BLASTX nr result

ID: Coptis21_contig00006779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006779
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531987.1| conserved hypothetical protein [Ricinus comm...   126   3e-27
emb|CAN62371.1| hypothetical protein VITISV_001850 [Vitis vinifera]   122   5e-26
emb|CAN78177.1| hypothetical protein VITISV_037684 [Vitis vinifera]   119   3e-25
ref|XP_002510022.1| conserved hypothetical protein [Ricinus comm...   116   3e-24
ref|XP_004143420.1| PREDICTED: EPIDERMAL PATTERNING FACTOR-like ...   114   8e-24

>ref|XP_002531987.1| conserved hypothetical protein [Ricinus communis]
           gi|223528346|gb|EEF30386.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 135

 Score =  126 bits (316), Expect = 3e-27
 Identities = 69/139 (49%), Positives = 82/139 (58%), Gaps = 11/139 (7%)
 Frame = +2

Query: 113 MGCS----HNCKTIQRHRHXXXXXXXXXXXXXAQVRYMVEGRTVPKLLDDQATSQVGGEV 280
           MGCS    H+    QR  +              QVR+  EGR  PK     + SQ   E 
Sbjct: 1   MGCSDCTHHSFLLCQRLGYVTISFMFLLISSSTQVRFKAEGRATPK---SASFSQTVNEE 57

Query: 281 KAVMRGQIGSRPPRCDRRCSTCGHCEAVQVPAVPQAKSKSRHTTVS-------MRGEDAG 439
           K +MR QIGSRPPRC++RCSTCGHCEA+QVP  PQ    +R+ + S        RG+DA 
Sbjct: 58  KMLMRSQIGSRPPRCEKRCSTCGHCEAIQVPTNPQINHGNRNYSSSTFSNVAYARGDDA- 116

Query: 440 SNYKPMSWKCKCGDMIFNP 496
           SNYKPMSWKCKCGD+IFNP
Sbjct: 117 SNYKPMSWKCKCGDLIFNP 135


>emb|CAN62371.1| hypothetical protein VITISV_001850 [Vitis vinifera]
          Length = 534

 Score =  122 bits (305), Expect = 5e-26
 Identities = 68/139 (48%), Positives = 80/139 (57%), Gaps = 9/139 (6%)
 Frame = +2

Query: 107 LRMGCSHNCKTIQ----RHRHXXXXXXXXXXXXXAQVRYMVEGRTVPKLLDDQATSQVGG 274
           ++ GC    K I+    R+R               Q R+M EGR V KL+   A +  G 
Sbjct: 396 IQFGCRVARKDIEVYQSRNRQLIISLLILLASNFTQERFMAEGRLVSKLVGXVAQTYKGR 455

Query: 275 EVKAVMRGQIGSRPPRCDRRCSTCGHCEAVQVPAVPQAKS-KSRH----TTVSMRGEDAG 439
           E   VMR QIGSRPPRC RRCS+CGHCEAVQVP VPQ  S ++ H     TV     D  
Sbjct: 456 EEMVVMRNQIGSRPPRCQRRCSSCGHCEAVQVPIVPQLHSHRTSHFYAAPTVEYSRGDYI 515

Query: 440 SNYKPMSWKCKCGDMIFNP 496
           SNYKPM+WKCKCG+ IFNP
Sbjct: 516 SNYKPMTWKCKCGNAIFNP 534


>emb|CAN78177.1| hypothetical protein VITISV_037684 [Vitis vinifera]
          Length = 131

 Score =  119 bits (298), Expect = 3e-25
 Identities = 60/133 (45%), Positives = 80/133 (60%), Gaps = 5/133 (3%)
 Frame = +2

Query: 113 MGCSHNCKTIQRHRHXXXXXXXXXXXXXAQVRYMVEGRTVPKLLDDQATSQVGGEVKAVM 292
           MG   N  +I   R+              Q+++M EGR V  L      SQ   E KA++
Sbjct: 1   MGWCPNFTSIHGLRYITIYLLFLLILSSTQLKFMAEGRAV--LFKPVGFSQPVSEEKAIV 58

Query: 293 RGQIGSRPPRCDRRCSTCGHCEAVQVPAVPQAKSKSRHT-----TVSMRGEDAGSNYKPM 457
           R QIGSRPP+C+RRC++CGHCEA+QVPA PQ K+ + ++     T++    D  SNYKPM
Sbjct: 59  RAQIGSRPPKCERRCNSCGHCEAIQVPANPQVKTPNTNSSTVVGTIAYSRGDDNSNYKPM 118

Query: 458 SWKCKCGDMIFNP 496
           SWKCKCG+ +FNP
Sbjct: 119 SWKCKCGNFVFNP 131


>ref|XP_002510022.1| conserved hypothetical protein [Ricinus communis]
           gi|223550723|gb|EEF52209.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 135

 Score =  116 bits (290), Expect = 3e-24
 Identities = 61/136 (44%), Positives = 75/136 (55%), Gaps = 8/136 (5%)
 Frame = +2

Query: 113 MGCSHNCKTIQRHRHXXXXXXXXXXXXXAQVRYMVEGRTVPKLLDDQATSQVGGEVKAVM 292
           MG +  C    R+RH               VR++ EGR +PK L+ +   +   E  AV 
Sbjct: 1   MGSAQFCYFCNRNRHLTISLLFLLLSCSTLVRFVAEGRAIPKPLESETQKEEMDEKMAVR 60

Query: 293 RGQIGSRPPRCDRRCSTCGHCEAVQVPAVPQAKSKSRHTTVS--------MRGEDAGSNY 448
              IGS PPRCDRRC++CGHCEAVQVP   +  S  R   +S         RG D  SNY
Sbjct: 61  SRVIGSTPPRCDRRCNSCGHCEAVQVPVTTRIVSHKRSAHLSTAISNIAYSRG-DGISNY 119

Query: 449 KPMSWKCKCGDMIFNP 496
           KPMSWKCKCG++IFNP
Sbjct: 120 KPMSWKCKCGNLIFNP 135


>ref|XP_004143420.1| PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2-like [Cucumis
           sativus] gi|449525718|ref|XP_004169863.1| PREDICTED:
           EPIDERMAL PATTERNING FACTOR-like protein 2-like [Cucumis
           sativus]
          Length = 131

 Score =  114 bits (286), Expect = 8e-24
 Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
 Frame = +2

Query: 200 QVRYMVEGRTVPKLLDDQATSQVGGEVKAVMRGQIGSRPPRCDRRCSTCGHCEAVQVPAV 379
           Q+R+M EGR + +       +    E K V+RGQIGSRPP+C+RRCS CGHCEA+QVPA 
Sbjct: 35  QMRFMAEGRFISR----NGKTVNNSEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPAN 90

Query: 380 PQAKSKSRHTTVS--MRGEDAGSNYKPMSWKCKCGDMIFNP 496
           PQ       +T+       D  SNYKPMSWKCKCG +IFNP
Sbjct: 91  PQKSGTKNSSTMKNIAYARDEASNYKPMSWKCKCGSLIFNP 131


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