871|gb|AAS67371.1| CONSTANS interacting protein
           3 [Solanum lycopersicum]
          Length = 112

 Score =  166 bits (420), Expect(2) = 3e-46
 Identities = 71/88 (80%), Positives = 84/88 (95%)
 Frame = -1

Query: 564 MGIEKQLLKAGNGPKPVPGQSVTVHCTGFGKNNDLGQKFWSTKDPGQEPFTFKIGQGQVI 385
           MG+EK++++AGNGPKP PGQ+VTVHCTG+GK+ DL QKFWSTKDPGQ+PF+FKIGQG+VI
Sbjct: 1   MGVEKEVIRAGNGPKPQPGQTVTVHCTGYGKDRDLSQKFWSTKDPGQQPFSFKIGQGKVI 60

Query: 384 KGWDEGVLGMQIGEVARLQCSPDYAYGA 301
           KGWDEGVLGMQ+GEVARL C+PDYAYGA
Sbjct: 61  KGWDEGVLGMQLGEVARLTCTPDYAYGA 88



 Score = 45.8 bits (107), Expect(2) = 3e-46
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = -2

Query: 212 FAAWGIQPNSVLVFEIEVLGAQ 147
           F AWGIQPNSVLVFEIEVLGAQ
Sbjct: 91  FPAWGIQPNSVLVFEIEVLGAQ 112


>ref|XP_002522624.1| immunophilin, putative [Ricinus communis]
           gi|223538100|gb|EEF39711.1| immunophilin, putative
           [Ricinus communis]
          Length = 112

 Score =  170 bits (430), Expect(2) = 5e-46
 Identities = 75/88 (85%), Positives = 82/88 (93%)
 Frame = -1

Query: 564 MGIEKQLLKAGNGPKPVPGQSVTVHCTGFGKNNDLGQKFWSTKDPGQEPFTFKIGQGQVI 385
           MG+EKQL++ GNGPKP  GQ+VTVHCTGFGKN DL QKFWSTKDPGQ+PFTFKIGQG VI
Sbjct: 1   MGVEKQLIRPGNGPKPAAGQTVTVHCTGFGKNGDLSQKFWSTKDPGQKPFTFKIGQGNVI 60

Query: 384 KGWDEGVLGMQIGEVARLQCSPDYAYGA 301
           KGWDEGV+GMQIGEVARL+CSPDYAYGA
Sbjct: 61  KGWDEGVMGMQIGEVARLRCSPDYAYGA 88



 Score = 41.2 bits (95), Expect(2) = 5e-46
 Identities = 19/22 (86%), Positives = 19/22 (86%)
 Frame = -2

Query: 212 FAAWGIQPNSVLVFEIEVLGAQ 147
           F AWGIQPNSVL FEIEVLG Q
Sbjct: 91  FPAWGIQPNSVLDFEIEVLGLQ 112


Top