BLASTX nr result

ID: Coptis21_contig00006760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006760
         (925 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274894.2| PREDICTED: vesicle-associated protein 1-2-li...   282   7e-74
ref|XP_002528929.1| vesicle-associated membrane protein, putativ...   280   3e-73
ref|XP_002304271.1| predicted protein [Populus trichocarpa] gi|2...   277   3e-72
ref|XP_002511657.1| vesicle-associated membrane protein, putativ...   275   1e-71
ref|XP_002326476.1| predicted protein [Populus trichocarpa] gi|2...   275   1e-71

>ref|XP_002274894.2| PREDICTED: vesicle-associated protein 1-2-like [Vitis vinifera]
           gi|296089208|emb|CBI38911.3| unnamed protein product
           [Vitis vinifera]
          Length = 239

 Score =  282 bits (722), Expect = 7e-74
 Identities = 139/209 (66%), Positives = 162/209 (77%)
 Frame = +1

Query: 1   ELLRVDPQELKFPLELKKQVSCSLQLSNSTENYIAFKVKTTNPKKYCVRPNTGIVLPRST 180
           ELL ++PQEL+FP EL+KQ+SCSLQLSN T+N++AFKVKTTNPKKYCVRPNTG+V+PRST
Sbjct: 5   ELLSIEPQELQFPFELRKQISCSLQLSNKTDNFVAFKVKTTNPKKYCVRPNTGVVMPRST 64

Query: 181 SDVVVTMQAQREAPPDLQCKDKFFLQSVIASLGTTPKDINADMFNKESGNLVEECKLRVI 360
            DV+VTMQAQRE P D+QCKDKF LQS IAS G T KDI +DMFNKE+GN VEECKLRV 
Sbjct: 65  CDVIVTMQAQRETPQDMQCKDKFLLQSAIASPGATAKDITSDMFNKEAGNRVEECKLRVA 124

Query: 361 YVSPPQPPSPVLXXXXXXXXXXXXXXXNGNFSTSDSAFVPRIYGDSQEQSSEENSLISKL 540
           YV PPQPPSPV                NGN + S+   V R Y + Q+ SSE  +LISKL
Sbjct: 125 YVPPPQPPSPVREGSEEGSSPRASVSDNGNINASEFTAVSRAYVEPQDNSSEARALISKL 184

Query: 541 TEEKTSAIQQANKLRQELELMKHESNKSR 627
           TEEK SAIQQ NKL+QELE ++ ESN+SR
Sbjct: 185 TEEKKSAIQQNNKLQQELEFLRRESNRSR 213


>ref|XP_002528929.1| vesicle-associated membrane protein, putative [Ricinus communis]
           gi|223531631|gb|EEF33458.1| vesicle-associated membrane
           protein, putative [Ricinus communis]
          Length = 240

 Score =  280 bits (716), Expect = 3e-73
 Identities = 144/236 (61%), Positives = 171/236 (72%), Gaps = 3/236 (1%)
 Frame = +1

Query: 1   ELLRVDPQELKFPLELKKQVSCSLQLSNSTENYIAFKVKTTNPKKYCVRPNTGIVLPRST 180
           ELL +DP ELKFP ELKKQ+SCSLQLSN T++Y+AFKVKTTNPKKYCVRPN GIVLPRST
Sbjct: 5   ELLSIDPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNAGIVLPRST 64

Query: 181 SDVVVTMQAQREAPPDLQCKDKFFLQSVIASLGTTPKDINADMFNKESGNLVEECKLRVI 360
            DV+VTMQAQ+EAPPDLQCKDKF LQSV    G + KDINA+MFNKE+G++VEECKLRV+
Sbjct: 65  CDVIVTMQAQKEAPPDLQCKDKFLLQSVKTHDGASAKDINAEMFNKEAGHVVEECKLRVL 124

Query: 361 YVSPPQPPSPVLXXXXXXXXXXXXXXXNGNFSTSDSAFVPRIYG---DSQEQSSEENSLI 531
           YVSPPQPPSPV                NGN + S+ +   + +G   ++Q++SSE  SLI
Sbjct: 125 YVSPPQPPSPVPEGSEEESSPRGSVSDNGNVTGSEFSNAAKAFGERFETQDKSSEAKSLI 184

Query: 532 SKLTEEKTSAIQQANKLRQELELMKHESNKSRXXXXXXXXXXXXXXXXXXXYILKK 699
           SKL EEK +AIQQ NKLRQELEL+K E NK+R                   Y++KK
Sbjct: 185 SKLNEEKNNAIQQNNKLRQELELLKREGNKNRAGVSFIFVIFVGLLGIILGYLMKK 240


>ref|XP_002304271.1| predicted protein [Populus trichocarpa] gi|222841703|gb|EEE79250.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  277 bits (708), Expect = 3e-72
 Identities = 145/239 (60%), Positives = 172/239 (71%), Gaps = 5/239 (2%)
 Frame = +1

Query: 1   ELLRVDPQELKFPLELKKQVSCSLQLSNSTENYIAFKVKTTNPKKYCVRPNTGIVLPRST 180
           ELL ++P ELKFP ELKKQ+SCSLQLSN T+NY+AFKVKTTNPKKYCVRPN GIVLPRST
Sbjct: 5   ELLGIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNAGIVLPRST 64

Query: 181 SDVVVTMQAQREAPPDLQCKDKFFLQSVIASLGTTPKDINADMFNKESGNLVEECKLRVI 360
            DV+VTMQAQ+EAP D+QCKDKF LQSV  + G T KDINA+MF+KE+G+ VEECKLRV+
Sbjct: 65  CDVIVTMQAQKEAPTDMQCKDKFLLQSVKTNDGVTAKDINAEMFSKEAGHHVEECKLRVL 124

Query: 361 YVSPPQPPSPVLXXXXXXXXXXXXXXXNGN-----FSTSDSAFVPRIYGDSQEQSSEENS 525
           YVSPPQPPSPV                NGN      ST+  AFV R+  + QE+S E  +
Sbjct: 125 YVSPPQPPSPVQEGSEEGSSPRGSVSDNGNVTGTDLSTATRAFVERL--EPQEKSLEARA 182

Query: 526 LISKLTEEKTSAIQQANKLRQELELMKHESNKSRXXXXXXXXXXXXXXXXXXXYILKKT 702
           LISKLT+EK +AIQQ NKLRQELEL++H+ NK+R                   Y++KKT
Sbjct: 183 LISKLTDEKNNAIQQNNKLRQELELLRHQGNKNRGGVSIMFVIFVGLLGIFLGYLVKKT 241


>ref|XP_002511657.1| vesicle-associated membrane protein, putative [Ricinus communis]
           gi|223548837|gb|EEF50326.1| vesicle-associated membrane
           protein, putative [Ricinus communis]
          Length = 241

 Score =  275 bits (703), Expect = 1e-71
 Identities = 140/237 (59%), Positives = 171/237 (72%), Gaps = 3/237 (1%)
 Frame = +1

Query: 1   ELLRVDPQELKFPLELKKQVSCSLQLSNSTENYIAFKVKTTNPKKYCVRPNTGIVLPRST 180
           ELL ++PQEL+FPLEL+KQ+SCSLQL N ++NY+AFKVKTTNPKKYCVRPNTG+VLPRST
Sbjct: 5   ELLTIEPQELQFPLELRKQISCSLQLLNKSDNYVAFKVKTTNPKKYCVRPNTGVVLPRST 64

Query: 181 SDVVVTMQAQREAPPDLQCKDKFFLQSVIASLGTTPKDINADMFNKESGNLVEECKLRVI 360
            DV+VTMQAQ+EAP D+QCKDKF LQSVIAS G T KDINA+MFNKE+G+ VEECKLRV+
Sbjct: 65  CDVIVTMQAQKEAPLDMQCKDKFLLQSVIASPGATAKDINAEMFNKEAGHQVEECKLRVV 124

Query: 361 YVSPPQPPSPVLXXXXXXXXXXXXXXXNGNFSTSDSAFVPRIYG---DSQEQSSEENSLI 531
           YV+PP PPSPV                NGN S S+   V + +    + Q+ S E  +LI
Sbjct: 125 YVAPPGPPSPVREGSEEGSSPRASVSDNGNLSASERTVVLKTFAERHEPQDNSIEARALI 184

Query: 532 SKLTEEKTSAIQQANKLRQELELMKHESNKSRXXXXXXXXXXXXXXXXXXXYILKKT 702
           SKLTEEK SAIQQ  KL+QELEL++H+S++SR                   YI+ +T
Sbjct: 185 SKLTEEKNSAIQQNKKLQQELELLRHQSSRSRSGISFVYVLLVGLLGVILGYIMNRT 241


>ref|XP_002326476.1| predicted protein [Populus trichocarpa] gi|222833798|gb|EEE72275.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  275 bits (702), Expect = 1e-71
 Identities = 143/239 (59%), Positives = 172/239 (71%), Gaps = 5/239 (2%)
 Frame = +1

Query: 1   ELLRVDPQELKFPLELKKQVSCSLQLSNSTENYIAFKVKTTNPKKYCVRPNTGIVLPRST 180
           ELL ++P ELKFP ELKKQ+SCSLQLSN T+NY+AFKVKTTNPKKYCVRPN GIVLPRST
Sbjct: 5   ELLGIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNAGIVLPRST 64

Query: 181 SDVVVTMQAQREAPPDLQCKDKFFLQSVIASLGTTPKDINADMFNKESGNLVEECKLRVI 360
            DV+VTMQAQ+EAPPD+QCKDKF LQSV A+ G T KDINA+MF+KE+G++VEECKLRV+
Sbjct: 65  CDVIVTMQAQKEAPPDMQCKDKFLLQSVKANDGVTVKDINAEMFSKEAGHVVEECKLRVL 124

Query: 361 YVSPPQPPSPVLXXXXXXXXXXXXXXXNGN-----FSTSDSAFVPRIYGDSQEQSSEENS 525
           YVSPPQPPSPVL               NGN      ST   AFV  +  + Q++  E  +
Sbjct: 125 YVSPPQPPSPVLEGSEEGSPPWGSVSDNGNVNGTDLSTGTRAFVEHL--EPQDKPLEAGA 182

Query: 526 LISKLTEEKTSAIQQANKLRQELELMKHESNKSRXXXXXXXXXXXXXXXXXXXYILKKT 702
           LISKLT+E+ +AIQQ NKLRQELEL++ + NK+R                   Y++KKT
Sbjct: 183 LISKLTDERNNAIQQNNKLRQELELLRCQGNKNRSGASLMFVIIIGLLGLLLGYLMKKT 241


Top