BLASTX nr result

ID: Coptis21_contig00006803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006803
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629967.1| Aminomethyltransferase [Medicago truncatula]...   129   2e-28
ref|XP_002269147.1| PREDICTED: aminomethyltransferase [Vitis vin...   129   2e-28
ref|XP_003525008.1| PREDICTED: aminomethyltransferase-like [Glyc...   127   7e-28
ref|XP_002886571.1| At1g60990 [Arabidopsis lyrata subsp. lyrata]...   127   9e-28
gb|AAG51655.1|AC018908_21 hypothetical protein; 60474-57856 [Ara...   125   5e-27

>ref|XP_003629967.1| Aminomethyltransferase [Medicago truncatula]
           gi|355523989|gb|AET04443.1| Aminomethyltransferase
           [Medicago truncatula]
          Length = 422

 Score =  129 bits (324), Expect = 2e-28
 Identities = 60/84 (71%), Positives = 72/84 (85%)
 Frame = +3

Query: 63  FNLAPPPIDHDLLDTMVELGAKVSEEGVVETFGNDDEAIHAAYEGVAVVDLTHFGRIRVT 242
           F+L+PPPIDHD LDT+   GA+VS EG+VETF ND+EA+ AA  GV VVDL+HFGRIRV+
Sbjct: 58  FDLSPPPIDHDFLDTVKTAGAEVSGEGIVETFHNDEEALDAADNGVVVVDLSHFGRIRVS 117

Query: 243 GEDRIQFLHNQTTANFEGLSEGQG 314
           G+DR+QFLHNQ+TANFEGL  GQG
Sbjct: 118 GDDRVQFLHNQSTANFEGLQAGQG 141


>ref|XP_002269147.1| PREDICTED: aminomethyltransferase [Vitis vinifera]
           gi|298204501|emb|CBI23776.3| unnamed protein product
           [Vitis vinifera]
          Length = 430

 Score =  129 bits (324), Expect = 2e-28
 Identities = 61/84 (72%), Positives = 72/84 (85%)
 Frame = +3

Query: 63  FNLAPPPIDHDLLDTMVELGAKVSEEGVVETFGNDDEAIHAAYEGVAVVDLTHFGRIRVT 242
           F+L+PPPID DLLDT+ E GA+VSE G++ETF NDDEA+ A   GV VVDL+HFGRIRV+
Sbjct: 66  FDLSPPPIDLDLLDTVTEAGAEVSEAGIIETFDNDDEALDAVDNGVVVVDLSHFGRIRVS 125

Query: 243 GEDRIQFLHNQTTANFEGLSEGQG 314
           G+DRIQFLHNQ+TANFE L EGQG
Sbjct: 126 GDDRIQFLHNQSTANFECLQEGQG 149


>ref|XP_003525008.1| PREDICTED: aminomethyltransferase-like [Glycine max]
          Length = 423

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/84 (70%), Positives = 70/84 (83%)
 Frame = +3

Query: 63  FNLAPPPIDHDLLDTMVELGAKVSEEGVVETFGNDDEAIHAAYEGVAVVDLTHFGRIRVT 242
           F+L+PPPIDHD LDT+   G ++S EG++ETF NDDEA+ A   GV VVDL+HFGRIRV+
Sbjct: 62  FDLSPPPIDHDFLDTVKTAGGEISGEGIIETFHNDDEALAAVDNGVVVVDLSHFGRIRVS 121

Query: 243 GEDRIQFLHNQTTANFEGLSEGQG 314
           GEDRIQFLHNQ+TANFE L EGQG
Sbjct: 122 GEDRIQFLHNQSTANFESLHEGQG 145


>ref|XP_002886571.1| At1g60990 [Arabidopsis lyrata subsp. lyrata]
           gi|297332412|gb|EFH62830.1| At1g60990 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 423

 Score =  127 bits (319), Expect = 9e-28
 Identities = 59/85 (69%), Positives = 70/85 (82%)
 Frame = +3

Query: 60  EFNLAPPPIDHDLLDTMVELGAKVSEEGVVETFGNDDEAIHAAYEGVAVVDLTHFGRIRV 239
           +F+ +PPPIDHD LDT+   G KVSE+G+VE+F NDDEA+ A   GV VVDL+HFGRIRV
Sbjct: 58  QFDFSPPPIDHDFLDTISVAGGKVSEDGIVESFDNDDEALDAFDNGVVVVDLSHFGRIRV 117

Query: 240 TGEDRIQFLHNQTTANFEGLSEGQG 314
           +G+DR  FLHNQTTANFE LSEGQG
Sbjct: 118 SGDDRAHFLHNQTTANFESLSEGQG 142


>gb|AAG51655.1|AC018908_21 hypothetical protein; 60474-57856 [Arabidopsis thaliana]
          Length = 436

 Score =  125 bits (313), Expect = 5e-27
 Identities = 59/85 (69%), Positives = 69/85 (81%)
 Frame = +3

Query: 60  EFNLAPPPIDHDLLDTMVELGAKVSEEGVVETFGNDDEAIHAAYEGVAVVDLTHFGRIRV 239
           +F+ +PPPIDHD LDT+   G KVSE+GVVE+F NDDEA+ A   GV VVDL+HFGRIRV
Sbjct: 58  QFDFSPPPIDHDFLDTISVSGGKVSEDGVVESFDNDDEALDAFDNGVVVVDLSHFGRIRV 117

Query: 240 TGEDRIQFLHNQTTANFEGLSEGQG 314
           +G+DR  FLHNQTTANFE L EGQG
Sbjct: 118 SGDDRAHFLHNQTTANFESLYEGQG 142


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