BLASTX nr result
ID: Coptis21_contig00006682
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00006682
(1261 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002511999.1| RNA binding protein, putative [Ricinus commu... 555 e-156
ref|XP_002318558.1| predicted protein [Populus trichocarpa] gi|2... 548 e-153
emb|CBI15390.3| unnamed protein product [Vitis vinifera] 531 e-148
ref|XP_002271556.1| PREDICTED: G patch domain-containing protein... 531 e-148
ref|XP_004138338.1| PREDICTED: G patch domain-containing protein... 526 e-147
>ref|XP_002511999.1| RNA binding protein, putative [Ricinus communis]
gi|223549179|gb|EEF50668.1| RNA binding protein, putative
[Ricinus communis]
Length = 1000
Score = 555 bits (1430), Expect = e-156
Identities = 276/421 (65%), Positives = 330/421 (78%), Gaps = 2/421 (0%)
Frame = -3
Query: 1259 GQLRAVVPWQQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQTFTSSRKKRAETK 1080
G LR +VPW+QEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQ+FTSSRK RAE K
Sbjct: 34 GHLRTLVPWKQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQSFTSSRKNRAEVK 93
Query: 1079 EQSILNFLDDDEKAEMDGRSLATSALFDTFGFTAADVAQKQAEKEQLKRPSAIPGPVPDE 900
+Q+ILNFLDDDE+AE++ RSL TS+ FDTFGFTAA+ A+KQAEKEQ +RPSAIPGPVPDE
Sbjct: 94 QQNILNFLDDDERAELEDRSLGTSSQFDTFGFTAAEYARKQAEKEQQQRPSAIPGPVPDE 153
Query: 899 IVRPAANSIGMKLLLKMGWRHGHSIKDPRTNLPYDARREARKAFLAFSSDDAKPSLARFE 720
+V PA SIG+KLLLKMGWRHGHSI+ R N YDARREARKA LA SSDDA + E
Sbjct: 154 LVLPATESIGVKLLLKMGWRHGHSIRGSRANSLYDARREARKALLALSSDDANVHCIKSE 213
Query: 719 P--DEIASEGDNEQSTDDIASASKSTPVFVLNPKQDMHGLGFDPFKHAPEFRERKRLRVS 546
P D++ S G S +D S+STPVFVLNPKQD++GLG+DP+KHAPEFRE+KR RVS
Sbjct: 214 PGEDDLGSLG---LSVNDDVQTSRSTPVFVLNPKQDLYGLGYDPYKHAPEFREKKRSRVS 270
Query: 545 GNQQLGSGGVFPLKDDLFASKSGKIAPGFGIGXXXXXXXXXXDIYASGYNFEETYVQDIE 366
N++ G+ ++D LF KSGK APGFGIG D+Y + Y+FEET V+++E
Sbjct: 271 DNREPGNRKALLMRDGLFGFKSGKAAPGFGIGALEEYDAEDEDLYGTAYDFEETCVEEVE 330
Query: 365 EPSTINRDIKLIKSKDEEGALPGFKVASSSDFQLERFNPPVIPNDFKPLHKFSAALEVGK 186
EP+ I+ D K E+G LPGF+VAS+SD+QLERF+PPVIP DF P HKF +L+
Sbjct: 331 EPARISTDHKQKLVWKEQGVLPGFRVASNSDYQLERFDPPVIPKDFVPHHKFPGSLQADD 390
Query: 185 KLAGPPPPEVSPPWDKDRKLLIDGFAALVNRCGKLFEELSREKNKTNPLFSFLSGGDGHD 6
K PPPPEV PP D + KLLI+G A LV RCGKLFE+LSR+KN++NPLFSFL+GG+GH+
Sbjct: 391 KHTIPPPPEVPPPDDNNLKLLIEGVATLVARCGKLFEDLSRDKNQSNPLFSFLNGGNGHE 450
Query: 5 Y 3
Y
Sbjct: 451 Y 451
>ref|XP_002318558.1| predicted protein [Populus trichocarpa] gi|222859231|gb|EEE96778.1|
predicted protein [Populus trichocarpa]
Length = 965
Score = 548 bits (1412), Expect = e-153
Identities = 274/422 (64%), Positives = 324/422 (76%), Gaps = 3/422 (0%)
Frame = -3
Query: 1259 GQLRAVVPWQQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQTFTSSRKKRAETK 1080
G LR + W+QEVRDEEGRRRFHGAFTGG+SAGYYNT GSKEGWTPQ+FTSSRK RAE K
Sbjct: 34 GHLRTLPSWKQEVRDEEGRRRFHGAFTGGFSAGYYNTAGSKEGWTPQSFTSSRKNRAEFK 93
Query: 1079 EQSILNFLDDDEKAEMDGRSLATSALFDTFGFTAADVAQKQAEKEQLKRPSAIPGPVPDE 900
+QS+LNFLD+DEK E++GRSL T++ FDTFGFTAA++A+KQAEKEQ +RPSA+PGP PDE
Sbjct: 94 QQSMLNFLDEDEKEELEGRSLGTASQFDTFGFTAAEIARKQAEKEQQQRPSAVPGPAPDE 153
Query: 899 IVRPAANSIGMKLLLKMGWRHGHSIKDPRTNLPYDARREARKAFLAFSSDDAKPSLARFE 720
IV PA SIG+KLLLKMGWRHGHSIKD N Y ARREARKAFLAFSSDDAK E
Sbjct: 154 IVLPATESIGVKLLLKMGWRHGHSIKDSHANSLYKARREARKAFLAFSSDDAKSQPEDSE 213
Query: 719 PDEIASEGD-NEQSTDDIASASKSTPVFVLNPKQDMHGLGFDPFKHAPEFRERKRLRVSG 543
P E + + Q DD +S+STPV++LNPK+D HGLG+DP+KHAPEFRE+KR RVSG
Sbjct: 214 PGEEDHKSILDHQPIDDGFPSSQSTPVYILNPKEDTHGLGYDPYKHAPEFREKKRTRVSG 273
Query: 542 NQQLGSGGVFPLKDDLFASKSGKIAPGFGIGXXXXXXXXXXDIYASGYNFEETYVQDIEE 363
+ G+ +KD LF KSG+ APGFGIG D+YA+ Y+ E+TY+Q+ EE
Sbjct: 274 KRGSGNKQALSIKDSLFGLKSGRAAPGFGIGALEDYDAEDEDVYATAYDIEDTYIQEDEE 333
Query: 362 PSTINRDIKLIKSKDEEGALPGFKVASSSDFQLERFNPPVIPNDFKPLHKFSAALEVGKK 183
P N + K E+G LPGFKVAS+SD+QLERF+PPVIP DF P HKF LE KK
Sbjct: 334 PLRSNTENKPKLVWKEQGVLPGFKVASNSDYQLERFDPPVIPKDFLPHHKFPGPLEFDKK 393
Query: 182 LA--GPPPPEVSPPWDKDRKLLIDGFAALVNRCGKLFEELSREKNKTNPLFSFLSGGDGH 9
A PPPPEV PP D + K+LI+G A LV RCGKLFE+LSREKN++NPLFSFL+GG+GH
Sbjct: 394 PATLSPPPPEVPPPEDDNSKVLIEGVATLVARCGKLFEDLSREKNQSNPLFSFLTGGNGH 453
Query: 8 DY 3
DY
Sbjct: 454 DY 455
>emb|CBI15390.3| unnamed protein product [Vitis vinifera]
Length = 944
Score = 531 bits (1367), Expect = e-148
Identities = 271/420 (64%), Positives = 322/420 (76%), Gaps = 1/420 (0%)
Frame = -3
Query: 1259 GQLRAVVPWQQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQTFTSSRKKRAETK 1080
G LR++ PW+QEV DEEGRRRFHGAFTGG+SAG+YNTVGSKEGW PQ+FTSSRK RAE K
Sbjct: 34 GLLRSLPPWKQEVTDEEGRRRFHGAFTGGFSAGFYNTVGSKEGWAPQSFTSSRKNRAEVK 93
Query: 1079 EQSILNFLDDDEKAEMDGRSLATSALFDTFGFTAADVAQKQAEKEQLKRPSAIPGPVPDE 900
+QSI +FLDDDE AEM+G SL TS FDTFGFTAA++A+KQAEKEQ +RPSAIPGP+PDE
Sbjct: 94 KQSIFSFLDDDEIAEMEGHSLGTSLQFDTFGFTAAELARKQAEKEQQQRPSAIPGPLPDE 153
Query: 899 IVRPAANSIGMKLLLKMGWRHGHSIKDPRTNLPYDARREARKAFLAFSSDDAKPSLARFE 720
IV A SIG+KLLLKMGWR G+SIKD TN YDARREARKAFLA SSDD LA E
Sbjct: 154 IVLLATESIGVKLLLKMGWRRGNSIKDSHTNSLYDARREARKAFLALSSDDVSTDLAVSE 213
Query: 719 PDEIASEGDNEQSTDDIASASKSTPVFVLNPKQDMHGLGFDPFKHAPEFRERKRLRVSGN 540
+ + E +D +S+STPV+VLNPKQD+HGLG+DPFKHAPEFRE+KRLR+SG
Sbjct: 214 GVKSDLQNAIELPANDDLKSSESTPVYVLNPKQDLHGLGYDPFKHAPEFREKKRLRMSGK 273
Query: 539 QQLGSGGVFPLKDDLFASKSGKIAPGFGIGXXXXXXXXXXDIYASGYNFEETYVQDIEEP 360
++LG LK+DLFA KS K+APGFGIG D+YASGY+FE+ Y+Q++EEP
Sbjct: 274 KELG------LKNDLFAFKSRKVAPGFGIGALEELDVEDEDVYASGYDFEDNYIQEVEEP 327
Query: 359 STINRDIKLIKSKDEEGALPGFKVASSSDFQLERFNPPVIPNDFKPLHKFSAALEVGKKL 180
S + + K E+G L GFKVAS D+QLERF+PPV+P +F P HKF A L+ K
Sbjct: 328 SGLVIESKQKLGSKEKGVLSGFKVASKLDYQLERFDPPVVPKNFVPHHKFHAPLDDSNKH 387
Query: 179 AG-PPPPEVSPPWDKDRKLLIDGFAALVNRCGKLFEELSREKNKTNPLFSFLSGGDGHDY 3
G PPPPE P D + KLLI+G A LV RCGKLFE+LSREKN++NPLFSFL+GG+G DY
Sbjct: 388 DGDPPPPEAIAPEDNNLKLLIEGVATLVARCGKLFEDLSREKNQSNPLFSFLTGGNGCDY 447
>ref|XP_002271556.1| PREDICTED: G patch domain-containing protein 1-like [Vitis vinifera]
Length = 997
Score = 531 bits (1367), Expect = e-148
Identities = 271/420 (64%), Positives = 322/420 (76%), Gaps = 1/420 (0%)
Frame = -3
Query: 1259 GQLRAVVPWQQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQTFTSSRKKRAETK 1080
G LR++ PW+QEV DEEGRRRFHGAFTGG+SAG+YNTVGSKEGW PQ+FTSSRK RAE K
Sbjct: 34 GLLRSLPPWKQEVTDEEGRRRFHGAFTGGFSAGFYNTVGSKEGWAPQSFTSSRKNRAEVK 93
Query: 1079 EQSILNFLDDDEKAEMDGRSLATSALFDTFGFTAADVAQKQAEKEQLKRPSAIPGPVPDE 900
+QSI +FLDDDE AEM+G SL TS FDTFGFTAA++A+KQAEKEQ +RPSAIPGP+PDE
Sbjct: 94 KQSIFSFLDDDEIAEMEGHSLGTSLQFDTFGFTAAELARKQAEKEQQQRPSAIPGPLPDE 153
Query: 899 IVRPAANSIGMKLLLKMGWRHGHSIKDPRTNLPYDARREARKAFLAFSSDDAKPSLARFE 720
IV A SIG+KLLLKMGWR G+SIKD TN YDARREARKAFLA SSDD LA E
Sbjct: 154 IVLLATESIGVKLLLKMGWRRGNSIKDSHTNSLYDARREARKAFLALSSDDVSTDLAVSE 213
Query: 719 PDEIASEGDNEQSTDDIASASKSTPVFVLNPKQDMHGLGFDPFKHAPEFRERKRLRVSGN 540
+ + E +D +S+STPV+VLNPKQD+HGLG+DPFKHAPEFRE+KRLR+SG
Sbjct: 214 GVKSDLQNAIELPANDDLKSSESTPVYVLNPKQDLHGLGYDPFKHAPEFREKKRLRMSGK 273
Query: 539 QQLGSGGVFPLKDDLFASKSGKIAPGFGIGXXXXXXXXXXDIYASGYNFEETYVQDIEEP 360
++LG LK+DLFA KS K+APGFGIG D+YASGY+FE+ Y+Q++EEP
Sbjct: 274 KELG------LKNDLFAFKSRKVAPGFGIGALEELDVEDEDVYASGYDFEDNYIQEVEEP 327
Query: 359 STINRDIKLIKSKDEEGALPGFKVASSSDFQLERFNPPVIPNDFKPLHKFSAALEVGKKL 180
S + + K E+G L GFKVAS D+QLERF+PPV+P +F P HKF A L+ K
Sbjct: 328 SGLVIESKQKLGSKEKGVLSGFKVASKLDYQLERFDPPVVPKNFVPHHKFHAPLDDSNKH 387
Query: 179 AG-PPPPEVSPPWDKDRKLLIDGFAALVNRCGKLFEELSREKNKTNPLFSFLSGGDGHDY 3
G PPPPE P D + KLLI+G A LV RCGKLFE+LSREKN++NPLFSFL+GG+G DY
Sbjct: 388 DGDPPPPEAIAPEDNNLKLLIEGVATLVARCGKLFEDLSREKNQSNPLFSFLTGGNGCDY 447
>ref|XP_004138338.1| PREDICTED: G patch domain-containing protein 1-like [Cucumis sativus]
Length = 1001
Score = 526 bits (1354), Expect = e-147
Identities = 263/421 (62%), Positives = 322/421 (76%), Gaps = 2/421 (0%)
Frame = -3
Query: 1259 GQLRAVVPWQQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWTPQTFTSSRKKRAETK 1080
G +R + W+QEVRDEEGRRRFHGAFTGG+SAG+YNTVGSKEGWTPQ+FTSSRK RAE K
Sbjct: 34 GTMRTLPHWKQEVRDEEGRRRFHGAFTGGFSAGHYNTVGSKEGWTPQSFTSSRKNRAEVK 93
Query: 1079 EQSILNFLDDDEKAEMDGRSLATSALFDTFGFTAADVAQKQAEKEQLKRPSAIPGPVPDE 900
+Q+ILNFLD+DEKAE++GR L TSA FDTFGFTA ++A+KQA+KEQ +RPSAIPGPVPDE
Sbjct: 94 QQNILNFLDEDEKAELEGRGLGTSAQFDTFGFTAVELARKQADKEQQQRPSAIPGPVPDE 153
Query: 899 IVRPAANSIGMKLLLKMGWRHGHSIKDPRTNLPYDARREARKAFLAFSSDDAKPSLARFE 720
++ PAA SIG+KLLLKMGWRHG +IKD R N YDARR+ARKAFLAFS+ D K + E
Sbjct: 154 LIVPAAESIGVKLLLKMGWRHGRAIKDSRANSRYDARRDARKAFLAFSTGDVKSEIPNSE 213
Query: 719 PDEIASEGDNEQSTDDIASASKSTPVFVLNPKQDMHGLGFDPFKHAPEFRERKRLRVSGN 540
P + + + Q S+S+STPV+V+NPKQD+HGLGFDP+KHAPEF E+KR R +GN
Sbjct: 214 PFQEDDDIVSPQLAKGDVSSSQSTPVYVINPKQDLHGLGFDPYKHAPEFMEKKRARTAGN 273
Query: 539 QQLGSGGVFPLKDDLFASKSGKIAPGFGIGXXXXXXXXXXDIYASGYNFEETYVQDIEEP 360
Q+ G VF K++LF ++ +IA GFGIG D+Y SGY FEETYVQ+ +EP
Sbjct: 274 QE-GYKKVFSTKNNLFGFRTERIASGFGIGALEELDVEDEDVYTSGYEFEETYVQEEDEP 332
Query: 359 ST--INRDIKLIKSKDEEGALPGFKVASSSDFQLERFNPPVIPNDFKPLHKFSAALEVGK 186
+ I + + + EG L GF++AS SD+Q+ERF+PPVIP DF P HKF+ L G
Sbjct: 333 PSKMITDGKQKLIGRKVEGVLLGFRIASKSDYQMERFDPPVIPKDFIPHHKFAGPLIGGY 392
Query: 185 KLAGPPPPEVSPPWDKDRKLLIDGFAALVNRCGKLFEELSREKNKTNPLFSFLSGGDGHD 6
KLA PP EV PP D + KLLI+G A LV RCGKLFE+LSREKNK+NPLFSFL+GG G +
Sbjct: 393 KLADTPPVEVPPPEDNNLKLLIEGVATLVARCGKLFEDLSREKNKSNPLFSFLNGGTGQE 452
Query: 5 Y 3
Y
Sbjct: 453 Y 453