BLASTX nr result

ID: Coptis21_contig00006794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006794
         (1552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275732.1| PREDICTED: uncharacterized protein LOC100242...   296   1e-77
ref|XP_002303017.1| predicted protein [Populus trichocarpa] gi|2...   265   2e-68
ref|XP_002512833.1| conserved hypothetical protein [Ricinus comm...   259   1e-66
ref|XP_002320419.1| predicted protein [Populus trichocarpa] gi|2...   259   1e-66
ref|XP_002304642.1| predicted protein [Populus trichocarpa] gi|2...   243   8e-62

>ref|XP_002275732.1| PREDICTED: uncharacterized protein LOC100242886 [Vitis vinifera]
          Length = 442

 Score =  296 bits (757), Expect = 1e-77
 Identities = 163/315 (51%), Positives = 206/315 (65%), Gaps = 11/315 (3%)
 Frame = +1

Query: 229  IRSSIGLDRTLDNEEEEDEYDKVALGRENTGDRLYMKDITDYGEYLNSYNVLPDSFKDRE 408
            IRSSIGLD  LDNEEEEDEYDKVA+GRE  G+RLYM D  DY   L+S NV+P+SFKD  
Sbjct: 119  IRSSIGLDCALDNEEEEDEYDKVAVGREKAGERLYMTDFNDYAIELDSCNVIPESFKDVA 178

Query: 409  RDSRANLLAAKIRLKEDEEASG-VDTFADVGQEMPGFVDSPV--TEDGGNLKSILKRKET 579
            RD RAN +AAKIRL+ED EA+G  D+     + +P    + +  +EDG NLKSILKRKE 
Sbjct: 179  RDPRANHMAAKIRLQEDAEAAGSFDSLRVSDKTLPAAAATQINTSEDGANLKSILKRKEN 238

Query: 580  LADSKSRKRVRFDPACK-DSSEEELEGTQDSAMINYSMETTTVAEDTCPLPQGMRGVPDH 756
              DSK  KRVRFDP CK DS EEE E T++  M   SME  TV+E     PQ   GVPD+
Sbjct: 239  QLDSKLHKRVRFDPGCKTDSKEEESERTKNLTMETCSMEEATVSEKVSFTPQDPSGVPDY 298

Query: 757  VQNPSKYTRYSFDSSSEVDESANRQAYSDLFNMIKNSSSIDSQLEPPANLPESVIFIPKK 936
            ++NP+KYT Y+FDSSS++DE +NR AY D  NM+K   +++SQ +   +LP++V F P+K
Sbjct: 299  IRNPTKYTHYTFDSSSDIDEESNRCAYMDFLNMLKKPDALESQADKAFDLPKAVTFTPRK 358

Query: 937  KT------DNATTVNQSHNDASKE-SRREGFAPGIAASEVEENGACAMEEDEPEMTTENS 1095
            K+       +++   Q   D  KE   R+G   GIAA + +E   CAM+EDEPE      
Sbjct: 359  KSADTYMMKHSSEFPQKQEDVGKEFMHRKGLPLGIAAEDCQETEVCAMDEDEPEPVASKI 418

Query: 1096 LGQSHKPGRQYRSKA 1140
                 KPGRQYR+KA
Sbjct: 419  STSLQKPGRQYRTKA 433


>ref|XP_002303017.1| predicted protein [Populus trichocarpa] gi|222844743|gb|EEE82290.1|
            predicted protein [Populus trichocarpa]
          Length = 431

 Score =  265 bits (678), Expect = 2e-68
 Identities = 183/443 (41%), Positives = 237/443 (53%), Gaps = 62/443 (13%)
 Frame = +1

Query: 1    MEESFSVRVDKVFGSLS-------KPVESSS----LWSLTDQEIRKKEWNRERGVD---- 135
            ME+SFS RV+K FGSLS       +P  SSS    LW LTD+EI + +W R+R  D    
Sbjct: 1    MEDSFSARVEKAFGSLSSSTVQTQQPSSSSSSISSLWRLTDEEIERNQWIRDRKEDSPEI 60

Query: 136  ----------------------IXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXIRSSIGL 249
                                  I                              I+ SIGL
Sbjct: 61   ETQPQPYFNPERPHDMDFKSDEIERDLDDLDDGEEESRASKLKPEDYNDEEWDIKKSIGL 120

Query: 250  DRTLDNEEEEDEYDKVALGRENTGD-RLYMKDITDYGEYLNSYNVLPDSFKDRERDSRAN 426
            D TLD EEEED YDKVA+GRE  GD RLY+  + DYG  ++S N +P SF+D  RD RAN
Sbjct: 121  DCTLDYEEEEDHYDKVAVGREKAGDERLYVTAMEDYGIDIDSGNEIPSSFEDVARDPRAN 180

Query: 427  LLAAKIRLKEDEEASG-VDTFADVGQEMPGFVDSPVTEDGGNLKSILKRK---------- 573
             LAAKIRLKED EA+  +D+     +E      +    D GNLKSILKRK          
Sbjct: 181  HLAAKIRLKEDAEAAKKMDSLRVTVKE------NTSVSDDGNLKSILKRKKDFQLDSKTI 234

Query: 574  ETLADSKSRKRVRFDPACKDSSEEELEGTQDSAMINYSMETTTVAEDTCPL---PQGMRG 744
            E   DSK RKRVRFDP CKD ++EE +G +D+      METT   E+T      P    G
Sbjct: 235  ENDLDSKLRKRVRFDPECKDGNDEEYDGVEDT-----QMETTDSTEETIVYHFSPDYPSG 289

Query: 745  VPDHVQNPSKYTRYSFDSSSEVDESANRQAYSDLFNMIKNSSSIDSQLEP---PANLPES 915
            +PDH++NPSKYT Y+FDSS++VDE +NR AY D   M++ +   +++L P   P +L + 
Sbjct: 290  IPDHMRNPSKYTHYTFDSSTDVDEESNRGAYMDFLKMLQRAK--NAELHPDDDPVDLSKP 347

Query: 916  VIFIPKKK------TDNATTVNQSHNDASKESR-REGFAPGIAASEVEENGACAMEEDEP 1074
              FIPKKK      TDN     Q+ +DAS++ + R G    IAA +  +   CAMEED+P
Sbjct: 348  FTFIPKKKTGAVTLTDNCIDSKQNWDDASEDFKLRRGVPLRIAAGDDLDTETCAMEEDKP 407

Query: 1075 EMTTENSLGQSHKPGRQYRSKAR 1143
            E   + +   S +P RQYR+KA+
Sbjct: 408  ETAADRT--SSQRPDRQYRTKAK 428


>ref|XP_002512833.1| conserved hypothetical protein [Ricinus communis]
            gi|223547844|gb|EEF49336.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 453

 Score =  259 bits (662), Expect = 1e-66
 Identities = 152/327 (46%), Positives = 209/327 (63%), Gaps = 16/327 (4%)
 Frame = +1

Query: 229  IRSSIGLDRTLDNEEEEDEYDKVALGRENTGDRLYMKDITDYGEYLNSYNVLPDSFKDRE 408
            I++SIGLD TLD EEEED+YDKVA+GRE  GDRLYMKD+TDYG  ++S N  P +FKD  
Sbjct: 132  IKNSIGLDCTLDYEEEEDQYDKVAVGREKAGDRLYMKDMTDYGINVDSSNEFPITFKDVV 191

Query: 409  RDSRANLLAAKIRLKEDEEAS-GVDTFADVGQEMPG-FVDSPVTEDGGNLKSILKRKETL 582
            RD RAN +AAK+RLKED EA+  +DT     ++ P  F D     D GNLK ILKRK+  
Sbjct: 192  RDPRANHIAAKLRLKEDAEAAKKMDTLRVSEKDSPDIFRDHVKMNDDGNLKPILKRKDDE 251

Query: 583  ADSKSR---------KRVRFDPACKDSSEEELEGTQDSAMINYSMETTTVAEDTCPLPQG 735
            ++SK +         KRVRFDP CKD  ++E +   D  M+N S + + V     PLP  
Sbjct: 252  SNSKYKNNQLDLKLQKRVRFDPGCKDGCDKESDEVGDVHMVNDSEDKSLV----YPLPPD 307

Query: 736  M-RGVPDHVQNPSKYTRYSFDSSSEVDESANRQAYSDLFNMIKNSSSIDSQLEPPA-NLP 909
               G+PD+++NPSKYTRY+FDSS++VDE +NRQA+ D   M+K +   DSQ +  +  LP
Sbjct: 308  YPSGIPDYMRNPSKYTRYTFDSSTDVDEQSNRQAFKDFLKMLKKTKGTDSQPDDASGELP 367

Query: 910  ESVIFIPKKKTDNATTVNQSHNDASKES---RREGFAPGIAASEVEENGACAMEEDEPEM 1080
            +SV F+PK+K  ++  V+ S N++ +     +R G    I A++ E++   AM+EDEPE 
Sbjct: 368  KSVTFVPKRKVGDSEMVD-SRNESKQNQDSLQRRGLPISIPAADAEDSKPSAMDEDEPET 426

Query: 1081 TTENSLGQSHKPGRQYRSKARPDDTVP 1161
             T+     S + GR+YR+K RP+   P
Sbjct: 427  ATDKR-ESSQRAGRKYRAKVRPETEDP 452


>ref|XP_002320419.1| predicted protein [Populus trichocarpa] gi|222861192|gb|EEE98734.1|
            predicted protein [Populus trichocarpa]
          Length = 434

 Score =  259 bits (662), Expect = 1e-66
 Identities = 180/446 (40%), Positives = 243/446 (54%), Gaps = 63/446 (14%)
 Frame = +1

Query: 1    MEESFSVRVDKVFGSL---------SKPVES-SSLWSLTDQEIRKKEW------------ 114
            ME+SF VRVDK FGSL          +P  S SSLW LTD+EI + +W            
Sbjct: 1    MEDSFKVRVDKTFGSLPFSSSAIQTQQPSSSLSSLWCLTDEEIERNQWNQDHKGSPETES 60

Query: 115  ----------------NRERGVDIXXXXXRXXXXXXXXXXXXXXXXXXXXXXXX-IRSSI 243
                            N E G D+                               I+ SI
Sbjct: 61   QPQPYFSPERLDDKNLNSEIGKDLVDLDDEDEDDEVESSRALKLKPEDCDDEEWDIKKSI 120

Query: 244  GLDRTLDNEEEEDEYDKVALGRENTGD-RLYMKDITDYGEYLNSYNVLP--DSFKDRERD 414
            GLDRTLD EEEED YDKVA+GRE  GD RLY+  + DYG  ++S +V+P   SF D  RD
Sbjct: 121  GLDRTLDYEEEEDHYDKVAVGREGAGDDRLYVTQMNDYGNDVDSGDVMPMPSSFGDVTRD 180

Query: 415  SRANLLAAKIRLKEDEEASG-VDTFADVGQEMPGFVDSPVTEDGGNLKSILKRKETLADS 591
             RAN LAAK+RL ED EA+  +D+     +E     D  V++DG NLKSILKRK+  +DS
Sbjct: 181  PRANHLAAKVRLLEDAEAAKKMDSLRVTVKE-----DISVSDDG-NLKSILKRKDVQSDS 234

Query: 592  KS---------RKRVRFDPACKDSSEEELEGTQDSAMINYSMETTTVAEDTCPL---PQG 735
            KS         +KRVRFDP CKD ++EE  G +D+      METT   E+T      P  
Sbjct: 235  KSINNHLDSKLQKRVRFDPECKDGNDEESGGVEDT-----QMETTDSTEETQIYHLPPDY 289

Query: 736  MRGVPDHVQNPSKYTRYSFDSSSEVDESANRQAYSDLFNMIKNSSSIDSQL-EPPANLPE 912
              G+PD+++NPSKYTRY+FDS++ VDE +N++AY D   +++  ++ +S   E P +L +
Sbjct: 290  PSGIPDYMRNPSKYTRYTFDSATNVDEESNQEAYMDFLKILQRPNTTESHPDEVPVDLSK 349

Query: 913  SVIFIPKKKT------DNATTVNQSHNDASKESR-REGFAPGIAASEVEENGACAMEEDE 1071
             + FIPK+KT      DN+    Q+ +DAS++ + R G    IAA +  +   CAMEED+
Sbjct: 350  PLTFIPKRKTSGAAVIDNSIDSKQNQDDASEDFKLRRGLPLAIAAFDDNDTETCAMEEDK 409

Query: 1072 PEMTTENSLGQSHKPGRQYRSKARPD 1149
            PE   + +   S +P RQYRSKA+ +
Sbjct: 410  PETAADKT--NSSRPERQYRSKAKSE 433


>ref|XP_002304642.1| predicted protein [Populus trichocarpa] gi|222842074|gb|EEE79621.1|
            predicted protein [Populus trichocarpa]
          Length = 307

 Score =  243 bits (621), Expect = 8e-62
 Identities = 143/307 (46%), Positives = 188/307 (61%), Gaps = 9/307 (2%)
 Frame = +1

Query: 268  EEEEDEYDKVALGRENTGDRLYMKDITDYGEYLNSYNVLPDSFKDRERDSRANLLAAKIR 447
            +EEEDEYDKVA GREN G+R+YMKD+TD G YLN YNV+  S     RDSRAN LAA+IR
Sbjct: 2    QEEEDEYDKVAEGRENAGERMYMKDVTDQGSYLNYYNVISKSLH-ANRDSRANHLAAEIR 60

Query: 448  LKEDE-EASGVDTFADVGQEMPGFVDSPVTEDGGNLKSILKRKETLADSKSRKRVRFDPA 624
            L+ED+ EA  +++  D  + +     +     GG LKSILKRK+  +D KS KRVRF+P 
Sbjct: 61   LQEDQVEAQTLNSHNDCDKAIECQAKASNECGGGQLKSILKRKQYNSDFKSCKRVRFEPG 120

Query: 625  CKDSSEEELEGTQDSAMINYSMETTTVAEDTCPLPQGMRGVPDHVQNPSKYTRYSFDSSS 804
            C    +EE         IN S     V+ED     Q   GVPD+++NP KYTRYSFD S+
Sbjct: 121  CGTVHKEEASVEIQDISINTSSANDLVSEDRSFTVQNAPGVPDYLRNPLKYTRYSFDPST 180

Query: 805  EVDESANRQAYSDLFNMIKNSSSIDSQL-EPPANLPESVIFIPKKKTDN---ATTVNQSH 972
            EVDE +N +AY D   ++K+S S +S+L EP ++LP+SV FIPKKK D     T+ +   
Sbjct: 181  EVDEKSNTRAYMDFSKLVKHSKSTESELEEPSSDLPKSVTFIPKKKADEIKAVTSDSMVK 240

Query: 973  NDASKESRREGFAP----GIAASEVEENGACAMEEDEPEMTTENSLGQSHKPGRQYRSKA 1140
             D    +    +AP     IAA E +E+ A A+ E+EPE    +    SHKP R+YR+K+
Sbjct: 241  QDKGHHNDHHAYAPNFPISIAAGESQESEAGAVAENEPERNIVDRNNSSHKPARRYRTKS 300

Query: 1141 RPDDTVP 1161
              DD  P
Sbjct: 301  SSDDFDP 307


Top