BLASTX nr result
ID: Coptis21_contig00006706
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00006706 (314 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263793.1| PREDICTED: nuclear transcription factor Y su... 83 2e-14 emb|CBI39143.3| unnamed protein product [Vitis vinifera] 81 1e-13 ref|XP_002524073.1| transcription factor, putative [Ricinus comm... 68 9e-10 ref|XP_003519110.1| PREDICTED: nuclear transcription factor Y su... 62 4e-08 gb|AFK37452.1| unknown [Lotus japonicus] 60 2e-07 >ref|XP_002263793.1| PREDICTED: nuclear transcription factor Y subunit A-10-like [Vitis vinifera] Length = 330 Score = 83.2 bits (204), Expect = 2e-14 Identities = 41/77 (53%), Positives = 51/77 (66%), Gaps = 3/77 (3%) Frame = +1 Query: 73 VTMQTVCFKDHGGLFHNPIVQQLPLPSVPWWSGLGSQAVYGESFVQLKSVSEDHPTGGNQ 252 +TMQT FK+H G HNP Q +VPWWSGLGSQ+VY ESF QLKS+S +HP G+Q Sbjct: 1 MTMQTTYFKEHAGSAHNPTGQLSSAAAVPWWSGLGSQSVYDESFAQLKSLSMEHPGKGDQ 60 Query: 253 FTVVARHE---SRGTDQ 294 T + + E GTD+ Sbjct: 61 LTAIKQVELGAEDGTDK 77 >emb|CBI39143.3| unnamed protein product [Vitis vinifera] Length = 309 Score = 80.9 bits (198), Expect = 1e-13 Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 3/75 (4%) Frame = +1 Query: 79 MQTVCFKDHGGLFHNPIVQQLPLPSVPWWSGLGSQAVYGESFVQLKSVSEDHPTGGNQFT 258 MQT FK+H G HNP Q +VPWWSGLGSQ+VY ESF QLKS+S +HP G+Q T Sbjct: 1 MQTTYFKEHAGSAHNPTGQLSSAAAVPWWSGLGSQSVYDESFAQLKSLSMEHPGKGDQLT 60 Query: 259 VVARHE---SRGTDQ 294 + + E GTD+ Sbjct: 61 AIKQVELGAEDGTDK 75 >ref|XP_002524073.1| transcription factor, putative [Ricinus communis] gi|223536641|gb|EEF38283.1| transcription factor, putative [Ricinus communis] Length = 314 Score = 67.8 bits (164), Expect = 9e-10 Identities = 29/64 (45%), Positives = 43/64 (67%) Frame = +1 Query: 73 VTMQTVCFKDHGGLFHNPIVQQLPLPSVPWWSGLGSQAVYGESFVQLKSVSEDHPTGGNQ 252 + ++T+ FK+H G HNPI Q +PS+PWWS G Q+VYGE + LK + ++P GG++ Sbjct: 1 MAVKTLYFKEHEGTVHNPIGQLSSVPSMPWWSSFGPQSVYGEPYDLLKPSTMENPIGGDR 60 Query: 253 FTVV 264 T V Sbjct: 61 VTAV 64 >ref|XP_003519110.1| PREDICTED: nuclear transcription factor Y subunit A-10-like [Glycine max] Length = 330 Score = 62.4 bits (150), Expect = 4e-08 Identities = 33/78 (42%), Positives = 46/78 (58%) Frame = +1 Query: 73 VTMQTVCFKDHGGLFHNPIVQQLPLPSVPWWSGLGSQAVYGESFVQLKSVSEDHPTGGNQ 252 + MQTV K+H GL H+ + Q + S PWWS LGSQ VYGE Q+KS S + +Q Sbjct: 1 MAMQTVYLKEHEGLVHSSVGQLSSVTSAPWWSALGSQPVYGEYCGQMKSFSLEISNYVDQ 60 Query: 253 FTVVARHESRGTDQVQEK 306 F + +RG +Q+ +K Sbjct: 61 FG-AGKQAARGVEQLLDK 77 >gb|AFK37452.1| unknown [Lotus japonicus] Length = 328 Score = 60.1 bits (144), Expect = 2e-07 Identities = 32/78 (41%), Positives = 42/78 (53%) Frame = +1 Query: 73 VTMQTVCFKDHGGLFHNPIVQQLPLPSVPWWSGLGSQAVYGESFVQLKSVSEDHPTGGNQ 252 + MQT +H G+ HN + Q S PWWS GSQAVYGES Q+K S + P +Q Sbjct: 1 MAMQTANLIEHEGIAHNFVGQLSSATSAPWWSAFGSQAVYGESCGQMKPFSLEPPISVDQ 60 Query: 253 FTVVARHESRGTDQVQEK 306 + +RG +QV K Sbjct: 61 L-AAGKQSARGAEQVLAK 77