BLASTX nr result

ID: Coptis21_contig00006706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006706
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263793.1| PREDICTED: nuclear transcription factor Y su...    83   2e-14
emb|CBI39143.3| unnamed protein product [Vitis vinifera]               81   1e-13
ref|XP_002524073.1| transcription factor, putative [Ricinus comm...    68   9e-10
ref|XP_003519110.1| PREDICTED: nuclear transcription factor Y su...    62   4e-08
gb|AFK37452.1| unknown [Lotus japonicus]                               60   2e-07

>ref|XP_002263793.1| PREDICTED: nuclear transcription factor Y subunit A-10-like [Vitis
           vinifera]
          Length = 330

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 41/77 (53%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
 Frame = +1

Query: 73  VTMQTVCFKDHGGLFHNPIVQQLPLPSVPWWSGLGSQAVYGESFVQLKSVSEDHPTGGNQ 252
           +TMQT  FK+H G  HNP  Q     +VPWWSGLGSQ+VY ESF QLKS+S +HP  G+Q
Sbjct: 1   MTMQTTYFKEHAGSAHNPTGQLSSAAAVPWWSGLGSQSVYDESFAQLKSLSMEHPGKGDQ 60

Query: 253 FTVVARHE---SRGTDQ 294
            T + + E     GTD+
Sbjct: 61  LTAIKQVELGAEDGTDK 77


>emb|CBI39143.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
 Frame = +1

Query: 79  MQTVCFKDHGGLFHNPIVQQLPLPSVPWWSGLGSQAVYGESFVQLKSVSEDHPTGGNQFT 258
           MQT  FK+H G  HNP  Q     +VPWWSGLGSQ+VY ESF QLKS+S +HP  G+Q T
Sbjct: 1   MQTTYFKEHAGSAHNPTGQLSSAAAVPWWSGLGSQSVYDESFAQLKSLSMEHPGKGDQLT 60

Query: 259 VVARHE---SRGTDQ 294
            + + E     GTD+
Sbjct: 61  AIKQVELGAEDGTDK 75


>ref|XP_002524073.1| transcription factor, putative [Ricinus communis]
           gi|223536641|gb|EEF38283.1| transcription factor,
           putative [Ricinus communis]
          Length = 314

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/64 (45%), Positives = 43/64 (67%)
 Frame = +1

Query: 73  VTMQTVCFKDHGGLFHNPIVQQLPLPSVPWWSGLGSQAVYGESFVQLKSVSEDHPTGGNQ 252
           + ++T+ FK+H G  HNPI Q   +PS+PWWS  G Q+VYGE +  LK  + ++P GG++
Sbjct: 1   MAVKTLYFKEHEGTVHNPIGQLSSVPSMPWWSSFGPQSVYGEPYDLLKPSTMENPIGGDR 60

Query: 253 FTVV 264
            T V
Sbjct: 61  VTAV 64


>ref|XP_003519110.1| PREDICTED: nuclear transcription factor Y subunit A-10-like
           [Glycine max]
          Length = 330

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/78 (42%), Positives = 46/78 (58%)
 Frame = +1

Query: 73  VTMQTVCFKDHGGLFHNPIVQQLPLPSVPWWSGLGSQAVYGESFVQLKSVSEDHPTGGNQ 252
           + MQTV  K+H GL H+ + Q   + S PWWS LGSQ VYGE   Q+KS S +     +Q
Sbjct: 1   MAMQTVYLKEHEGLVHSSVGQLSSVTSAPWWSALGSQPVYGEYCGQMKSFSLEISNYVDQ 60

Query: 253 FTVVARHESRGTDQVQEK 306
           F    +  +RG +Q+ +K
Sbjct: 61  FG-AGKQAARGVEQLLDK 77


>gb|AFK37452.1| unknown [Lotus japonicus]
          Length = 328

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/78 (41%), Positives = 42/78 (53%)
 Frame = +1

Query: 73  VTMQTVCFKDHGGLFHNPIVQQLPLPSVPWWSGLGSQAVYGESFVQLKSVSEDHPTGGNQ 252
           + MQT    +H G+ HN + Q     S PWWS  GSQAVYGES  Q+K  S + P   +Q
Sbjct: 1   MAMQTANLIEHEGIAHNFVGQLSSATSAPWWSAFGSQAVYGESCGQMKPFSLEPPISVDQ 60

Query: 253 FTVVARHESRGTDQVQEK 306
                +  +RG +QV  K
Sbjct: 61  L-AAGKQSARGAEQVLAK 77