BLASTX nr result

ID: Coptis21_contig00006816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006816
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330659.1| predicted protein [Populus trichocarpa] gi|2...   157   8e-37
ref|XP_002273660.1| PREDICTED: trigger factor-like [Vitis vinifera]   156   1e-36
emb|CBI24665.3| unnamed protein product [Vitis vinifera]              156   1e-36
gb|AEC10971.1| hypothetical protein [Camellia sinensis]               155   4e-36
ref|XP_002530570.1| conserved hypothetical protein [Ricinus comm...   153   2e-35

>ref|XP_002330659.1| predicted protein [Populus trichocarpa] gi|222872263|gb|EEF09394.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  157 bits (397), Expect = 8e-37
 Identities = 74/95 (77%), Positives = 88/95 (92%)
 Frame = -2

Query: 474 FEDVFSKMVAAAQPIPGFRRVKGGKTPNIPREVLLEILGPSKVYKQVIKKIISSAVAEYV 295
           FEDVF KMV AAQPIPGFRRVKGGKTP+IPR++LLE+LGPSKVYK+VIKK+I+S VAEYV
Sbjct: 15  FEDVFKKMVTAAQPIPGFRRVKGGKTPDIPRDILLEVLGPSKVYKEVIKKVINSTVAEYV 74

Query: 294 EKENLNVTKDLRVEQSFEELEASYEPGEEFSFDAI 190
           +KE L V+KDLRVEQSFE+LE ++EP E+FSFDA+
Sbjct: 75  DKEGLKVSKDLRVEQSFEDLEDAFEPDEKFSFDAV 109


>ref|XP_002273660.1| PREDICTED: trigger factor-like [Vitis vinifera]
          Length = 212

 Score =  156 bits (395), Expect = 1e-36
 Identities = 74/95 (77%), Positives = 88/95 (92%)
 Frame = -2

Query: 474 FEDVFSKMVAAAQPIPGFRRVKGGKTPNIPREVLLEILGPSKVYKQVIKKIISSAVAEYV 295
           F++VFSKMVA AQPIPGFRRVKGGKTP+IPR++LLE+LGPSKVY QVIKK+I+S VAEYV
Sbjct: 111 FDNVFSKMVADAQPIPGFRRVKGGKTPDIPRDILLEVLGPSKVYMQVIKKVINSTVAEYV 170

Query: 294 EKENLNVTKDLRVEQSFEELEASYEPGEEFSFDAI 190
           EKE + V+KDLRVEQSFE+LE ++EPGEEF FDA+
Sbjct: 171 EKEGIKVSKDLRVEQSFEDLEDAFEPGEEFRFDAV 205


>emb|CBI24665.3| unnamed protein product [Vitis vinifera]
          Length = 206

 Score =  156 bits (395), Expect = 1e-36
 Identities = 74/95 (77%), Positives = 88/95 (92%)
 Frame = -2

Query: 474 FEDVFSKMVAAAQPIPGFRRVKGGKTPNIPREVLLEILGPSKVYKQVIKKIISSAVAEYV 295
           F++VFSKMVA AQPIPGFRRVKGGKTP+IPR++LLE+LGPSKVY QVIKK+I+S VAEYV
Sbjct: 105 FDNVFSKMVADAQPIPGFRRVKGGKTPDIPRDILLEVLGPSKVYMQVIKKVINSTVAEYV 164

Query: 294 EKENLNVTKDLRVEQSFEELEASYEPGEEFSFDAI 190
           EKE + V+KDLRVEQSFE+LE ++EPGEEF FDA+
Sbjct: 165 EKEGIKVSKDLRVEQSFEDLEDAFEPGEEFRFDAV 199


>gb|AEC10971.1| hypothetical protein [Camellia sinensis]
          Length = 209

 Score =  155 bits (391), Expect = 4e-36
 Identities = 72/95 (75%), Positives = 87/95 (91%)
 Frame = -2

Query: 474 FEDVFSKMVAAAQPIPGFRRVKGGKTPNIPREVLLEILGPSKVYKQVIKKIISSAVAEYV 295
           F+DVFSKMVA AQPIPGFRR+KGGKTP+IP E+LL++LGPSKVYKQVI K+I+S +AEYV
Sbjct: 108 FDDVFSKMVADAQPIPGFRRLKGGKTPDIPTEILLQVLGPSKVYKQVITKVINSTIAEYV 167

Query: 294 EKENLNVTKDLRVEQSFEELEASYEPGEEFSFDAI 190
           EKE L V+KDLRVEQSFE+LEA +EPG++FSFD +
Sbjct: 168 EKEGLTVSKDLRVEQSFEDLEAMFEPGDQFSFDVV 202


>ref|XP_002530570.1| conserved hypothetical protein [Ricinus communis]
           gi|223529869|gb|EEF31800.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 187

 Score =  153 bits (386), Expect = 2e-35
 Identities = 71/95 (74%), Positives = 88/95 (92%)
 Frame = -2

Query: 474 FEDVFSKMVAAAQPIPGFRRVKGGKTPNIPREVLLEILGPSKVYKQVIKKIISSAVAEYV 295
           F++VF KMVAAAQPIPGFRRVKGGKTP+IPR++LLE+LGPSKVYK+VIKK+I+S VA+YV
Sbjct: 86  FDNVFEKMVAAAQPIPGFRRVKGGKTPDIPRDILLEVLGPSKVYKEVIKKVINSTVAKYV 145

Query: 294 EKENLNVTKDLRVEQSFEELEASYEPGEEFSFDAI 190
           EKE L V+KDLR+EQSFE+LE ++EP  +FSFDA+
Sbjct: 146 EKEGLKVSKDLRIEQSFEDLEETFEPDAKFSFDAV 180


Top