BLASTX nr result

ID: Coptis21_contig00006685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006685
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39143.3| unnamed protein product [Vitis vinifera]              192   2e-47
ref|XP_002263793.1| PREDICTED: nuclear transcription factor Y su...   192   2e-47
ref|XP_003519110.1| PREDICTED: nuclear transcription factor Y su...   189   2e-46
gb|AFK37452.1| unknown [Lotus japonicus]                              189   3e-46
dbj|BAG50055.1| transcription factor CCAAT [Lotus japonicus]          189   3e-46

>emb|CBI39143.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  192 bits (488), Expect = 2e-47
 Identities = 93/144 (64%), Positives = 110/144 (76%), Gaps = 2/144 (1%)
 Frame = -3

Query: 431 NTSQFTIFPADSKDPGKEQKSQ--QASLARQSPQPGYQNCFELGLAQPMVCANYPYMDQF 258
           N++QFTIF  + K+    QK Q  QA+++ QS  P YQ  FELG  QPMVC  YPY DQ 
Sbjct: 77  NSTQFTIFSGECKNSEDAQKPQPLQATISMQSTIPEYQTRFELGFGQPMVCVKYPYADQC 136

Query: 257 YGVVATYRRPATGRIMLPLNVKSEDGPIFVNAKQYHGILRRRQSRAKAELENKLVKNRKP 78
           YGV + Y     GRIMLPL++ ++DGPI+VNAKQYHGI+RRRQSRAKAELENKL + RKP
Sbjct: 137 YGVFSAYGHQVMGRIMLPLSLTTDDGPIYVNAKQYHGIIRRRQSRAKAELENKLTRARKP 196

Query: 77  YLHESRHLHALRRARGCGGRFLTK 6
           Y+HESRHLHA+RR RGCGGRFL K
Sbjct: 197 YMHESRHLHAMRRPRGCGGRFLKK 220


>ref|XP_002263793.1| PREDICTED: nuclear transcription factor Y subunit A-10-like [Vitis
           vinifera]
          Length = 330

 Score =  192 bits (488), Expect = 2e-47
 Identities = 93/144 (64%), Positives = 110/144 (76%), Gaps = 2/144 (1%)
 Frame = -3

Query: 431 NTSQFTIFPADSKDPGKEQKSQ--QASLARQSPQPGYQNCFELGLAQPMVCANYPYMDQF 258
           N++QFTIF  + K+    QK Q  QA+++ QS  P YQ  FELG  QPMVC  YPY DQ 
Sbjct: 79  NSTQFTIFSGECKNSEDAQKPQPLQATISMQSTIPEYQTRFELGFGQPMVCVKYPYADQC 138

Query: 257 YGVVATYRRPATGRIMLPLNVKSEDGPIFVNAKQYHGILRRRQSRAKAELENKLVKNRKP 78
           YGV + Y     GRIMLPL++ ++DGPI+VNAKQYHGI+RRRQSRAKAELENKL + RKP
Sbjct: 139 YGVFSAYGHQVMGRIMLPLSLTTDDGPIYVNAKQYHGIIRRRQSRAKAELENKLTRARKP 198

Query: 77  YLHESRHLHALRRARGCGGRFLTK 6
           Y+HESRHLHA+RR RGCGGRFL K
Sbjct: 199 YMHESRHLHAMRRPRGCGGRFLKK 222


>ref|XP_003519110.1| PREDICTED: nuclear transcription factor Y subunit A-10-like
           [Glycine max]
          Length = 330

 Score =  189 bits (481), Expect = 2e-46
 Identities = 91/143 (63%), Positives = 111/143 (77%)
 Frame = -3

Query: 431 NTSQFTIFPADSKDPGKEQKSQQASLARQSPQPGYQNCFELGLAQPMVCANYPYMDQFYG 252
           +T+QFTIFP D K  G  Q + QA+L+ QS      N FE+G+ QPM+CA YPYMDQFYG
Sbjct: 79  HTTQFTIFPDDCKMSGDAQ-NPQATLSLQSSLAEPHNRFEIGVNQPMICAKYPYMDQFYG 137

Query: 251 VVATYRRPATGRIMLPLNVKSEDGPIFVNAKQYHGILRRRQSRAKAELENKLVKNRKPYL 72
           + + Y    +GRIMLP+N+ S++GP +VNAKQYHGI+RRRQSRAKA LENK++K RKPY+
Sbjct: 138 LFSAYGPQISGRIMLPINLTSDEGPTYVNAKQYHGIIRRRQSRAKAVLENKMIKRRKPYM 197

Query: 71  HESRHLHALRRARGCGGRFLTKK 3
           HESRHLHA RR RGCGGRFL  K
Sbjct: 198 HESRHLHATRRPRGCGGRFLNTK 220


>gb|AFK37452.1| unknown [Lotus japonicus]
          Length = 328

 Score =  189 bits (479), Expect = 3e-46
 Identities = 91/143 (63%), Positives = 108/143 (75%)
 Frame = -3

Query: 431 NTSQFTIFPADSKDPGKEQKSQQASLARQSPQPGYQNCFELGLAQPMVCANYPYMDQFYG 252
           +T+QFTIFP D K  G  QK Q     + SP   +   FELG +QPM+CA YPY DQFYG
Sbjct: 79  HTAQFTIFPDDCKVLGNAQKPQTTISLQSSPTDTHSR-FELGFSQPMICAKYPYTDQFYG 137

Query: 251 VVATYRRPATGRIMLPLNVKSEDGPIFVNAKQYHGILRRRQSRAKAELENKLVKNRKPYL 72
           + +TY    +GRIMLPLN+ +++GPI+VNAKQYHGI+RRRQSRAKA L+ K+ K RKPYL
Sbjct: 138 LFSTYGPQISGRIMLPLNMTTDEGPIYVNAKQYHGIIRRRQSRAKAVLDRKMTKRRKPYL 197

Query: 71  HESRHLHALRRARGCGGRFLTKK 3
           HESRHLHALRR RGCGGRFL  K
Sbjct: 198 HESRHLHALRRPRGCGGRFLNTK 220


>dbj|BAG50055.1| transcription factor CCAAT [Lotus japonicus]
          Length = 328

 Score =  189 bits (479), Expect = 3e-46
 Identities = 91/143 (63%), Positives = 108/143 (75%)
 Frame = -3

Query: 431 NTSQFTIFPADSKDPGKEQKSQQASLARQSPQPGYQNCFELGLAQPMVCANYPYMDQFYG 252
           +T+QFTIFP D K  G  QK Q     + SP   +   FELG +QPM+CA YPY DQFYG
Sbjct: 79  HTTQFTIFPDDCKVLGNAQKPQTTISLQSSPTDTHSR-FELGFSQPMICAKYPYTDQFYG 137

Query: 251 VVATYRRPATGRIMLPLNVKSEDGPIFVNAKQYHGILRRRQSRAKAELENKLVKNRKPYL 72
           + +TY    +GRIMLPLN+ +++GPI+VNAKQYHGI+RRRQSRAKA L+ K+ K RKPYL
Sbjct: 138 LFSTYGPQISGRIMLPLNLTTDEGPIYVNAKQYHGIIRRRQSRAKAVLDRKMTKRRKPYL 197

Query: 71  HESRHLHALRRARGCGGRFLTKK 3
           HESRHLHALRR RGCGGRFL  K
Sbjct: 198 HESRHLHALRRPRGCGGRFLNTK 220


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