BLASTX nr result

ID: Coptis21_contig00006762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006762
         (1300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277967.1| PREDICTED: uncharacterized protein LOC100267...   344   3e-92
emb|CBI32668.3| unnamed protein product [Vitis vinifera]              310   5e-82
ref|XP_002322830.1| predicted protein [Populus trichocarpa] gi|2...   287   5e-75
ref|XP_002308480.1| predicted protein [Populus trichocarpa] gi|2...   282   2e-73
ref|XP_002881505.1| hypothetical protein ARALYDRAFT_482732 [Arab...   281   3e-73

>ref|XP_002277967.1| PREDICTED: uncharacterized protein LOC100267054 [Vitis vinifera]
          Length = 351

 Score =  344 bits (883), Expect = 3e-92
 Identities = 186/353 (52%), Positives = 243/353 (68%), Gaps = 25/353 (7%)
 Frame = +2

Query: 29   MESMARISQKNPLINLTTQNTLPLFPKPIS-FTFKP----------FTKPLKLTSTY--H 169
            MES+A++ Q+   ++L+  +  P F +PIS F+F+           F +     S++  H
Sbjct: 1    MESLAKLHQRQQPLHLSLYDHRPSFSRPISSFSFRTSSSSSTSKSLFVRASSSPSSFSRH 60

Query: 170  HP----QIPKNPFSS-----FLKTTCITLVTSTLFITQFNNKPSLAAQTQPPLVETTKEE 322
             P    Q PK+PF       F K +CI +  + +F  +FN KP +AA      VE  K+ 
Sbjct: 61   SPTQDHQNPKSPFFETLLPHFFKASCIAIAAAAVFFARFNVKPVIAAPAAT--VEPFKQS 118

Query: 323  SVDT--DEDKERVFEEYLDTHPDDLKALKGLMEVKIKTRKFEEAIAVIDRLIGIQPFEKE 496
            ++D+  DE+KER  EEY+++HPDD++ LK LMEVKIK RK +EA+ VI+RLI ++P +KE
Sbjct: 119  TMDSVSDEEKERTVEEYVESHPDDVEGLKSLMEVKIKNRKLQEAVDVIERLIQLEPDDKE 178

Query: 497  WVLLKAHVYSYSGDIEMAKFAFEQLLGEDPLFVEAYHGLVMVTSQLGEG-ELEDVMKKIE 673
            W LLKAH+YSYSG+ E+AK  FE++L  +PL VEAYHGLVM  SQ   G EL  V+K+IE
Sbjct: 179  WPLLKAHLYSYSGESELAKLGFEEILSANPLTVEAYHGLVMAVSQSDSGDELNQVLKRIE 238

Query: 674  SAIXXXXXXXXXXXXXXXXXXVAQVRVVEGKYTDALKVYEELVKDEPRDFRPYLCQGIIY 853
            +A+                  VAQ+RV+EGKY DALKVY+ELVK+EPRDFRPYLCQGIIY
Sbjct: 239  AAMERCKKEKKKEDLRDFKLLVAQIRVIEGKYNDALKVYQELVKEEPRDFRPYLCQGIIY 298

Query: 854  TLLKRTDEAEKQFQKYRRLVPKGHPYARYFEDNMIATKIFSQMAGNQRTGSMS 1012
            TLL++ DEAEKQFQKYRRLVPKGHPYARYF+DNMIAT++FSQMA NQR+GS S
Sbjct: 299  TLLRKKDEAEKQFQKYRRLVPKGHPYARYFDDNMIATRVFSQMAENQRSGSKS 351


>emb|CBI32668.3| unnamed protein product [Vitis vinifera]
          Length = 314

 Score =  310 bits (794), Expect = 5e-82
 Identities = 165/317 (52%), Positives = 217/317 (68%), Gaps = 4/317 (1%)
 Frame = +2

Query: 29  MESMARISQKNPLINLTTQNTLPLFPKPIS-FTFKPFTKPLKLTSTYHHPQIPKNPFSSF 205
           MES+A++ Q+   ++L+  +  P F +PIS F+F+  +      S +       + FS  
Sbjct: 1   MESLAKLHQRQQPLHLSLYDHRPSFSRPISSFSFRTSSSSSTSKSLFVRASSSPSSFSP- 59

Query: 206 LKTTCITLVTSTLFITQFNNKPSLAAQTQPPLVETTKEESVDT--DEDKERVFEEYLDTH 379
                     + +F  +FN KP +AA      VE  K+ ++D+  DE+KER  EEY+++H
Sbjct: 60  ---------AAAVFFARFNVKPVIAAPAAT--VEPFKQSTMDSVSDEEKERTVEEYVESH 108

Query: 380 PDDLKALKGLMEVKIKTRKFEEAIAVIDRLIGIQPFEKEWVLLKAHVYSYSGDIEMAKFA 559
           PDD++ LK LMEVKIK RK +EA+ VI+RLI ++P +KEW LLKAH+YSYSG+ E+AK  
Sbjct: 109 PDDVEGLKSLMEVKIKNRKLQEAVDVIERLIQLEPDDKEWPLLKAHLYSYSGESELAKLG 168

Query: 560 FEQLLGEDPLFVEAYHGLVMVTSQLGEG-ELEDVMKKIESAIXXXXXXXXXXXXXXXXXX 736
           FE++L  +PL VEAYHGLVM  SQ   G EL  V+K+IE+A+                  
Sbjct: 169 FEEILSANPLTVEAYHGLVMAVSQSDSGDELNQVLKRIEAAMERCKKEKKKEDLRDFKLL 228

Query: 737 VAQVRVVEGKYTDALKVYEELVKDEPRDFRPYLCQGIIYTLLKRTDEAEKQFQKYRRLVP 916
           VAQ+RV+EGKY DALKVY+ELVK+EPRDFRPYLCQGIIYTLL++ DEAEKQFQKYRRLVP
Sbjct: 229 VAQIRVIEGKYNDALKVYQELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFQKYRRLVP 288

Query: 917 KGHPYARYFEDNMIATK 967
           KGHPYARYF+DNMIAT+
Sbjct: 289 KGHPYARYFDDNMIATR 305


>ref|XP_002322830.1| predicted protein [Populus trichocarpa] gi|222867460|gb|EEF04591.1|
            predicted protein [Populus trichocarpa]
          Length = 340

 Score =  287 bits (734), Expect = 5e-75
 Identities = 165/342 (48%), Positives = 222/342 (64%), Gaps = 18/342 (5%)
 Frame = +2

Query: 29   MESMARISQKNPLINLTTQNTLPLFPKPI-SFTFKP----FTKPLKLTSTYHHPQ----- 178
            MES+A++  ++   NL+     P FPKPI S +FK      + P KL+ST          
Sbjct: 1    MESVAKLHCRHQPFNLSLNPHRPSFPKPIISLSFKTPPPSSSSPFKLSSTSIRASSSSSS 60

Query: 179  ----IPKNPFSSFLKTTCITLVTST-LFITQFNNKPSLAAQ-TQPPLVETTKEESVD--T 334
                + KN   + +K T ITL  +  LF T+ N KP++A+  T    V+ T+E S +  +
Sbjct: 61   RITPLNKN-LGTIIKITSITLTAAAALFFTRLNIKPAIASPLTASSTVDPTEESSKENVS 119

Query: 335  DEDKERVFEEYLDTHPDDLKALKGLMEVKIKTRKFEEAIAVIDRLIGIQPFEKEWVLLKA 514
             E++ER  ++YL  +P+D++AL+ LMEV+IK++K  EAI V+DRLI ++P E EW LLK+
Sbjct: 120  YEEQERALQDYLSQNPNDIEALRSLMEVRIKSKKLVEAIEVVDRLIELEPNEDEWPLLKS 179

Query: 515  HVYSYSGDIEMAKFAFEQLLGEDPLFVEAYHGLVMVTSQLGEGELEDVMKKIESAIXXXX 694
             +Y+YSGD E AK  FE +L +DPL VEAYHGLVM  S+ G G LE V+K+IESA+    
Sbjct: 180  QIYTYSGDFESAKDGFEAILKKDPLRVEAYHGLVMANSESG-GSLEVVLKRIESAMDKCK 238

Query: 695  XXXXXXXXXXXXXXVAQVRVVEGKYTDALKVYEELVKDEPRDFRPYLCQGIIYTLLKRTD 874
                          VAQVRV+E KY DALKVYEELVK+EPRDFRPYLCQGIIYTLL++ D
Sbjct: 239  KEKKTSDLRDFKLLVAQVRVMEEKYLDALKVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 298

Query: 875  EAEKQFQKYRRLVPKGHPYARYFEDNMIATKIFSQMAGNQRT 1000
            EAEK+F+++++LVPK HPY  Y  DNM ATK FS     +R+
Sbjct: 299  EAEKKFEQFKKLVPKNHPYREYLVDNMFATKFFSDKVERERS 340


>ref|XP_002308480.1| predicted protein [Populus trichocarpa] gi|222854456|gb|EEE92003.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  282 bits (721), Expect = 2e-73
 Identities = 161/333 (48%), Positives = 219/333 (65%), Gaps = 16/333 (4%)
 Frame = +2

Query: 29  MESMARISQKNPLINLTTQNTLPLFPKPI-SFTFK---PFTKPLKLTSTYHHPQIPK--- 187
           MES+A    K PL NL+     P FP PI S TFK   P + P KL+++       +   
Sbjct: 1   MESIA----KQPL-NLSLNPHRPSFPNPIVSLTFKTPPPSSSPFKLSTSIRASSSSRITP 55

Query: 188 --NPFSSFLKTTCITLVTST-LFITQFNNKPSLAA------QTQPPLVETTKEESVDTDE 340
                ++ +KTT ITL  +  LF T+FN+KP++A+       T  P  E++KE    + E
Sbjct: 56  LNQSLTTIIKTTSITLTAAAVLFFTRFNSKPAIASPVAASSSTADPTKESSKENV--SFE 113

Query: 341 DKERVFEEYLDTHPDDLKALKGLMEVKIKTRKFEEAIAVIDRLIGIQPFEKEWVLLKAHV 520
           ++ER  +++L  +P D++AL+ LMEV+IK++K +EAI V+DRLI ++P E EW LLK+ +
Sbjct: 114 EQERALQDHLAQNPSDVEALRSLMEVRIKSKKLQEAIEVVDRLIELEPNEDEWPLLKSQI 173

Query: 521 YSYSGDIEMAKFAFEQLLGEDPLFVEAYHGLVMVTSQLGEGELEDVMKKIESAIXXXXXX 700
           Y+YSGD E AK  FE +L +DPL VEAYHGLVM  S+ G G LE V+K+IESA+      
Sbjct: 174 YTYSGDFESAKDGFEAVLQKDPLRVEAYHGLVMANSESG-GSLEVVLKRIESAMNKCKKE 232

Query: 701 XXXXXXXXXXXXVAQVRVVEGKYTDALKVYEELVKDEPRDFRPYLCQGIIYTLLKRTDEA 880
                       +AQVRV+E KY DALKVYEELVK+EPRDFRPYLCQG+IYTLL++ DEA
Sbjct: 233 KKNSDLRDFKLLIAQVRVMEEKYFDALKVYEELVKEEPRDFRPYLCQGMIYTLLRKKDEA 292

Query: 881 EKQFQKYRRLVPKGHPYARYFEDNMIATKIFSQ 979
           EK+F+++++LVPK HPY  Y  +NM AT  FS+
Sbjct: 293 EKKFEQFKKLVPKNHPYREYLVENMFATNFFSE 325


>ref|XP_002881505.1| hypothetical protein ARALYDRAFT_482732 [Arabidopsis lyrata subsp.
            lyrata] gi|297327344|gb|EFH57764.1| hypothetical protein
            ARALYDRAFT_482732 [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score =  281 bits (718), Expect = 3e-73
 Identities = 157/335 (46%), Positives = 217/335 (64%), Gaps = 10/335 (2%)
 Frame = +2

Query: 29   MESMARISQKNPLINLTTQNTLPLFPK-PISFTFKPF---TKPLKLTSTYHHPQIPKNPF 196
            MES+ ++       +L+  +    FPK P SF+ +     T  LK  S        ++  
Sbjct: 1    MESLGKLHLHQQPNHLSFTHFSSSFPKTPSSFSLRSLPKSTSSLKCVSIKASSSKSQDSR 60

Query: 197  SSFLKTTCITLVTST-LFITQFNNKPS---LAAQTQPPLVETTKEESVD--TDEDKERVF 358
             SFLK+TC+T   +  LF+     KPS    A     P VE+ K+ +    + E++ER  
Sbjct: 61   LSFLKSTCVTFTAAAALFLVNLQLKPSPAIAAPVAATPSVESLKQSNNGDVSLEEEERSL 120

Query: 359  EEYLDTHPDDLKALKGLMEVKIKTRKFEEAIAVIDRLIGIQPFEKEWVLLKAHVYSYSGD 538
            E++L +HP+D++AL+ LMEV+IK+RK  EAI +IDRLI ++P EKEW +LKA+++SYSGD
Sbjct: 121  EDHLASHPEDVEALRSLMEVRIKSRKLIEAIELIDRLIELEPEEKEWPILKANIFSYSGD 180

Query: 539  IEMAKFAFEQLLGEDPLFVEAYHGLVMVTSQLGEGELEDVMKKIESAIXXXXXXXXXXXX 718
            +E AK  FE++L +DPL V+AYHGLVM  S  G  +L  V ++IE A+            
Sbjct: 181  LESAKTGFEEILVKDPLRVDAYHGLVMAYSDSG-ADLNAVEERIEEAMVRCKKEKNRKDL 239

Query: 719  XXXXXXVAQVRVVEGKYTDALKVYEELVKDEPRDFRPYLCQGIIYTLLKRTDEAEKQFQK 898
                  VAQ+RV+EGK+ +ALK+YEELVK+EPRDFRPYLCQGIIYT+LK+ DEAEKQF+K
Sbjct: 240  RDFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDFRPYLCQGIIYTVLKKQDEAEKQFEK 299

Query: 899  YRRLVPKGHPYARYFEDNMIATKIFSQMAGNQRTG 1003
            +RRLVPK HPY  YF DNM+ATK+F++ A  +  G
Sbjct: 300  FRRLVPKNHPYREYFMDNMVATKLFAEKAQREMAG 334