BLASTX nr result

ID: Coptis21_contig00006785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006785
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316052.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002330029.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_002512527.1| conserved hypothetical protein [Ricinus comm...    81   1e-13
ref|XP_003594699.1| hypothetical protein MTR_2g033600 [Medicago ...    74   1e-11
ref|XP_002890512.1| hypothetical protein ARALYDRAFT_889749 [Arab...    69   4e-10

>ref|XP_002316052.1| predicted protein [Populus trichocarpa] gi|222865092|gb|EEF02223.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 45/79 (56%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
 Frame = -1

Query: 388 WSSTMFRWPDFDFSI-STSIFRWPEINFSYITSWWGPISFRLPDLDFSIVDSVFWSLITA 212
           W  ++FRWP+F FS+ S+SI RWPE +FSY T+     S R   LDF+I D V W+ +TA
Sbjct: 5   WYPSIFRWPEFGFSMPSSSILRWPEFDFSYFTTRLTLESLRW--LDFAI-DDVLWTFVTA 61

Query: 211 FESLALVAMLCFFFVFCGC 155
            ES+AL AMLC+FFVFCGC
Sbjct: 62  LESVALTAMLCYFFVFCGC 80


>ref|XP_002330029.1| predicted protein [Populus trichocarpa] gi|222871454|gb|EEF08585.1|
           predicted protein [Populus trichocarpa]
          Length = 96

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 43/90 (47%), Positives = 56/90 (62%), Gaps = 12/90 (13%)
 Frame = -1

Query: 388 WSSTMFR-WPDFDFSISTS--------IFRWPEI--NFSYITSWWGPISF-RLPDLDFSI 245
           WS++ FR W   D + +TS        + RWP      +  + WW P    R P+LDFSI
Sbjct: 5   WSTSTFRQWLGLDVAYTTSSIWASSISVLRWPSQLRTTTNPSRWWAPPRMMRWPELDFSI 64

Query: 244 VDSVFWSLITAFESLALVAMLCFFFVFCGC 155
           +D V WSL+TAFES+ALV+ML FFF+FCGC
Sbjct: 65  LDDVVWSLVTAFESVALVSMLAFFFLFCGC 94


>ref|XP_002512527.1| conserved hypothetical protein [Ricinus communis]
           gi|223548488|gb|EEF49979.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 78

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/79 (50%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
 Frame = -1

Query: 388 WSSTMFRWPDFDFSISTSIFRWPE-INFSYITSWWGPISFRLPDLDFSIVDSVFWSLITA 212
           WS++  RW   D + S  + RWP+ ++ SY++  W  ++     L+FSIVD V W LITA
Sbjct: 5   WSTSALRWLGVDTAYS--LLRWPQFMSSSYLSPRWPELN-----LNFSIVDDVVWGLITA 57

Query: 211 FESLALVAMLCFFFVFCGC 155
           FES+ALV+MLCFFF+FCGC
Sbjct: 58  FESVALVSMLCFFFLFCGC 76


>ref|XP_003594699.1| hypothetical protein MTR_2g033600 [Medicago truncatula]
           gi|124361120|gb|ABN09092.1| hypothetical protein
           MtrDRAFT_AC173289g24v1 [Medicago truncatula]
           gi|355483747|gb|AES64950.1| hypothetical protein
           MTR_2g033600 [Medicago truncatula]
          Length = 85

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
 Frame = -1

Query: 379 TMFRWPDFDFSISTSIFRWPEINFSYITSWWGPISFR--LPDLDFSIVDSVFWSLITAFE 206
           ++FRWP+ D S   S+FRWP +N SY   W    SF+  L   +F +VD V W L+   E
Sbjct: 10  SIFRWPELDLSFPWSVFRWPALNLSY---WNVGRSFQETLLRWNFWLVDDVLWELVRCIE 66

Query: 205 SLALVAMLCFFFVFCGC 155
           SLAL++++C++F+ CGC
Sbjct: 67  SLALLSIICYYFLCCGC 83


>ref|XP_002890512.1| hypothetical protein ARALYDRAFT_889749 [Arabidopsis lyrata subsp.
           lyrata] gi|297336354|gb|EFH66771.1| hypothetical protein
           ARALYDRAFT_889749 [Arabidopsis lyrata subsp. lyrata]
          Length = 80

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
 Frame = -1

Query: 370 RWPDFD---FSISTSIFRWPEINFSYITSWWGPISFRLPDL--DFSIVDSVFWSLITAFE 206
           RW   D   +  S+  FRWPE+N SY++S W   + RL  L  + SI+D + WS ++  E
Sbjct: 5   RWTLMDLPSYLSSSWAFRWPEVNLSYLSSGW---NMRLLSLSGNLSIIDDLLWSFVSIVE 61

Query: 205 SLALVAMLCFFFVFCGC 155
           SLA+V  +C FF+FCGC
Sbjct: 62  SLAIVTTICCFFLFCGC 78


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