BLASTX nr result

ID: Coptis21_contig00006826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006826
         (1310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271556.1| PREDICTED: G patch domain-containing protein...   409   e-112
emb|CBI15390.3| unnamed protein product [Vitis vinifera]              406   e-111
ref|XP_002511999.1| RNA binding protein, putative [Ricinus commu...   384   e-104
ref|XP_002318558.1| predicted protein [Populus trichocarpa] gi|2...   367   3e-99
ref|XP_004138338.1| PREDICTED: G patch domain-containing protein...   361   2e-97

>ref|XP_002271556.1| PREDICTED: G patch domain-containing protein 1-like [Vitis vinifera]
          Length = 997

 Score =  409 bits (1051), Expect = e-112
 Identities = 232/437 (53%), Positives = 296/437 (67%), Gaps = 9/437 (2%)
 Frame = +2

Query: 11   LQKESVPSLQKMTAESRGRILGEKPLERSYKDSSPSIASADAVQFQFNLSDTFTKPASLN 190
            L  +S P++QKMTAESRG+ILGE+PLERS +D++ S+ASAD +Q QFNLSDTFTKPASL 
Sbjct: 467  LDVKSSPTVQKMTAESRGKILGERPLERSSRDTNSSVASADVIQLQFNLSDTFTKPASLK 526

Query: 191  DTPERVKPFKADPAKQERFEHFLKEKYQGGLRSTESGGNSKMSESARARERLDFEAAAEA 370
            +  E  KPFK DPAKQERFE FLKEKY GGLRST+SGG S MSE+ARARE+LDFEAAAE 
Sbjct: 527  ELSEIAKPFKEDPAKQERFELFLKEKYHGGLRSTDSGGASNMSEAARAREKLDFEAAAET 586

Query: 371  IEKGKQDASNVLLPNQQLAEMSASASLQFTSGGLEEANVSKVEEQIRSKMYPKRDEYQWR 550
            IEKG +   +  L  QQ  EMSA+A ++F  GGLE+A V++ EE +  KMYPKR+E+QWR
Sbjct: 587  IEKGLRGKES-NLSTQQFMEMSATAVMEFAPGGLEQAKVTQAEELVIKKMYPKREEFQWR 645

Query: 551  PSPLLCKRFDIVDPYMGKPPPLPRARSRMDSLVFTSDFVKATKSEDTVPASGNSMFVSQP 730
            PSP+LCKRFDI+DP+MGKPPP PR RS+MDSLVFTSD VK+T  ++TV    + + V+Q 
Sbjct: 646  PSPILCKRFDIIDPFMGKPPPAPRRRSKMDSLVFTSDSVKSTTVDETVT---SKLPVAQL 702

Query: 731  ETQVTADEVLNSETEIEINSTNVERPVDLYKAIFXXXXXXXXXXXXXNQMQDPEKKTEVA 910
            + Q  + +V   E E+ +    VERPVDLYKAIF             NQ+ DP++K E A
Sbjct: 703  DPQQFSTDVNAREIEVNMEVEKVERPVDLYKAIFSDDSDDEVENSTSNQVDDPKRKIEAA 762

Query: 911  NTTLNRLIAGDFLESLGKELGLEVPSEAPIVRDKV-SIASQKENNCTNTSNRS------- 1066
            NTTLNRL+AGDFLESLGKELGLEVP + P   +K  + A +KE+N  N  N S       
Sbjct: 763  NTTLNRLMAGDFLESLGKELGLEVPPDMPQSINKARTSAPKKESNDVNPGNISSLAVENK 822

Query: 1067 PQKIHIAMEISDVPSKGKEAADGCSSLPKITQKGASNGNEQDHGNRQGEP-TATGHFVHI 1243
            P   + A++ + V    +EA    +   + TQ+  S  NE    +  G     TG   + 
Sbjct: 823  PSSTYTAVKGTSV---NQEAPHDKAYDQESTQEVRSQNNELMLDSPSGSKIKVTGSSENE 879

Query: 1244 YEKAEAQKLDSEVKISK 1294
              K +A+K+D E + +K
Sbjct: 880  SSKIKAEKMDQEGRKAK 896


>emb|CBI15390.3| unnamed protein product [Vitis vinifera]
          Length = 944

 Score =  406 bits (1043), Expect = e-111
 Identities = 221/407 (54%), Positives = 283/407 (69%), Gaps = 8/407 (1%)
 Frame = +2

Query: 11   LQKESVPSLQKMTAESRGRILGEKPLERSYKDSSPSIASADAVQFQFNLSDTFTKPASLN 190
            L  +S P++QKMTAESRG+ILGE+PLERS +D++ S+ASAD +Q QFNLSDTFTKPASL 
Sbjct: 467  LDVKSSPTVQKMTAESRGKILGERPLERSSRDTNSSVASADVIQLQFNLSDTFTKPASLK 526

Query: 191  DTPERVKPFKADPAKQERFEHFLKEKYQGGLRSTESGGNSKMSESARARERLDFEAAAEA 370
            +  E  KPFK DPAKQERFE FLKEKY GGLRST+SGG S MSE+ARARE+LDFEAAAE 
Sbjct: 527  ELSEIAKPFKEDPAKQERFELFLKEKYHGGLRSTDSGGASNMSEAARAREKLDFEAAAET 586

Query: 371  IEKGKQDASNVLLPNQQLAEMSASASLQFTSGGLEEANVSKVEEQIRSKMYPKRDEYQWR 550
            IEKG +   +  L  QQ  EMSA+A ++F  GGLE+A V++ EE +  KMYPKR+E+QWR
Sbjct: 587  IEKGLRGKES-NLSTQQFMEMSATAVMEFAPGGLEQAKVTQAEELVIKKMYPKREEFQWR 645

Query: 551  PSPLLCKRFDIVDPYMGKPPPLPRARSRMDSLVFTSDFVKATKSEDTVPASGNSMFVSQP 730
            PSP+LCKRFDI+DP+MGKPPP PR RS+MDSLVFTSD VK+T  ++TV    + + V+Q 
Sbjct: 646  PSPILCKRFDIIDPFMGKPPPAPRRRSKMDSLVFTSDSVKSTTVDETVT---SKLPVAQL 702

Query: 731  ETQVTADEVLNSETEIEINSTNVERPVDLYKAIFXXXXXXXXXXXXXNQMQDPEKKTEVA 910
            + Q  + +V   E E+ +    VERPVDLYKAIF             NQ+ DP++K E A
Sbjct: 703  DPQQFSTDVNAREIEVNMEVEKVERPVDLYKAIFSDDSDDEVENSTSNQVDDPKRKIEAA 762

Query: 911  NTTLNRLIAGDFLESLGKELGLEVPSEAPIVRDKV-SIASQKENNCTNTSNRS------- 1066
            NTTLNRL+AGDFLESLGKELGLEVP + P   +K  + A +KE+N  N  N S       
Sbjct: 763  NTTLNRLMAGDFLESLGKELGLEVPPDMPQSINKARTSAPKKESNDVNPGNISSLAVENK 822

Query: 1067 PQKIHIAMEISDVPSKGKEAADGCSSLPKITQKGASNGNEQDHGNRQ 1207
            P   + A++   +  +G++A           Q  +S+ + +D  +R+
Sbjct: 823  PSSTYTAVKAEKMDQEGRKAKTPTGH----RQNWSSDSSSEDERSRK 865


>ref|XP_002511999.1| RNA binding protein, putative [Ricinus communis]
            gi|223549179|gb|EEF50668.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 1000

 Score =  384 bits (986), Expect = e-104
 Identities = 200/345 (57%), Positives = 248/345 (71%)
 Frame = +2

Query: 8    SLQKESVPSLQKMTAESRGRILGEKPLERSYKDSSPSIASADAVQFQFNLSDTFTKPASL 187
            +L  +S  S+Q+MTAESR  +LGEKPLERS K+++ S+ASAD    QFNLSDTF KPAS 
Sbjct: 470  ALDGKSSSSVQRMTAESRANLLGEKPLERSLKENTSSVASAD-FNLQFNLSDTFIKPASY 528

Query: 188  NDTPERVKPFKADPAKQERFEHFLKEKYQGGLRSTESGGNSKMSESARARERLDFEAAAE 367
            ++ PE  KPFK DPAKQERFE FLKEKY GGLRS +S G S MSE+ARARERLDFEAAAE
Sbjct: 529  SELPEVAKPFKDDPAKQERFEQFLKEKYYGGLRSMDSVGASNMSEAARARERLDFEAAAE 588

Query: 368  AIEKGKQDASNVLLPNQQLAEMSASASLQFTSGGLEEANVSKVEEQIRSKMYPKRDEYQW 547
            AIEKGK +     L  QQ    S     QFTSGGLE+   +  E+ +  K+YPKR+E+QW
Sbjct: 589  AIEKGKGN-KETKLSAQQFMAFSTGGGTQFTSGGLEQVKDAHAEDLLMKKIYPKREEFQW 647

Query: 548  RPSPLLCKRFDIVDPYMGKPPPLPRARSRMDSLVFTSDFVKATKSEDTVPASGNSMFVSQ 727
            RP P+LCKRFD++DPYMGKPPP PR RS++DSL+FTSD VK TK E+T  A+ + +   Q
Sbjct: 648  RPLPILCKRFDLIDPYMGKPPPPPRMRSKLDSLIFTSDSVKPTKLEETTNANRDRISNLQ 707

Query: 728  PETQVTADEVLNSETEIEINSTNVERPVDLYKAIFXXXXXXXXXXXXXNQMQDPEKKTEV 907
              TQ  + +  +SE  +E+   NVERPVDLYKAIF             N+++DP+KK EV
Sbjct: 708  SGTQKISKDAADSEKVVEVQVENVERPVDLYKAIFSDDSDDEVEASTANKVEDPDKKVEV 767

Query: 908  ANTTLNRLIAGDFLESLGKELGLEVPSEAPIVRDKVSIASQKENN 1042
            A+TTLNRLIAGDFLESLGKELGLEVP + P   +K   ++ K+++
Sbjct: 768  AHTTLNRLIAGDFLESLGKELGLEVPPDMPYSTNKTGTSTSKKDS 812


>ref|XP_002318558.1| predicted protein [Populus trichocarpa] gi|222859231|gb|EEE96778.1|
            predicted protein [Populus trichocarpa]
          Length = 965

 Score =  367 bits (943), Expect = 3e-99
 Identities = 205/386 (53%), Positives = 253/386 (65%)
 Frame = +2

Query: 32   SLQKMTAESRGRILGEKPLERSYKDSSPSIASADAVQFQFNLSDTFTKPASLNDTPERVK 211
            S+ KMT ESRG+ILGE PLERS +D S SIAS + V   FNLSDTFTKP S ++ PE  K
Sbjct: 482  SVDKMTVESRGKILGEMPLERSSRDLSSSIASVN-VNLPFNLSDTFTKPESSSEFPEVAK 540

Query: 212  PFKADPAKQERFEHFLKEKYQGGLRSTESGGNSKMSESARARERLDFEAAAEAIEKGKQD 391
            PF+ DP KQERFE FLKEKYQGG+RST S G S MSE+ARARERLDFEAAAEAIEKGK +
Sbjct: 541  PFQDDPGKQERFEQFLKEKYQGGIRSTASAGASNMSEAARARERLDFEAAAEAIEKGKLN 600

Query: 392  ASNVLLPNQQLAEMSASASLQFTSGGLEEANVSKVEEQIRSKMYPKRDEYQWRPSPLLCK 571
              N L  +QQL    AS  +QFT GGL++   +  E+    K+YP+R+E+QWRPS +LCK
Sbjct: 601  KENKL--SQQLMAFPASGGMQFTLGGLQQGKDTPDEDLATKKIYPRREEFQWRPSSVLCK 658

Query: 572  RFDIVDPYMGKPPPLPRARSRMDSLVFTSDFVKATKSEDTVPASGNSMFVSQPETQVTAD 751
            RFD++DP MGKPPP PR RS+MDSL+ TSD +KA K E+   A  N     Q   Q  + 
Sbjct: 659  RFDLIDPSMGKPPPPPRMRSKMDSLIVTSD-LKAMKMEEAFSADRNQPLALQFSPQEVSK 717

Query: 752  EVLNSETEIEINSTNVERPVDLYKAIFXXXXXXXXXXXXXNQMQDPEKKTEVANTTLNRL 931
            +V++ ETE E+   NVERPVDLYKAIF             N  +DPEKK EVA++TLNRL
Sbjct: 718  DVVDRETEPEVQVENVERPVDLYKAIFSDDSDDEMEASNFNAKEDPEKKIEVAHSTLNRL 777

Query: 932  IAGDFLESLGKELGLEVPSEAPIVRDKVSIASQKENNCTNTSNRSPQKIHIAMEISDVPS 1111
            +AGDFLESLG+ELGLEVP   P   +    + QKE+   N  N +   +      S   +
Sbjct: 778  MAGDFLESLGRELGLEVPPNPPYSTNIARSSHQKESAIANAGNDNIPSVE-EKSFSIPIA 836

Query: 1112 KGKEAADGCSSLPKITQKGASNGNEQ 1189
             G    +  ++  K  +KG S  +EQ
Sbjct: 837  HGVSQEERVANDEKTAKKGESRKDEQ 862


>ref|XP_004138338.1| PREDICTED: G patch domain-containing protein 1-like [Cucumis sativus]
          Length = 1001

 Score =  361 bits (927), Expect = 2e-97
 Identities = 196/345 (56%), Positives = 240/345 (69%), Gaps = 1/345 (0%)
 Frame = +2

Query: 5    PSLQKESVPSLQKMTAESRGRILGEKPLERSYKDSSPSIASADAVQFQFNLSDTFTKPAS 184
            P    +  PSL+KMTAESRG+ILGEKPL RS K+ +P  AS D V  Q+NLSDTFTKP S
Sbjct: 471  PQFDDKLSPSLKKMTAESRGKILGEKPLARSAKELNPPAAS-DGVHVQYNLSDTFTKPTS 529

Query: 185  LNDTPERVKPFKADPAKQERFEHFLKEKYQGGLRSTESGGNSKMSESARARERLDFEAAA 364
                PE VKPFK D AKQERFE FLKEKYQGGLR+    G   MSE+ARARERLDFEAAA
Sbjct: 530  SGGMPEIVKPFKDDSAKQERFEQFLKEKYQGGLRTGAPVGAINMSEAARARERLDFEAAA 589

Query: 365  EAIEKGKQDASNVLLPNQQLAEMSASASLQFTSGGLEEANVSKVEEQIRSKMYPKRDEYQ 544
            EAIEKGK       L  +   +  A+  +QFTSGG+EE   +K+E  +  KM PKR+EYQ
Sbjct: 590  EAIEKGK-GLKETKLSAEHFVDFLATGGMQFTSGGVEEVKDTKLEGLMMEKMIPKREEYQ 648

Query: 545  WRPSPLLCKRFDIVDPYMGKPPPLPRARSRMDSLVFTSDFVKATKSEDTVPASGNSMFVS 724
            WRP+P+LCKRFD++DPYMGKPPP PR RS++D+L+FTS+ VK+TK E+++ ++ +S   S
Sbjct: 649  WRPAPILCKRFDLIDPYMGKPPPAPRMRSKLDTLIFTSNSVKSTKVEESLTSTPSSFPQS 708

Query: 725  QPETQ-VTADEVLNSETEIEINSTNVERPVDLYKAIFXXXXXXXXXXXXXNQMQDPEKKT 901
              E + + A E +N + E+E     V+RPVDLYKAIF              Q +D +KK 
Sbjct: 709  NAEEKDMDASENVNEKVEVEC----VDRPVDLYKAIFSDESEDEESTSTLKQTEDSKKKV 764

Query: 902  EVANTTLNRLIAGDFLESLGKELGLEVPSEAPIVRDKVSIASQKE 1036
            EVANTTLNRLIAGDFLESLGKELGLEVP + P  +   + A Q E
Sbjct: 765  EVANTTLNRLIAGDFLESLGKELGLEVPPDLPPSKKGQTTAPQNE 809


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