BLASTX nr result

ID: Coptis21_contig00006824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006824
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235335.1| uncharacterized protein LOC100526873 [Glycin...   169   2e-40
ref|XP_004141861.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   168   5e-40
ref|XP_004141860.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   168   5e-40
dbj|BAK01929.1| predicted protein [Hordeum vulgare subsp. vulgare]    167   6e-40
ref|XP_002265704.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   167   6e-40

>ref|NP_001235335.1| uncharacterized protein LOC100526873 [Glycine max]
           gi|255631034|gb|ACU15881.1| unknown [Glycine max]
          Length = 146

 Score =  169 bits (428), Expect = 2e-40
 Identities = 77/91 (84%), Positives = 85/91 (93%)
 Frame = +2

Query: 185 EYSRGEIGCVSGIPDEHLRRKVVIFSPARTASQQGSGKLGKWKINFMSTQKWENPLMGWT 364
           E  RGEIG VSGIP EHLRR+VVI+SPARTASQQGSGK+GKWKINF+STQKWENPLMGWT
Sbjct: 24  EIKRGEIGMVSGIPQEHLRRRVVIYSPARTASQQGSGKVGKWKINFLSTQKWENPLMGWT 83

Query: 365 STGDPYANVGDSALDFDSEESAKAFADNHGW 457
           STGDPY++VGDSAL FDSEE+AKAFA+ HGW
Sbjct: 84  STGDPYSHVGDSALTFDSEEAAKAFAEKHGW 114


>ref|XP_004141861.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4,
           mitochondrial-like isoform 2 [Cucumis sativus]
          Length = 137

 Score =  168 bits (425), Expect = 5e-40
 Identities = 77/91 (84%), Positives = 84/91 (92%)
 Frame = +2

Query: 185 EYSRGEIGCVSGIPDEHLRRKVVIFSPARTASQQGSGKLGKWKINFMSTQKWENPLMGWT 364
           E   GEIG VSGIP+EHL R+VVI+SPARTASQQGSGK+GKWKINF+STQKWENPLMGWT
Sbjct: 33  EMKPGEIGVVSGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFVSTQKWENPLMGWT 92

Query: 365 STGDPYANVGDSALDFDSEESAKAFADNHGW 457
           STGDPYANVGDSAL FDSEE+AKAFA+ HGW
Sbjct: 93  STGDPYANVGDSALSFDSEEAAKAFAEKHGW 123


>ref|XP_004141860.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4,
           mitochondrial-like isoform 1 [Cucumis sativus]
           gi|449499860|ref|XP_004160936.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 4,
           mitochondrial-like [Cucumis sativus]
          Length = 156

 Score =  168 bits (425), Expect = 5e-40
 Identities = 77/91 (84%), Positives = 84/91 (92%)
 Frame = +2

Query: 185 EYSRGEIGCVSGIPDEHLRRKVVIFSPARTASQQGSGKLGKWKINFMSTQKWENPLMGWT 364
           E   GEIG VSGIP+EHL R+VVI+SPARTASQQGSGK+GKWKINF+STQKWENPLMGWT
Sbjct: 33  EMKPGEIGVVSGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFVSTQKWENPLMGWT 92

Query: 365 STGDPYANVGDSALDFDSEESAKAFADNHGW 457
           STGDPYANVGDSAL FDSEE+AKAFA+ HGW
Sbjct: 93  STGDPYANVGDSALSFDSEEAAKAFAEKHGW 123


>dbj|BAK01929.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 158

 Score =  167 bits (424), Expect = 6e-40
 Identities = 76/91 (83%), Positives = 84/91 (92%)
 Frame = +2

Query: 185 EYSRGEIGCVSGIPDEHLRRKVVIFSPARTASQQGSGKLGKWKINFMSTQKWENPLMGWT 364
           E  RGEIG VSGIP+EHLRRKV+I+SPARTASQQGSGK+G+WKINF+STQKWENPLMGWT
Sbjct: 35  EIKRGEIGMVSGIPEEHLRRKVLIYSPARTASQQGSGKVGRWKINFVSTQKWENPLMGWT 94

Query: 365 STGDPYANVGDSALDFDSEESAKAFADNHGW 457
           STGDPYANVG++ L FDS ESAKAFAD HGW
Sbjct: 95  STGDPYANVGEAGLTFDSAESAKAFADKHGW 125


>ref|XP_002265704.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4,
           mitochondrial [Vitis vinifera]
           gi|147858131|emb|CAN83933.1| hypothetical protein
           VITISV_035766 [Vitis vinifera]
          Length = 154

 Score =  167 bits (424), Expect = 6e-40
 Identities = 76/91 (83%), Positives = 84/91 (92%)
 Frame = +2

Query: 185 EYSRGEIGCVSGIPDEHLRRKVVIFSPARTASQQGSGKLGKWKINFMSTQKWENPLMGWT 364
           E   GEIG VSGIP+EHLRR+VVIFSPARTA+QQGSGK+G+WKINFMSTQKWENPLMGWT
Sbjct: 33  EIKPGEIGMVSGIPEEHLRRRVVIFSPARTATQQGSGKVGRWKINFMSTQKWENPLMGWT 92

Query: 365 STGDPYANVGDSALDFDSEESAKAFADNHGW 457
           STGDPYANVGD+ L FDSEE+AKAFA+ HGW
Sbjct: 93  STGDPYANVGDAGLGFDSEEAAKAFAEKHGW 123


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