BLASTX nr result

ID: Coptis21_contig00006681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006681
         (1293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274829.2| PREDICTED: transcription factor ILR3-like [V...   325   1e-86
emb|CBI28976.3| unnamed protein product [Vitis vinifera]              313   6e-83
ref|XP_003527314.1| PREDICTED: transcription factor ILR3-like is...   310   5e-82
ref|XP_002522828.1| DNA binding protein, putative [Ricinus commu...   310   5e-82
gb|AFK48825.1| unknown [Lotus japonicus]                              309   1e-81

>ref|XP_002274829.2| PREDICTED: transcription factor ILR3-like [Vitis vinifera]
          Length = 240

 Score =  325 bits (834), Expect = 1e-86
 Identities = 167/234 (71%), Positives = 189/234 (80%), Gaps = 3/234 (1%)
 Frame = -3

Query: 1267 NSNWLNDYDLIMDGISVPVGDFIPP-PVTAFEWPSQPLNALSNV--EMDAPFGDTDGVKE 1097
            NSNWL DY L M+ I+VP G+F  P P T F WPSQ L + S+V  E D  FGD+DG+KE
Sbjct: 8    NSNWLFDYGL-MEDITVPGGEFPEPTPGTGFSWPSQALKSSSSVSLEADCSFGDSDGLKE 66

Query: 1096 TGSKKRARSEACSASGSKACREKMRRDKLNERFVELGSILEPGRPPKLDKAAILSDAVRM 917
             G +KR + E+C A+G+KACREK+RRD+LNERF+ELGSILEPGRPPK DKAAILSDAVRM
Sbjct: 67   LGPRKRLKHESCGATGTKACREKLRRDRLNERFLELGSILEPGRPPKTDKAAILSDAVRM 126

Query: 916  VSQLRGXXXXXXXXXXXXXXKIKELKSEKNELRDEKQRLKAEKEKLEQQVKAMSSQPSFM 737
            V+QLR               KIKELK+EKNELRDEKQRLKAEKEKLEQQVKA+S+QP F+
Sbjct: 127  VTQLRSEAQKLKESNGDLQEKIKELKAEKNELRDEKQRLKAEKEKLEQQVKAISAQPGFL 186

Query: 736  PHPSAIPTAFAPQAQAPGNKLMPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 575
            PHPSA+P AFA Q +APGNKLMPFIGYP VAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 187  PHPSAMPAAFAAQGRAPGNKLMPFIGYPSVAMWQFMPPAAVDTSQDHVLRPPVA 240


>emb|CBI28976.3| unnamed protein product [Vitis vinifera]
          Length = 223

 Score =  313 bits (802), Expect = 6e-83
 Identities = 159/223 (71%), Positives = 181/223 (81%), Gaps = 3/223 (1%)
 Frame = -3

Query: 1234 MDGISVPVGDFIPP-PVTAFEWPSQPLNALSNV--EMDAPFGDTDGVKETGSKKRARSEA 1064
            M+ I+VP G+F  P P T F WPSQ L + S+V  E D  FGD+DG+KE G +KR + E+
Sbjct: 1    MEDITVPGGEFPEPTPGTGFSWPSQALKSSSSVSLEADCSFGDSDGLKELGPRKRLKHES 60

Query: 1063 CSASGSKACREKMRRDKLNERFVELGSILEPGRPPKLDKAAILSDAVRMVSQLRGXXXXX 884
            C A+G+KACREK+RRD+LNERF+ELGSILEPGRPPK DKAAILSDAVRMV+QLR      
Sbjct: 61   CGATGTKACREKLRRDRLNERFLELGSILEPGRPPKTDKAAILSDAVRMVTQLRSEAQKL 120

Query: 883  XXXXXXXXXKIKELKSEKNELRDEKQRLKAEKEKLEQQVKAMSSQPSFMPHPSAIPTAFA 704
                     KIKELK+EKNELRDEKQRLKAEKEKLEQQVKA+S+QP F+PHPSA+P AFA
Sbjct: 121  KESNGDLQEKIKELKAEKNELRDEKQRLKAEKEKLEQQVKAISAQPGFLPHPSAMPAAFA 180

Query: 703  PQAQAPGNKLMPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 575
             Q +APGNKLMPFIGYP VAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 181  AQGRAPGNKLMPFIGYPSVAMWQFMPPAAVDTSQDHVLRPPVA 223


>ref|XP_003527314.1| PREDICTED: transcription factor ILR3-like isoform 1 [Glycine max]
          Length = 236

 Score =  310 bits (794), Expect = 5e-82
 Identities = 166/239 (69%), Positives = 189/239 (79%), Gaps = 2/239 (0%)
 Frame = -3

Query: 1285 MVSPENNSNWLNDYDLIMDGISVPVGDFIPPPVTAFEWPSQPLNALSNV--EMDAPFGDT 1112
            MVS EN +NWL DY LI D I VP   F     +AF WP   LNA SNV  E+D   GD+
Sbjct: 1    MVSREN-TNWLFDYGLI-DDIPVPDATF-GVNSSAFTWPPNALNASSNVGVEIDGSLGDS 57

Query: 1111 DGVKETGSKKRARSEACSASGSKACREKMRRDKLNERFVELGSILEPGRPPKLDKAAILS 932
            D +KE+GSKKR RSE+C+ASGSKACREK+RRD+LN++FVELG+ILEPGRP K DKAAIL 
Sbjct: 58   DSLKESGSKKRVRSESCAASGSKACREKLRRDRLNDKFVELGAILEPGRPAKTDKAAILI 117

Query: 931  DAVRMVSQLRGXXXXXXXXXXXXXXKIKELKSEKNELRDEKQRLKAEKEKLEQQVKAMSS 752
            DAVRMV+QLRG              KIKELK+EKNELRDEKQRLKAEKEKLEQQ+K++++
Sbjct: 118  DAVRMVTQLRGEAQKLKDTNQGLQEKIKELKAEKNELRDEKQRLKAEKEKLEQQLKSLNA 177

Query: 751  QPSFMPHPSAIPTAFAPQAQAPGNKLMPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 575
            QPSFMP P+A+P AFA Q QA GNKL+PFI YPGVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 178  QPSFMPPPAAMPAAFAAQGQAHGNKLVPFISYPGVAMWQFMPPAAVDTSQDHVLRPPVA 236


>ref|XP_002522828.1| DNA binding protein, putative [Ricinus communis]
            gi|223537912|gb|EEF39526.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 235

 Score =  310 bits (794), Expect = 5e-82
 Identities = 166/239 (69%), Positives = 188/239 (78%), Gaps = 2/239 (0%)
 Frame = -3

Query: 1285 MVSPENNSNWLNDYDLIMDGISVPVGDFIPPPVTAFEWPSQPLNALSNV--EMDAPFGDT 1112
            MVSPEN +NWL +Y LI D I VP  +F   PVT F WP Q LN  SNV  E+D  FG+ 
Sbjct: 1    MVSPEN-TNWLIEYGLI-DDIPVPDANF-SVPVTGFSWPVQTLNGSSNVSVEIDGSFGNA 57

Query: 1111 DGVKETGSKKRARSEACSASGSKACREKMRRDKLNERFVELGSILEPGRPPKLDKAAILS 932
            D  K++ SKKR RS++C AS SKACREK+RRD+LN++F+ELGSILEPGRPPK DKAAIL 
Sbjct: 58   DTQKDSTSKKRGRSDSC-ASSSKACREKLRRDRLNDKFLELGSILEPGRPPKTDKAAILI 116

Query: 931  DAVRMVSQLRGXXXXXXXXXXXXXXKIKELKSEKNELRDEKQRLKAEKEKLEQQVKAMSS 752
            DAVRMV+QLRG              KIKELK+EKNELRDEKQRLK EKEKLEQQ+KA+++
Sbjct: 117  DAVRMVTQLRGEAQKLKDSNSSLQEKIKELKAEKNELRDEKQRLKVEKEKLEQQLKAVNA 176

Query: 751  QPSFMPHPSAIPTAFAPQAQAPGNKLMPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 575
            QPSF+P P AIP  FA Q QAPGNKL+PFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 177  QPSFLPPPPAIPAPFAAQGQAPGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 235


>gb|AFK48825.1| unknown [Lotus japonicus]
          Length = 238

 Score =  309 bits (791), Expect = 1e-81
 Identities = 166/241 (68%), Positives = 187/241 (77%), Gaps = 4/241 (1%)
 Frame = -3

Query: 1285 MVSPENNSNWLNDYDLIMDGISVPVGDFIPPPVTAFEWPS-QPLNALSNV---EMDAPFG 1118
            MVS EN +NWL DY LI D I  P   F  PP + F WPS QPLN+ SNV   E+D   G
Sbjct: 1    MVSREN-TNWLFDYGLI-DDIPAPEVTFTVPP-SGFTWPSSQPLNSSSNVVGVEIDGSLG 57

Query: 1117 DTDGVKETGSKKRARSEACSASGSKACREKMRRDKLNERFVELGSILEPGRPPKLDKAAI 938
            D+D +KE GSKKR RSE+CSA+ SKACREK+RRDKLN++FVELGSILEPGRPPK DKAAI
Sbjct: 58   DSDSLKEPGSKKRVRSESCSATSSKACREKLRRDKLNDKFVELGSILEPGRPPKTDKAAI 117

Query: 937  LSDAVRMVSQLRGXXXXXXXXXXXXXXKIKELKSEKNELRDEKQRLKAEKEKLEQQVKAM 758
            L DAVRMV+QLRG              KIKELK+EKNELRDEKQRLK EKE+LEQQ+K+M
Sbjct: 118  LIDAVRMVTQLRGEAQKMKDTNMGLQEKIKELKTEKNELRDEKQRLKTEKERLEQQLKSM 177

Query: 757  SSQPSFMPHPSAIPTAFAPQAQAPGNKLMPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPV 578
            ++QPSFMP P A+P AFA Q QA GNKL+PFI YPGVAMWQF+PPAA DTSQDH LRPPV
Sbjct: 178  NAQPSFMPPPQALPAAFAAQGQAHGNKLVPFISYPGVAMWQFLPPAARDTSQDHELRPPV 237

Query: 577  A 575
            A
Sbjct: 238  A 238


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