BLASTX nr result

ID: Coptis21_contig00006780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006780
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66201.1| hypothetical protein VITISV_007543 [Vitis vinifera]    73   3e-22
ref|XP_002282987.1| PREDICTED: uncharacterized protein ycf45 [Vi...    73   3e-22
emb|CBI20217.3| unnamed protein product [Vitis vinifera]               73   3e-22
ref|XP_002298905.1| predicted protein [Populus trichocarpa] gi|2...    69   1e-21
ref|XP_003525995.1| PREDICTED: uncharacterized protein ycf45-lik...    60   5e-19

>emb|CAN66201.1| hypothetical protein VITISV_007543 [Vitis vinifera]
          Length = 693

 Score = 73.2 bits (178), Expect(2) = 3e-22
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = -2

Query: 263 ILETSVIQGIRQLKEDDAVELTDNISEADAMLALQSRLKKNTRISS 126
           ILETSVIQGI+QLK +D VELTDNISEADA+LALQS+LKKN+RI +
Sbjct: 492 ILETSVIQGIKQLKMNDKVELTDNISEADALLALQSKLKKNSRIQA 537



 Score = 56.6 bits (135), Expect(2) = 3e-22
 Identities = 26/38 (68%), Positives = 32/38 (84%)
 Frame = -3

Query: 130 QAVAKSHNIPIYVTKTSSLVQITKAIQVLLSEHVDGMK 17
           QA AKSH+IPIYVTKT SLVQITKA++ +L+ H D +K
Sbjct: 536 QAAAKSHDIPIYVTKTCSLVQITKAVRAILNGHADDLK 573


>ref|XP_002282987.1| PREDICTED: uncharacterized protein ycf45 [Vitis vinifera]
          Length = 667

 Score = 73.2 bits (178), Expect(2) = 3e-22
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = -2

Query: 263 ILETSVIQGIRQLKEDDAVELTDNISEADAMLALQSRLKKNTRISS 126
           ILETSVIQGI+QLK +D VELTDNISEADA+LALQS+LKKN+RI +
Sbjct: 466 ILETSVIQGIKQLKMNDKVELTDNISEADALLALQSKLKKNSRIQA 511



 Score = 56.6 bits (135), Expect(2) = 3e-22
 Identities = 26/38 (68%), Positives = 32/38 (84%)
 Frame = -3

Query: 130 QAVAKSHNIPIYVTKTSSLVQITKAIQVLLSEHVDGMK 17
           QA AKSH+IPIYVTKT SLVQITKA++ +L+ H D +K
Sbjct: 510 QAAAKSHDIPIYVTKTCSLVQITKAVRAILNGHADDLK 547


>emb|CBI20217.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score = 73.2 bits (178), Expect(2) = 3e-22
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = -2

Query: 263 ILETSVIQGIRQLKEDDAVELTDNISEADAMLALQSRLKKNTRISS 126
           ILETSVIQGI+QLK +D VELTDNISEADA+LALQS+LKKN+RI +
Sbjct: 371 ILETSVIQGIKQLKMNDKVELTDNISEADALLALQSKLKKNSRIQA 416



 Score = 56.6 bits (135), Expect(2) = 3e-22
 Identities = 26/38 (68%), Positives = 32/38 (84%)
 Frame = -3

Query: 130 QAVAKSHNIPIYVTKTSSLVQITKAIQVLLSEHVDGMK 17
           QA AKSH+IPIYVTKT SLVQITKA++ +L+ H D +K
Sbjct: 415 QAAAKSHDIPIYVTKTCSLVQITKAVRAILNGHADDLK 452


>ref|XP_002298905.1| predicted protein [Populus trichocarpa] gi|222846163|gb|EEE83710.1|
           predicted protein [Populus trichocarpa]
          Length = 654

 Score = 68.6 bits (166), Expect(2) = 1e-21
 Identities = 35/46 (76%), Positives = 40/46 (86%)
 Frame = -2

Query: 263 ILETSVIQGIRQLKEDDAVELTDNISEADAMLALQSRLKKNTRISS 126
           ILETSVIQGI QLK D AV LTDNIS+ADA+LALQS+LKKN +I +
Sbjct: 453 ILETSVIQGINQLKMDAAVRLTDNISDADALLALQSKLKKNAKIQA 498



 Score = 59.7 bits (143), Expect(2) = 1e-21
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = -3

Query: 148 KRILGFQAVAKSHNIPIYVTKTSSLVQITKAIQVLLSEHVDGMK 17
           K+    QA AKSH+IPIYVTKTSSL QITKAI+ L+S H +G+K
Sbjct: 491 KKNAKIQAAAKSHDIPIYVTKTSSLEQITKAIRALMSSHANGLK 534


>ref|XP_003525995.1| PREDICTED: uncharacterized protein ycf45-like [Glycine max]
          Length = 651

 Score = 60.1 bits (144), Expect(2) = 5e-19
 Identities = 31/47 (65%), Positives = 41/47 (87%), Gaps = 1/47 (2%)
 Frame = -2

Query: 263 ILETSVIQGIRQLKEDDA-VELTDNISEADAMLALQSRLKKNTRISS 126
           ILE +VIQG++QLK +DA ++LTDNISEA+A+LALQS+LKKN  I +
Sbjct: 450 ILEATVIQGVKQLKMNDAAIQLTDNISEANALLALQSKLKKNPGIQA 496



 Score = 58.9 bits (141), Expect(2) = 5e-19
 Identities = 28/44 (63%), Positives = 35/44 (79%)
 Frame = -3

Query: 148 KRILGFQAVAKSHNIPIYVTKTSSLVQITKAIQVLLSEHVDGMK 17
           K+  G QA AKSH+IPIYVTKTSSL  + KAI+ L+S+H DG+K
Sbjct: 489 KKNPGIQAAAKSHDIPIYVTKTSSLEHVAKAIRALVSDHEDGIK 532


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