BLASTX nr result
ID: Coptis21_contig00006727
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00006727
(994 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB41214.1| putative transcriptional coactivator [Brassica r... 137 3e-30
ref|XP_002266998.1| PREDICTED: RNA polymerase II transcriptional... 137 5e-30
emb|CAN65190.1| hypothetical protein VITISV_032101 [Vitis vinifera] 137 5e-30
emb|CBI34506.3| unnamed protein product [Vitis vinifera] 136 9e-30
ref|NP_192830.1| RNA polymerase II transcriptional coactivator K... 134 4e-29
>dbj|BAB41214.1| putative transcriptional coactivator [Brassica rapa]
Length = 165
Score = 137 bits (346), Expect = 3e-30
Identities = 64/85 (75%), Positives = 79/85 (92%)
Frame = +1
Query: 394 KKASVGDKEFDDDGDLIICRLSNKRRVTIQDFRGKTLVSIREYYEKEGKQLPSSKGISLT 573
++A G+KEFDDDGDLIICRLS+KRRVTIQ+FRGK+LVSIREYY+K+GK+LPSSKGISLT
Sbjct: 81 ERAKEGNKEFDDDGDLIICRLSDKRRVTIQEFRGKSLVSIREYYKKDGKELPSSKGISLT 140
Query: 574 AEQWSTFRKAVPTIEESIKKVESRL 648
EQWSTF+K +P IE ++KK+ESR+
Sbjct: 141 DEQWSTFKKNIPAIEAAVKKMESRV 165
Score = 64.3 bits (155), Expect = 4e-08
Identities = 32/52 (61%), Positives = 39/52 (75%)
Frame = +3
Query: 87 QITETVISILKNSDMNEMTEFKVRKMAGDKLGLDLSSPEPKKFVRQVVESFL 242
+I ETV ILK SDM EMTEFKVR +A ++LG+DLS K FVR +V+SFL
Sbjct: 8 KIEETVREILKESDMTEMTEFKVRNLASERLGIDLSDKSHKAFVRGIVKSFL 59
>ref|XP_002266998.1| PREDICTED: RNA polymerase II transcriptional coactivator KELP-like
[Vitis vinifera]
Length = 187
Score = 137 bits (344), Expect = 5e-30
Identities = 66/82 (80%), Positives = 76/82 (92%)
Frame = +1
Query: 403 SVGDKEFDDDGDLIICRLSNKRRVTIQDFRGKTLVSIREYYEKEGKQLPSSKGISLTAEQ 582
S G KE+DDDGDLIICRLS++RRVTIQDFRGKTLVSIRE+Y K+GK+LPSSKGISLTAEQ
Sbjct: 105 SSGVKEYDDDGDLIICRLSDRRRVTIQDFRGKTLVSIREFYRKDGKELPSSKGISLTAEQ 164
Query: 583 WSTFRKAVPTIEESIKKVESRL 648
WS F+K VP IEE+I+K+ESRL
Sbjct: 165 WSAFKKNVPAIEEAIQKMESRL 186
Score = 76.3 bits (186), Expect = 1e-11
Identities = 36/54 (66%), Positives = 49/54 (90%)
Frame = +3
Query: 87 QITETVISILKNSDMNEMTEFKVRKMAGDKLGLDLSSPEPKKFVRQVVESFLLS 248
+I +TV+ ILK++DM+EMTEFKVRK+A DKLG++LS+P+ K+FVRQVVE+FL S
Sbjct: 8 RIEKTVLEILKSADMDEMTEFKVRKLASDKLGINLSAPDYKRFVRQVVETFLQS 61
>emb|CAN65190.1| hypothetical protein VITISV_032101 [Vitis vinifera]
Length = 320
Score = 137 bits (344), Expect = 5e-30
Identities = 66/82 (80%), Positives = 76/82 (92%)
Frame = +1
Query: 403 SVGDKEFDDDGDLIICRLSNKRRVTIQDFRGKTLVSIREYYEKEGKQLPSSKGISLTAEQ 582
S G KE+DDDGDLIICRLS++RRVTIQDFRGKTLVSIRE+Y K+GK+LPSSKGISLTAEQ
Sbjct: 183 SSGVKEYDDDGDLIICRLSDRRRVTIQDFRGKTLVSIREFYRKDGKELPSSKGISLTAEQ 242
Query: 583 WSTFRKAVPTIEESIKKVESRL 648
WS F+K VP IEE+I+K+ESRL
Sbjct: 243 WSAFKKNVPAIEEAIQKMESRL 264
Score = 76.3 bits (186), Expect = 1e-11
Identities = 36/54 (66%), Positives = 49/54 (90%)
Frame = +3
Query: 87 QITETVISILKNSDMNEMTEFKVRKMAGDKLGLDLSSPEPKKFVRQVVESFLLS 248
+I +TV+ ILK++DM+EMTEFKVRK+A DKLG++LS+P+ K+FVRQVVE+FL S
Sbjct: 86 RIEKTVLEILKSADMDEMTEFKVRKLASDKLGINLSAPDYKRFVRQVVETFLQS 139
>emb|CBI34506.3| unnamed protein product [Vitis vinifera]
Length = 142
Score = 136 bits (342), Expect = 9e-30
Identities = 65/80 (81%), Positives = 75/80 (93%)
Frame = +1
Query: 409 GDKEFDDDGDLIICRLSNKRRVTIQDFRGKTLVSIREYYEKEGKQLPSSKGISLTAEQWS 588
G KE+DDDGDLIICRLS++RRVTIQDFRGKTLVSIRE+Y K+GK+LPSSKGISLTAEQWS
Sbjct: 62 GVKEYDDDGDLIICRLSDRRRVTIQDFRGKTLVSIREFYRKDGKELPSSKGISLTAEQWS 121
Query: 589 TFRKAVPTIEESIKKVESRL 648
F+K VP IEE+I+K+ESRL
Sbjct: 122 AFKKNVPAIEEAIQKMESRL 141
Score = 75.9 bits (185), Expect = 1e-11
Identities = 36/54 (66%), Positives = 49/54 (90%)
Frame = +3
Query: 87 QITETVISILKNSDMNEMTEFKVRKMAGDKLGLDLSSPEPKKFVRQVVESFLLS 248
+I +TV+ ILK++DM+EMTEFKVRK+A DKLG++LS+P+ K+FVRQVVE+FL S
Sbjct: 8 RIEKTVLEILKSADMDEMTEFKVRKLASDKLGINLSAPDYKRFVRQVVETFLHS 61
>ref|NP_192830.1| RNA polymerase II transcriptional coactivator KELP [Arabidopsis
thaliana] gi|145333013|ref|NP_001078372.1| RNA
polymerase II transcriptional coactivator KELP
[Arabidopsis thaliana]
gi|37079408|sp|O65155.1|KELP_ARATH RecName: Full=RNA
polymerase II transcriptional coactivator KELP
gi|2997686|gb|AAC08575.1| putative transcriptional
co-activator [Arabidopsis thaliana]
gi|3513735|gb|AAC33951.1| contains similarity to RNA
polymerase II transcription cofactor p15 [Arabidopsis
thaliana] gi|4539366|emb|CAB40060.1| putative protein
[Arabidopsis thaliana] gi|7267790|emb|CAB81193.1|
putative protein [Arabidopsis thaliana]
gi|21554027|gb|AAM63108.1| putative transcriptional
coactivator [Arabidopsis thaliana]
gi|29028806|gb|AAO64782.1| At4g10920 [Arabidopsis
thaliana] gi|110736559|dbj|BAF00245.1| hypothetical
protein [Arabidopsis thaliana]
gi|110738319|dbj|BAF01087.1| hypothetical protein
[Arabidopsis thaliana] gi|332657543|gb|AEE82943.1| RNA
polymerase II transcriptional coactivator KELP
[Arabidopsis thaliana] gi|332657544|gb|AEE82944.1| RNA
polymerase II transcriptional coactivator KELP
[Arabidopsis thaliana]
Length = 165
Score = 134 bits (336), Expect = 4e-29
Identities = 62/85 (72%), Positives = 77/85 (90%)
Frame = +1
Query: 394 KKASVGDKEFDDDGDLIICRLSNKRRVTIQDFRGKTLVSIREYYEKEGKQLPSSKGISLT 573
K G+KEFDDDGDLIICRLS+KRRVTIQ+F+GK+LVSIREYY+K+GK+LP+SKGISLT
Sbjct: 81 KDCGKGNKEFDDDGDLIICRLSDKRRVTIQEFKGKSLVSIREYYKKDGKELPTSKGISLT 140
Query: 574 AEQWSTFRKAVPTIEESIKKVESRL 648
EQWSTF+K +P IE ++KK+ESR+
Sbjct: 141 DEQWSTFKKNMPAIENAVKKMESRV 165
Score = 63.9 bits (154), Expect = 6e-08
Identities = 32/52 (61%), Positives = 38/52 (73%)
Frame = +3
Query: 87 QITETVISILKNSDMNEMTEFKVRKMAGDKLGLDLSSPEPKKFVRQVVESFL 242
+I +TVI IL SDM E+TEFKVRK+A +KL +DLS K FVR VVE FL
Sbjct: 8 KIEKTVIEILSESDMKEITEFKVRKLASEKLAIDLSEKSHKAFVRSVVEKFL 59