BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006782
         (1553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275951.1| PREDICTED: RING finger and transmembrane dom...   594   e-167
emb|CBI15794.3| unnamed protein product [Vitis vinifera]              588   e-165
ref|XP_002265744.1| PREDICTED: RING finger and transmembrane dom...   583   e-164
ref|XP_003552333.1| PREDICTED: RING finger and transmembrane dom...   580   e-163
ref|XP_002326427.1| predicted protein [Populus trichocarpa] gi|2...   578   e-162

>ref|XP_002275951.1| PREDICTED: RING finger and transmembrane domain-containing protein
            2-like [Vitis vinifera]
          Length = 447

 Score =  594 bits (1531), Expect = e-167
 Identities = 298/368 (80%), Positives = 315/368 (85%), Gaps = 16/368 (4%)
 Frame = +3

Query: 18   EVSIRIIGAGEH-------DNVRLGXXXXXXXXXXXXXXADESGA---------TTADAP 149
            EVSIRIIGAGE        DN R                 +ESG+         +TAD  
Sbjct: 80   EVSIRIIGAGEQEREAVSLDNDRSSSEQISEAPAVSDASRNESGSGVAAVNSGGSTADGE 139

Query: 150  SGDGDTTNRGDSSYQRYDIQQVARWIEQILPFSLLLLVVFIRQHLQGFFVTIWVAAVMFK 329
              +G + N  DSSYQRYDIQQ ARWIEQILPFSLLLLVVFIRQHLQGFFVTIW+AAVMFK
Sbjct: 140  PANGGSVNNRDSSYQRYDIQQFARWIEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVMFK 199

Query: 330  SNDILRKQTALKGERKMSVLAGIAVVFLFHVIGVYWWYRNDDLLYPLVMLPPKAIPPFWH 509
            SNDILRKQTALKGERK+SVL GI  VF+ HVI VYWWYRN+DLLYPLV+LPPKAIPPFWH
Sbjct: 200  SNDILRKQTALKGERKLSVLTGITAVFMLHVICVYWWYRNNDLLYPLVLLPPKAIPPFWH 259

Query: 510  AIFTIMVNDTMVRQAAMILKCILLMYYKNSRGRNYRKQGQMLTLVEYMLLLYRALLPTPV 689
            AIF IMVNDTMVRQAAM LKCILLMYYKNSRGR+YRKQGQMLTLVEY+LLLYRALLPTPV
Sbjct: 260  AIFIIMVNDTMVRQAAMALKCILLMYYKNSRGRDYRKQGQMLTLVEYLLLLYRALLPTPV 319

Query: 690  WYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKVQSFFTALKALSHKEVHYGSYATSDQV 869
            WYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKVQSFF AL+ALS KEVHYGSYATS+QV
Sbjct: 320  WYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKVQSFFAALRALSRKEVHYGSYATSEQV 379

Query: 870  NAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGS 1049
            NAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAD+RS+GDGS
Sbjct: 380  NAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADIRSYGDGS 439

Query: 1050 TSLFFQLF 1073
            TSLFFQ+F
Sbjct: 440  TSLFFQIF 447


>emb|CBI15794.3| unnamed protein product [Vitis vinifera]
          Length = 417

 Score =  588 bits (1515), Expect = e-165
 Identities = 284/320 (88%), Positives = 299/320 (93%)
 Frame = +3

Query: 114  ADESGATTADAPSGDGDTTNRGDSSYQRYDIQQVARWIEQILPFSLLLLVVFIRQHLQGF 293
            A  SG +TAD    +G + N  DSSYQRYDIQQ ARWIEQILPFSLLLLVVFIRQHLQGF
Sbjct: 98   AVNSGGSTADGEPANGGSVNNRDSSYQRYDIQQFARWIEQILPFSLLLLVVFIRQHLQGF 157

Query: 294  FVTIWVAAVMFKSNDILRKQTALKGERKMSVLAGIAVVFLFHVIGVYWWYRNDDLLYPLV 473
            FVTIW+AAVMFKSNDILRKQTALKGERK+SVL GI  VF+ HVI VYWWYRN+DLLYPLV
Sbjct: 158  FVTIWIAAVMFKSNDILRKQTALKGERKLSVLTGITAVFMLHVICVYWWYRNNDLLYPLV 217

Query: 474  MLPPKAIPPFWHAIFTIMVNDTMVRQAAMILKCILLMYYKNSRGRNYRKQGQMLTLVEYM 653
            +LPPKAIPPFWHAIF IMVNDTMVRQAAM LKCILLMYYKNSRGR+YRKQGQMLTLVEY+
Sbjct: 218  LLPPKAIPPFWHAIFIIMVNDTMVRQAAMALKCILLMYYKNSRGRDYRKQGQMLTLVEYL 277

Query: 654  LLLYRALLPTPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKVQSFFTALKALSHKE 833
            LLLYRALLPTPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKVQSFF AL+ALS KE
Sbjct: 278  LLLYRALLPTPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKVQSFFAALRALSRKE 337

Query: 834  VHYGSYATSDQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALV 1013
            VHYGSYATS+QVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALV
Sbjct: 338  VHYGSYATSEQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALV 397

Query: 1014 KPADLRSFGDGSTSLFFQLF 1073
            KPAD+RS+GDGSTSLFFQ+F
Sbjct: 398  KPADIRSYGDGSTSLFFQIF 417


>ref|XP_002265744.1| PREDICTED: RING finger and transmembrane domain-containing protein
            2-like [Vitis vinifera]
          Length = 462

 Score =  583 bits (1503), Expect = e-164
 Identities = 291/388 (75%), Positives = 311/388 (80%), Gaps = 32/388 (8%)
 Frame = +3

Query: 6    AGGGEVSIRIIGAGEHDNVRLGXXXXXXXXXXXXXXA----------------------- 116
            + GGEVSIRIIGAGE +N R+G                                      
Sbjct: 75   SNGGEVSIRIIGAGEQENERVGAGLASLAVGPVRDNEASVQQIAGQGSGTVTLEGHGQGQ 134

Query: 117  ---------DESGATTADAPSGDGDTTNRGDSSYQRYDIQQVARWIEQILPFSLLLLVVF 269
                      +SG    D  + DG   N  DSSYQRYDIQQ ARWIEQ+LPF+LLLLVVF
Sbjct: 135  GESRAGEGISQSGNGNGDGEAADGAGANGRDSSYQRYDIQQAARWIEQVLPFTLLLLVVF 194

Query: 270  IRQHLQGFFVTIWVAAVMFKSNDILRKQTALKGERKMSVLAGIAVVFLFHVIGVYWWYRN 449
            IRQHLQGFFVTIW++AVMFKSN+ILRKQTALKGERK+SVL GI++VF  HV GVYWWY N
Sbjct: 195  IRQHLQGFFVTIWISAVMFKSNEILRKQTALKGERKISVLVGISLVFTLHVAGVYWWYHN 254

Query: 450  DDLLYPLVMLPPKAIPPFWHAIFTIMVNDTMVRQAAMILKCILLMYYKNSRGRNYRKQGQ 629
             DLLYPL+MLPPKAIPPFWHAIF IMVNDT+VRQAAM+ KCILLMYYKNSRGRNYRKQGQ
Sbjct: 255  GDLLYPLIMLPPKAIPPFWHAIFIIMVNDTLVRQAAMVFKCILLMYYKNSRGRNYRKQGQ 314

Query: 630  MLTLVEYMLLLYRALLPTPVWYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKVQSFFTA 809
            +LTLVEY LLLYRALLP PVWYRFFLNKEYGSLFSSL TGLYLTFKLTSVVEKVQSFF A
Sbjct: 315  LLTLVEYTLLLYRALLPAPVWYRFFLNKEYGSLFSSLMTGLYLTFKLTSVVEKVQSFFAA 374

Query: 810  LKALSHKEVHYGSYATSDQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERT 989
            LKALS KEVHYG+YATS+QVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERT
Sbjct: 375  LKALSRKEVHYGAYATSEQVNAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERT 434

Query: 990  CPLCRALVKPADLRSFGDGSTSLFFQLF 1073
            CPLCRALVKPADLRS+GDGSTSLFFQLF
Sbjct: 435  CPLCRALVKPADLRSYGDGSTSLFFQLF 462


>ref|XP_003552333.1| PREDICTED: RING finger and transmembrane domain-containing protein
            2-like [Glycine max]
          Length = 440

 Score =  580 bits (1494), Expect = e-163
 Identities = 288/368 (78%), Positives = 306/368 (83%), Gaps = 15/368 (4%)
 Frame = +3

Query: 15   GEVSIRIIGAGEHDN---------------VRLGXXXXXXXXXXXXXXADESGATTADAP 149
            GEVSIRIIG  E +                V L                D  GA   +  
Sbjct: 74   GEVSIRIIGPAEQEQREEQQLQQTPPPGLVVGLSHSQNDTVLASGSPRGDAEGAAGTEGA 133

Query: 150  SGDGDTTNRGDSSYQRYDIQQVARWIEQILPFSLLLLVVFIRQHLQGFFVTIWVAAVMFK 329
            +  GD   R DSSYQRYDIQ  ARWIEQ+LPFSLLLLVVFIRQHLQGFFVTIW+AAV+FK
Sbjct: 134  AAGGDGAGR-DSSYQRYDIQHAARWIEQVLPFSLLLLVVFIRQHLQGFFVTIWIAAVLFK 192

Query: 330  SNDILRKQTALKGERKMSVLAGIAVVFLFHVIGVYWWYRNDDLLYPLVMLPPKAIPPFWH 509
            SNDILRKQTALKGERKM VL GI+V F  HV+GVYWWY+NDDL+YPL+MLPPK IPPFWH
Sbjct: 193  SNDILRKQTALKGERKMLVLVGISVGFALHVVGVYWWYQNDDLMYPLIMLPPKDIPPFWH 252

Query: 510  AIFTIMVNDTMVRQAAMILKCILLMYYKNSRGRNYRKQGQMLTLVEYMLLLYRALLPTPV 689
            AIF IMVNDT+VRQAAM+ KCILLMYYKNSRGRNYRKQGQMLTLVEY+LLLYRALLPTPV
Sbjct: 253  AIFIIMVNDTLVRQAAMVFKCILLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPV 312

Query: 690  WYRFFLNKEYGSLFSSLTTGLYLTFKLTSVVEKVQSFFTALKALSHKEVHYGSYATSDQV 869
            WYRFFLNKEYGSLFSSL TGLYLTFKLTSVVEKVQSFF A+KALS KE+HYG+YATS+QV
Sbjct: 313  WYRFFLNKEYGSLFSSLMTGLYLTFKLTSVVEKVQSFFAAVKALSRKEMHYGAYATSEQV 372

Query: 870  NAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGS 1049
            NAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGS
Sbjct: 373  NAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGS 432

Query: 1050 TSLFFQLF 1073
            TSLFFQLF
Sbjct: 433  TSLFFQLF 440


>ref|XP_002326427.1| predicted protein [Populus trichocarpa] gi|222833620|gb|EEE72097.1|
            predicted protein [Populus trichocarpa]
          Length = 443

 Score =  578 bits (1490), Expect = e-162
 Identities = 281/356 (78%), Positives = 308/356 (86%)
 Frame = +3

Query: 6    AGGGEVSIRIIGAGEHDNVRLGXXXXXXXXXXXXXXADESGATTADAPSGDGDTTNRGDS 185
            +  GEV+IRIIG+GEH++ R                 +ES +   D  + DG   N  DS
Sbjct: 90   SNNGEVAIRIIGSGEHEHDR--DSSGGLVVGQVGGGQNESSSVGGDGEAADGAGGNGRDS 147

Query: 186  SYQRYDIQQVARWIEQILPFSLLLLVVFIRQHLQGFFVTIWVAAVMFKSNDILRKQTALK 365
            +YQRYDIQQ ARWIEQ+LPFSLLLLVVFIRQHLQGFFVTIW+A VMFKSNDILRKQTALK
Sbjct: 148  TYQRYDIQQAARWIEQVLPFSLLLLVVFIRQHLQGFFVTIWIAVVMFKSNDILRKQTALK 207

Query: 366  GERKMSVLAGIAVVFLFHVIGVYWWYRNDDLLYPLVMLPPKAIPPFWHAIFTIMVNDTMV 545
            GERK+S+L GI++ F  HV+GVYWWY+NDDLLYPL+MLPPK+IPPFWHAIF IMVNDT+V
Sbjct: 208  GERKVSMLVGISLAFAIHVVGVYWWYQNDDLLYPLIMLPPKSIPPFWHAIFIIMVNDTLV 267

Query: 546  RQAAMILKCILLMYYKNSRGRNYRKQGQMLTLVEYMLLLYRALLPTPVWYRFFLNKEYGS 725
            RQAAM+ KCILL+ YKNSRGRNYRKQGQMLTLVEY++LLYRALLPTPVWYRFFLNKEYGS
Sbjct: 268  RQAAMVFKCILLISYKNSRGRNYRKQGQMLTLVEYLMLLYRALLPTPVWYRFFLNKEYGS 327

Query: 726  LFSSLTTGLYLTFKLTSVVEKVQSFFTALKALSHKEVHYGSYATSDQVNAAGDLCAICQE 905
            LFSSL TGLYLTFKLTSVVEKVQSF  ALKALS KEVHYG+YATS+QVNAAGDLCAICQE
Sbjct: 328  LFSSLMTGLYLTFKLTSVVEKVQSFCAALKALSRKEVHYGAYATSEQVNAAGDLCAICQE 387

Query: 906  KMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF 1073
            KMHAPILLRCKHIFCEDCVSEWFERE TCPLCRALVKPADLRSF DGSTSL FQ+F
Sbjct: 388  KMHAPILLRCKHIFCEDCVSEWFEREGTCPLCRALVKPADLRSFSDGSTSLLFQIF 443