BLASTX nr result

ID: Coptis21_contig00006781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006781
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20217.3| unnamed protein product [Vitis vinifera]              137   9e-31
ref|XP_002282987.1| PREDICTED: uncharacterized protein ycf45 [Vi...   137   9e-31
emb|CAN66201.1| hypothetical protein VITISV_007543 [Vitis vinifera]   137   9e-31
ref|XP_002298905.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_003525995.1| PREDICTED: uncharacterized protein ycf45-lik...   120   9e-26

>emb|CBI20217.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  137 bits (345), Expect = 9e-31
 Identities = 68/89 (76%), Positives = 81/89 (91%)
 Frame = -2

Query: 283 IRLYVYGILETSVIQGIRQLKEDDAVELTDNISEADAMLALQSRLKKNTRIQAVAKSHNI 104
           +R++ YGILETSVIQGI+QLK +D VELTDNISEADA+LALQS+LKKN+RIQA AKSH+I
Sbjct: 364 VRVFAYGILETSVIQGIKQLKMNDKVELTDNISEADALLALQSKLKKNSRIQAAAKSHDI 423

Query: 103 PIYVTKTSSLVQITKAIRVLLSEHADGMK 17
           PIYVTKT SLVQITKA+R +L+ HAD +K
Sbjct: 424 PIYVTKTCSLVQITKAVRAILNGHADDLK 452


>ref|XP_002282987.1| PREDICTED: uncharacterized protein ycf45 [Vitis vinifera]
          Length = 667

 Score =  137 bits (345), Expect = 9e-31
 Identities = 68/89 (76%), Positives = 81/89 (91%)
 Frame = -2

Query: 283 IRLYVYGILETSVIQGIRQLKEDDAVELTDNISEADAMLALQSRLKKNTRIQAVAKSHNI 104
           +R++ YGILETSVIQGI+QLK +D VELTDNISEADA+LALQS+LKKN+RIQA AKSH+I
Sbjct: 459 VRVFAYGILETSVIQGIKQLKMNDKVELTDNISEADALLALQSKLKKNSRIQAAAKSHDI 518

Query: 103 PIYVTKTSSLVQITKAIRVLLSEHADGMK 17
           PIYVTKT SLVQITKA+R +L+ HAD +K
Sbjct: 519 PIYVTKTCSLVQITKAVRAILNGHADDLK 547


>emb|CAN66201.1| hypothetical protein VITISV_007543 [Vitis vinifera]
          Length = 693

 Score =  137 bits (345), Expect = 9e-31
 Identities = 68/89 (76%), Positives = 81/89 (91%)
 Frame = -2

Query: 283 IRLYVYGILETSVIQGIRQLKEDDAVELTDNISEADAMLALQSRLKKNTRIQAVAKSHNI 104
           +R++ YGILETSVIQGI+QLK +D VELTDNISEADA+LALQS+LKKN+RIQA AKSH+I
Sbjct: 485 VRVFAYGILETSVIQGIKQLKMNDKVELTDNISEADALLALQSKLKKNSRIQAAAKSHDI 544

Query: 103 PIYVTKTSSLVQITKAIRVLLSEHADGMK 17
           PIYVTKT SLVQITKA+R +L+ HAD +K
Sbjct: 545 PIYVTKTCSLVQITKAVRAILNGHADDLK 573


>ref|XP_002298905.1| predicted protein [Populus trichocarpa] gi|222846163|gb|EEE83710.1|
           predicted protein [Populus trichocarpa]
          Length = 654

 Score =  136 bits (343), Expect = 2e-30
 Identities = 70/87 (80%), Positives = 78/87 (89%)
 Frame = -2

Query: 277 LYVYGILETSVIQGIRQLKEDDAVELTDNISEADAMLALQSRLKKNTRIQAVAKSHNIPI 98
           LYVYGILETSVIQGI QLK D AV LTDNIS+ADA+LALQS+LKKN +IQA AKSH+IPI
Sbjct: 448 LYVYGILETSVIQGINQLKMDAAVRLTDNISDADALLALQSKLKKNAKIQAAAKSHDIPI 507

Query: 97  YVTKTSSLVQITKAIRVLLSEHADGMK 17
           YVTKTSSL QITKAIR L+S HA+G+K
Sbjct: 508 YVTKTSSLEQITKAIRALMSSHANGLK 534


>ref|XP_003525995.1| PREDICTED: uncharacterized protein ycf45-like [Glycine max]
          Length = 651

 Score =  120 bits (302), Expect = 9e-26
 Identities = 61/90 (67%), Positives = 77/90 (85%), Gaps = 1/90 (1%)
 Frame = -2

Query: 283 IRLYVYGILETSVIQGIRQLKEDDA-VELTDNISEADAMLALQSRLKKNTRIQAVAKSHN 107
           + L+ YGILE +VIQG++QLK +DA ++LTDNISEA+A+LALQS+LKKN  IQA AKSH+
Sbjct: 443 LSLFCYGILEATVIQGVKQLKMNDAAIQLTDNISEANALLALQSKLKKNPGIQAAAKSHD 502

Query: 106 IPIYVTKTSSLVQITKAIRVLLSEHADGMK 17
           IPIYVTKTSSL  + KAIR L+S+H DG+K
Sbjct: 503 IPIYVTKTSSLEHVAKAIRALVSDHEDGIK 532


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