BLASTX nr result

ID: Coptis21_contig00006748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006748
         (1636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284849.1| PREDICTED: nucleolar GTP-binding protein 2-l...   772   0.0  
emb|CAN68109.1| hypothetical protein VITISV_000763 [Vitis vinifera]   771   0.0  
ref|XP_004142347.1| PREDICTED: nucleolar GTP-binding protein 2-l...   761   0.0  
ref|XP_004159067.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar GT...   759   0.0  
ref|XP_003540457.1| PREDICTED: nucleolar GTP-binding protein 2-l...   752   0.0  

>ref|XP_002284849.1| PREDICTED: nucleolar GTP-binding protein 2-like [Vitis vinifera]
          Length = 530

 Score =  772 bits (1993), Expect = 0.0
 Identities = 390/517 (75%), Positives = 430/517 (83%), Gaps = 1/517 (0%)
 Frame = -1

Query: 1636 KVNVSGKPKHSLDVNRKDGKNDTRSASTIRRLKMYNTRPKRDAKGKILKYDLQSRELPST 1457
            KVNVSGKPKHSLDVNR +G  + RSA+T+RRLKMYNTRPKRD KGKILK++LQS+ELPST
Sbjct: 8    KVNVSGKPKHSLDVNRGNGDKEGRSAATVRRLKMYNTRPKRDRKGKILKHELQSKELPST 67

Query: 1456 RIKPDRQWFGNTRVVGQKELEIFREELENRMSSNYNVILKGRTLPLSLLNDHQKQARAHL 1277
            RI+PDR+WFGNTRVV QKELE FREEL++RMSS+YNVILK + LP+SLLNDHQKQAR HL
Sbjct: 68   RIQPDRRWFGNTRVVNQKELEFFREELQSRMSSSYNVILKEKKLPMSLLNDHQKQARVHL 127

Query: 1276 LDTESFQDAFGXXXXXXXXRLLAADYEALVKKADGSQDAFDEKILANPIVEGSEEDGLRD 1097
            LDTE F+DAFG        +L+A DYE+LVKKADGSQDAF++K   +   EGSE DG RD
Sbjct: 128  LDTEPFEDAFGPKKKRIRPKLMAMDYESLVKKADGSQDAFEQKHAGSAYAEGSEGDGFRD 187

Query: 1096 LVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYXXXXXXXXXXXXXHMV 917
            LVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCY             HM+
Sbjct: 188  LVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKEHCKHKHMI 247

Query: 916  FLLNKCDLVPAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFARLKSDKQAI 737
             LLNKCDL+PAWATKGWLRVLSKE+PTLAFHASINKSFGKGSLLSVLRQFARLKSDKQAI
Sbjct: 248  LLLNKCDLIPAWATKGWLRVLSKEFPTLAFHASINKSFGKGSLLSVLRQFARLKSDKQAI 307

Query: 736  SVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQNSD 557
            SVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQNSD
Sbjct: 308  SVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQNSD 367

Query: 556  SETDIVLKGVVRVTNLEDASEHIGEVLKRVKKEHLQRAYKIKEWVDDEDFXXXXXXXXXX 377
            SETD+VLKGVVRVTNLEDASEHIGEVLKRVKKEHL+RAYKIK+W D+ DF          
Sbjct: 368  SETDVVLKGVVRVTNLEDASEHIGEVLKRVKKEHLERAYKIKDWDDENDFLVQLCKLTGK 427

Query: 376  XXXXGEPDFKTAAKMVLHDWQRGRIPFFVPPPKQEDG-HSEKPGVPSTSEDTVVXXXXXX 200
                GEPD  T AKMVLHDWQRGRIPFFVPPP+Q++G  S++P      +DT V      
Sbjct: 428  LLKGGEPDLMTVAKMVLHDWQRGRIPFFVPPPRQQEGDSSDEPSTLGVEKDTAVDDNQAS 487

Query: 199  XXXXXXANVISSQQLKHVPVQRDLFSKKELDGEKQVL 89
                  ANVISSQQ  +VPVQ+DLFS++EL+G+   L
Sbjct: 488  AAIRAIANVISSQQTMNVPVQKDLFSERELEGDNSEL 524


>emb|CAN68109.1| hypothetical protein VITISV_000763 [Vitis vinifera]
          Length = 530

 Score =  771 bits (1990), Expect = 0.0
 Identities = 390/517 (75%), Positives = 429/517 (82%), Gaps = 1/517 (0%)
 Frame = -1

Query: 1636 KVNVSGKPKHSLDVNRKDGKNDTRSASTIRRLKMYNTRPKRDAKGKILKYDLQSRELPST 1457
            KVNVSGKPKHSLDVNR +G  + RSA+T+RRLKMYNTRPKRD KGKILK++LQS+ELPST
Sbjct: 8    KVNVSGKPKHSLDVNRGNGDKEGRSAATVRRLKMYNTRPKRDRKGKILKHELQSKELPST 67

Query: 1456 RIKPDRQWFGNTRVVGQKELEIFREELENRMSSNYNVILKGRTLPLSLLNDHQKQARAHL 1277
            RI+PDR+WFGNTRVV QKELE FREEL +RMSS+YNVILK + LP+SLLNDHQKQAR HL
Sbjct: 68   RIQPDRRWFGNTRVVNQKELEFFREELXSRMSSSYNVILKEKKLPMSLLNDHQKQARVHL 127

Query: 1276 LDTESFQDAFGXXXXXXXXRLLAADYEALVKKADGSQDAFDEKILANPIVEGSEEDGLRD 1097
            LDTE F+DAFG        +L+A DYE+LVKKADGSQDAF++K   +   EGSE DG RD
Sbjct: 128  LDTEPFEDAFGPKKKRIRPKLMAMDYESLVKKADGSQDAFEQKHAGSAYAEGSEGDGFRD 187

Query: 1096 LVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYXXXXXXXXXXXXXHMV 917
            LVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCY             HM+
Sbjct: 188  LVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKEHCKHKHMI 247

Query: 916  FLLNKCDLVPAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFARLKSDKQAI 737
             LLNKCDL+PAWATKGWLRVLSKE+PTLAFHASINKSFGKGSLLSVLRQFARLKSDKQAI
Sbjct: 248  LLLNKCDLIPAWATKGWLRVLSKEFPTLAFHASINKSFGKGSLLSVLRQFARLKSDKQAI 307

Query: 736  SVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQNSD 557
            SVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQNSD
Sbjct: 308  SVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQNSD 367

Query: 556  SETDIVLKGVVRVTNLEDASEHIGEVLKRVKKEHLQRAYKIKEWVDDEDFXXXXXXXXXX 377
            SETD+VLKGVVRVTNLEDASEHIGEVLKRVKKEHL+RAYKIK+W D+ DF          
Sbjct: 368  SETDVVLKGVVRVTNLEDASEHIGEVLKRVKKEHLERAYKIKDWDDENDFLVQLCKLTGK 427

Query: 376  XXXXGEPDFKTAAKMVLHDWQRGRIPFFVPPPKQEDG-HSEKPGVPSTSEDTVVXXXXXX 200
                GEPD  T AKMVLHDWQRGRIPFFVPPP+Q++G  S++P      +DT V      
Sbjct: 428  LLKGGEPDLMTVAKMVLHDWQRGRIPFFVPPPRQQEGDSSDEPSTLGVEKDTAVDDNQAS 487

Query: 199  XXXXXXANVISSQQLKHVPVQRDLFSKKELDGEKQVL 89
                  ANVISSQQ  +VPVQ+DLFS++EL+G+   L
Sbjct: 488  AAIRAIANVISSQQTMNVPVQKDLFSERELEGDNSEL 524


>ref|XP_004142347.1| PREDICTED: nucleolar GTP-binding protein 2-like [Cucumis sativus]
          Length = 557

 Score =  761 bits (1965), Expect = 0.0
 Identities = 395/513 (76%), Positives = 422/513 (82%), Gaps = 1/513 (0%)
 Frame = -1

Query: 1636 KVNVSGKPKHSLDVNRKDGKNDT-RSASTIRRLKMYNTRPKRDAKGKILKYDLQSRELPS 1460
            KVNVSGKPKHSLDVNR + KN   R+A+T+RRLKMYNTRPKRD KGK+LK DLQS ELP 
Sbjct: 8    KVNVSGKPKHSLDVNRSNEKNKNGRTAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPD 67

Query: 1459 TRIKPDRQWFGNTRVVGQKELEIFREELENRMSSNYNVILKGRTLPLSLLNDHQKQARAH 1280
            TRI+PDR+WFGNTRVV QKELEIFREELE RMSS+YNVILK R LPLSLLNDHQKQ+R H
Sbjct: 68   TRIQPDRRWFGNTRVVNQKELEIFREELEKRMSSSYNVILKERKLPLSLLNDHQKQSRVH 127

Query: 1279 LLDTESFQDAFGXXXXXXXXRLLAADYEALVKKADGSQDAFDEKILANPIVEGSEEDGLR 1100
            LLDTE FQDAFG        +LLAADYE+L++KAD S D F+EK   N  VEGSEEDG R
Sbjct: 128  LLDTEPFQDAFGPKGKRKRPKLLAADYESLLQKADKSHDDFEEKYAENATVEGSEEDGFR 187

Query: 1099 DLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYXXXXXXXXXXXXXHM 920
            DLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCY             H+
Sbjct: 188  DLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERHLKEHCKHKHV 247

Query: 919  VFLLNKCDLVPAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFARLKSDKQA 740
            V LLNKCDL+PAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFARLKSDKQA
Sbjct: 248  VLLLNKCDLIPAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFARLKSDKQA 307

Query: 739  ISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQNS 560
            ISVGFVGYPNVGKSSVINTLRTK VCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQNS
Sbjct: 308  ISVGFVGYPNVGKSSVINTLRTKTVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQNS 367

Query: 559  DSETDIVLKGVVRVTNLEDASEHIGEVLKRVKKEHLQRAYKIKEWVDDEDFXXXXXXXXX 380
            D+ETDIVLKGVVRVTNLEDASEHIGEVLKRVKKEHL+RAYKIK W DD DF         
Sbjct: 368  DTETDIVLKGVVRVTNLEDASEHIGEVLKRVKKEHLERAYKIKNWEDDNDFLVQLCKLSG 427

Query: 379  XXXXXGEPDFKTAAKMVLHDWQRGRIPFFVPPPKQEDGHSEKPGVPSTSEDTVVXXXXXX 200
                 GEPD  TAAKMVLHDWQRG++PFFVPPP+ ED  SE+P      +D+ V      
Sbjct: 428  KLLKGGEPDLTTAAKMVLHDWQRGKLPFFVPPPRVED-ESEEPNY-CVDDDSGVDSNQAA 485

Query: 199  XXXXXXANVISSQQLKHVPVQRDLFSKKELDGE 101
                  ANVISSQQ + VPVQRDLFS+ EL+GE
Sbjct: 486  AAFKAIANVISSQQQRSVPVQRDLFSENELNGE 518


>ref|XP_004159067.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar GTP-binding protein 2-like
            [Cucumis sativus]
          Length = 557

 Score =  759 bits (1960), Expect = 0.0
 Identities = 394/513 (76%), Positives = 421/513 (82%), Gaps = 1/513 (0%)
 Frame = -1

Query: 1636 KVNVSGKPKHSLDVNRKDGKNDT-RSASTIRRLKMYNTRPKRDAKGKILKYDLQSRELPS 1460
            KVNVSGKPKHSLDVNR + KN   R+A+T+RRLKMYNTRPKRD KGK+LK DLQS ELP 
Sbjct: 8    KVNVSGKPKHSLDVNRSNEKNKNGRTAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPD 67

Query: 1459 TRIKPDRQWFGNTRVVGQKELEIFREELENRMSSNYNVILKGRTLPLSLLNDHQKQARAH 1280
            TRI+PDR+WFGNTRVV QKELEIFREELE RMSS+YNVILK R LPLSLLNDHQKQ+R H
Sbjct: 68   TRIQPDRRWFGNTRVVNQKELEIFREELEKRMSSSYNVILKERKLPLSLLNDHQKQSRVH 127

Query: 1279 LLDTESFQDAFGXXXXXXXXRLLAADYEALVKKADGSQDAFDEKILANPIVEGSEEDGLR 1100
            LLDTE FQDAFG        +LLAADYE+L++KAD S D F+EK   N  VEGSEEDG R
Sbjct: 128  LLDTEPFQDAFGPKGKRKRPKLLAADYESLLQKADKSHDDFEEKYAENATVEGSEEDGFR 187

Query: 1099 DLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYXXXXXXXXXXXXXHM 920
            DLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCY             H+
Sbjct: 188  DLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERHLKEHCKHKHV 247

Query: 919  VFLLNKCDLVPAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFARLKSDKQA 740
            V LLNKCDL+PAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFARLKSDKQA
Sbjct: 248  VLLLNKCDLIPAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFARLKSDKQA 307

Query: 739  ISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQNS 560
            ISVGFVGYPNVGKSSVINTLRTK VCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQNS
Sbjct: 308  ISVGFVGYPNVGKSSVINTLRTKTVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQNS 367

Query: 559  DSETDIVLKGVVRVTNLEDASEHIGEVLKRVKKEHLQRAYKIKEWVDDEDFXXXXXXXXX 380
            D+ETDIVLKGVVRVTNLEDASEHIGEVLKRVKKEHL+RAYKIK W DD DF         
Sbjct: 368  DTETDIVLKGVVRVTNLEDASEHIGEVLKRVKKEHLERAYKIKNWEDDNDFLVQLCKLSG 427

Query: 379  XXXXXGEPDFKTAAKMVLHDWQRGRIPFFVPPPKQEDGHSEKPGVPSTSEDTVVXXXXXX 200
                 GEPD  TA KMVLHDWQRG++PFFVPPP+ ED  SE+P      +D+ V      
Sbjct: 428  KLLKGGEPDLTTAXKMVLHDWQRGKLPFFVPPPRVED-ESEEPNY-CVDDDSGVDSNQAA 485

Query: 199  XXXXXXANVISSQQLKHVPVQRDLFSKKELDGE 101
                  ANVISSQQ + VPVQRDLFS+ EL+GE
Sbjct: 486  AAFKAIANVISSQQQRSVPVQRDLFSENELNGE 518


>ref|XP_003540457.1| PREDICTED: nucleolar GTP-binding protein 2-like [Glycine max]
          Length = 549

 Score =  752 bits (1942), Expect = 0.0
 Identities = 385/513 (75%), Positives = 423/513 (82%), Gaps = 1/513 (0%)
 Frame = -1

Query: 1636 KVNVSGKPKHSLDVNRK-DGKNDTRSASTIRRLKMYNTRPKRDAKGKILKYDLQSRELPS 1460
            KVNVSGKPKHSLDVNR  D K ++RSA+T+RRLKMYNTRP RD KGK++ ++LQS+ELPS
Sbjct: 8    KVNVSGKPKHSLDVNRSNDAKKESRSAATVRRLKMYNTRPVRDRKGKVVSHELQSKELPS 67

Query: 1459 TRIKPDRQWFGNTRVVGQKELEIFREELENRMSSNYNVILKGRTLPLSLLNDHQKQARAH 1280
            TRI+PDR+WFGNTRVV QKELE FREEL++RMSSNYNVILK + LPLSLLNDHQKQAR H
Sbjct: 68   TRIQPDRRWFGNTRVVNQKELEFFREELQSRMSSNYNVILKEKKLPLSLLNDHQKQARVH 127

Query: 1279 LLDTESFQDAFGXXXXXXXXRLLAADYEALVKKADGSQDAFDEKILANPIVEGSEEDGLR 1100
            LLD E FQDAFG         LLAADYE+L+KKADGSQDAF+EK  ++   E ++EDG R
Sbjct: 128  LLDREPFQDAFGPKTKRKRPILLAADYESLLKKADGSQDAFEEKYGSSVSAEANDEDGFR 187

Query: 1099 DLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYXXXXXXXXXXXXXHM 920
            DLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCY             HM
Sbjct: 188  DLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKENCKHKHM 247

Query: 919  VFLLNKCDLVPAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFARLKSDKQA 740
            V LLNKCDLVPAWATKGWLRVLSKE+PTLAFHA+INKSFGKGSLLSVLRQFARLK DKQA
Sbjct: 248  VLLLNKCDLVPAWATKGWLRVLSKEFPTLAFHANINKSFGKGSLLSVLRQFARLKRDKQA 307

Query: 739  ISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQNS 560
            ISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVY N+
Sbjct: 308  ISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYHNN 367

Query: 559  DSETDIVLKGVVRVTNLEDASEHIGEVLKRVKKEHLQRAYKIKEWVDDEDFXXXXXXXXX 380
            DSETD+VLKGVVRVTNL+DA++HIGEVLKRVKKEHL+RAYKIKEW D+ DF         
Sbjct: 368  DSETDVVLKGVVRVTNLKDAADHIGEVLKRVKKEHLERAYKIKEWDDENDFLLQLCKSTG 427

Query: 379  XXXXXGEPDFKTAAKMVLHDWQRGRIPFFVPPPKQEDGHSEKPGVPSTSEDTVVXXXXXX 200
                 GEPD  TAAKM+LHDWQRGRIPFFVPPP+QED  SE+P V     D  V      
Sbjct: 428  KLLKGGEPDLMTAAKMILHDWQRGRIPFFVPPPRQED-LSEEPNVNGVDLDDSVDGNEAS 486

Query: 199  XXXXXXANVISSQQLKHVPVQRDLFSKKELDGE 101
                  A+V+SSQQ  +VPVQ DL+S+KEL GE
Sbjct: 487  AAMKAIADVLSSQQQINVPVQNDLYSEKELKGE 519


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