BLASTX nr result

ID: Coptis21_contig00006666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006666
         (1478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517705.1| PREDICTED: eukaryotic translation initiation...   558   e-156
ref|XP_003534423.1| PREDICTED: eukaryotic translation initiation...   557   e-156
gb|AAK49947.1|AF335551_1 TGF-beta receptor-interacting protein 1...   557   e-156
ref|XP_003540532.1| PREDICTED: eukaryotic translation initiation...   556   e-156
ref|XP_004136687.1| PREDICTED: eukaryotic translation initiation...   556   e-156

>ref|XP_003517705.1| PREDICTED: eukaryotic translation initiation factor 3 subunit I-like
            [Glycine max]
          Length = 326

 Score =  558 bits (1439), Expect = e-156
 Identities = 265/326 (81%), Positives = 296/326 (90%)
 Frame = +1

Query: 82   MRPILMKGHERPLTYLVYNSEGDLLFSCGKDHNPNVWFADNGERLGTYIGHNGTVWCCDV 261
            MRPILMKGHERPLT+L YN +GDLLFSC KDHNP VWFADNGERLGTY GHNG VWCCDV
Sbjct: 1    MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWCCDV 60

Query: 262  SRDSKRLITGSADQTVKLWDVKNGSQLFTFNFGAPARSVDFGVGDGIAVMTTDMFMDHAP 441
            SRDS RLITGSADQT KLW+V+ G QLFTFNF +PARSVDF VGD +AV+TTD FM+   
Sbjct: 61   SRDSGRLITGSADQTAKLWNVQTGQQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELPS 120

Query: 442  AIHVKRIAQDPSEQSGKSVLEIKSPRGKINRAVFGPLNKTIISAGEDAVVRIWDTETGKL 621
            AIHVKRIA DP+EQ+G+SVL IK P+G+INRA++GPLN+TIISAGEDAV+RIWD+ETGKL
Sbjct: 121  AIHVKRIANDPAEQTGESVLLIKGPQGRINRAIWGPLNRTIISAGEDAVIRIWDSETGKL 180

Query: 622  IKESDKEAGHQKTITSLSKSKDESHFLTGSHDRSARLWDIRSLALIKTYVTESPVNAVDI 801
            +KESDKE+GH+KT+TSL+KS D SHFLTGS D+SARLWD R+L LIKTYVTE PVNAV +
Sbjct: 181  LKESDKESGHKKTVTSLAKSADGSHFLTGSLDKSARLWDTRTLTLIKTYVTERPVNAVAM 240

Query: 802  SPLLDHVVIGGGQDASSVTMTDRRAGKFEAKFFHKILQEEIGGVKGHFGPINALAFNPDG 981
            SPLLDHVV+GGGQDAS+VT TD RAGKFEAKF+ KILQEEIGGVKGHFGPINALAFNPDG
Sbjct: 241  SPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDG 300

Query: 982  RSFSSGGEDGYIRLHHFDPDYFNIKI 1059
            +SFSSGGEDGY+RLHHFDPDYFNIKI
Sbjct: 301  KSFSSGGEDGYVRLHHFDPDYFNIKI 326



 Score = 60.8 bits (146), Expect = 9e-07
 Identities = 49/189 (25%), Positives = 77/189 (40%), Gaps = 13/189 (6%)
 Frame = +1

Query: 70  QTTSMRPILMKGHERPLTYLVYNSEGDLLFSCGKDHNPNVWFADNGERL---GTYIGHNG 240
           + T    +L+KG +  +   ++      + S G+D    +W ++ G+ L       GH  
Sbjct: 133 EQTGESVLLIKGPQGRINRAIWGPLNRTIISAGEDAVIRIWDSETGKLLKESDKESGHKK 192

Query: 241 TVWCCDVSRDSKRLITGSADQTVKLWDVKNGSQLFTFNFGAPARSVDF----------GV 390
           TV     S D    +TGS D++ +LWD +  + + T+    P  +V            G 
Sbjct: 193 TVTSLAKSADGSHFLTGSLDKSARLWDTRTLTLIKTYVTERPVNAVAMSPLLDHVVLGGG 252

Query: 391 GDGIAVMTTDMFMDHAPAIHVKRIAQDPSEQSGKSVLEIKSPRGKINRAVFGPLNKTIIS 570
            D  AV TTD       A    +I Q+        +  +K   G IN   F P  K+  S
Sbjct: 253 QDASAVTTTDHRAGKFEAKFYDKILQE-------EIGGVKGHFGPINALAFNPDGKSFSS 305

Query: 571 AGEDAVVRI 597
            GED  VR+
Sbjct: 306 GGEDGYVRL 314


>ref|XP_003534423.1| PREDICTED: eukaryotic translation initiation factor 3 subunit I-like
            [Glycine max]
          Length = 326

 Score =  557 bits (1436), Expect = e-156
 Identities = 267/326 (81%), Positives = 295/326 (90%)
 Frame = +1

Query: 82   MRPILMKGHERPLTYLVYNSEGDLLFSCGKDHNPNVWFADNGERLGTYIGHNGTVWCCDV 261
            MRPILMKGHERPLT+L YN +GDLLFSC KDHNP VWFADNGERLGTY GHNG VW CDV
Sbjct: 1    MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWTCDV 60

Query: 262  SRDSKRLITGSADQTVKLWDVKNGSQLFTFNFGAPARSVDFGVGDGIAVMTTDMFMDHAP 441
            SRDS RLITGSADQT KLWDV++G QL+TFNF +PARSVDF VGD +AV+TTD FM+ + 
Sbjct: 61   SRDSVRLITGSADQTAKLWDVQSGLQLYTFNFDSPARSVDFSVGDRLAVITTDPFMELSS 120

Query: 442  AIHVKRIAQDPSEQSGKSVLEIKSPRGKINRAVFGPLNKTIISAGEDAVVRIWDTETGKL 621
            AIHVKRIA DP+EQSG+S+L IK P G+INRA++GPLN TIISAGEDAV+RIWD+ETGKL
Sbjct: 121  AIHVKRIADDPTEQSGESLLLIKGPLGRINRAIWGPLNSTIISAGEDAVIRIWDSETGKL 180

Query: 622  IKESDKEAGHQKTITSLSKSKDESHFLTGSHDRSARLWDIRSLALIKTYVTESPVNAVDI 801
            +KESDKE+GH+KT+TSL+KS D SHFLTGS D+SARLWD RSL LIKTYVTE PVNAV +
Sbjct: 181  LKESDKESGHKKTVTSLAKSADGSHFLTGSLDKSARLWDTRSLTLIKTYVTERPVNAVTM 240

Query: 802  SPLLDHVVIGGGQDASSVTMTDRRAGKFEAKFFHKILQEEIGGVKGHFGPINALAFNPDG 981
            SPLLDHVVIGGGQDAS+VT TD RAGKFEAKFF KILQEEIGGVKGHFGPINALAFNPDG
Sbjct: 241  SPLLDHVVIGGGQDASAVTTTDHRAGKFEAKFFDKILQEEIGGVKGHFGPINALAFNPDG 300

Query: 982  RSFSSGGEDGYIRLHHFDPDYFNIKI 1059
            +SFSSGGEDGY+RLHHFDPDYFNIKI
Sbjct: 301  KSFSSGGEDGYVRLHHFDPDYFNIKI 326


>gb|AAK49947.1|AF335551_1 TGF-beta receptor-interacting protein 1 [Phaseolus vulgaris]
          Length = 326

 Score =  557 bits (1436), Expect = e-156
 Identities = 265/326 (81%), Positives = 295/326 (90%)
 Frame = +1

Query: 82   MRPILMKGHERPLTYLVYNSEGDLLFSCGKDHNPNVWFADNGERLGTYIGHNGTVWCCDV 261
            MRPILMKGHERPLT+L YN +GDLLFSC KDHNP VWFADNGERLGTY GHNG VWCCDV
Sbjct: 1    MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWCCDV 60

Query: 262  SRDSKRLITGSADQTVKLWDVKNGSQLFTFNFGAPARSVDFGVGDGIAVMTTDMFMDHAP 441
            SRDS RLITGSADQT KLW+V+ G QLFTFNF +PARSVDF VGD +AV+TTD FM+   
Sbjct: 61   SRDSGRLITGSADQTAKLWNVQTGQQLFTFNFDSPARSVDFSVGDKLAVITTDPFMELPS 120

Query: 442  AIHVKRIAQDPSEQSGKSVLEIKSPRGKINRAVFGPLNKTIISAGEDAVVRIWDTETGKL 621
            AIHVKRIA DP+EQ+G SV+ IK P+G+INRA++GPLN+TIISAGEDAV+RIWD+ETGKL
Sbjct: 121  AIHVKRIANDPTEQTGDSVVLIKGPQGRINRAIWGPLNRTIISAGEDAVIRIWDSETGKL 180

Query: 622  IKESDKEAGHQKTITSLSKSKDESHFLTGSHDRSARLWDIRSLALIKTYVTESPVNAVDI 801
            IKESDKE+GH+KT+TSL+KS D SHFLTGS D+SARLWD R+L LIKTYVTE PVNAV +
Sbjct: 181  IKESDKESGHKKTVTSLAKSADGSHFLTGSLDKSARLWDTRTLTLIKTYVTERPVNAVAM 240

Query: 802  SPLLDHVVIGGGQDASSVTMTDRRAGKFEAKFFHKILQEEIGGVKGHFGPINALAFNPDG 981
            SPLLDHVV+GGGQDAS+VT TD RAGKFEAKF+ KILQEEIGGVKGHFGPINALAFNPDG
Sbjct: 241  SPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDG 300

Query: 982  RSFSSGGEDGYIRLHHFDPDYFNIKI 1059
            +SFSSGGEDGY+RLHHFDPDYFNIKI
Sbjct: 301  KSFSSGGEDGYVRLHHFDPDYFNIKI 326


>ref|XP_003540532.1| PREDICTED: eukaryotic translation initiation factor 3 subunit I-like
            [Glycine max] gi|255646294|gb|ACU23631.1| unknown
            [Glycine max]
          Length = 326

 Score =  556 bits (1434), Expect = e-156
 Identities = 266/326 (81%), Positives = 295/326 (90%)
 Frame = +1

Query: 82   MRPILMKGHERPLTYLVYNSEGDLLFSCGKDHNPNVWFADNGERLGTYIGHNGTVWCCDV 261
            MRPILMKGHERPLT+L YN +GDLLFSC KDHNP VWFADNGERLGTY GHNG VW CDV
Sbjct: 1    MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWTCDV 60

Query: 262  SRDSKRLITGSADQTVKLWDVKNGSQLFTFNFGAPARSVDFGVGDGIAVMTTDMFMDHAP 441
            SRDS RLITGSADQT KLWDV++G QL+TFNF +PARSVDF VGD +AV+TTD FM+   
Sbjct: 61   SRDSARLITGSADQTAKLWDVQSGLQLYTFNFDSPARSVDFSVGDKLAVITTDPFMELPS 120

Query: 442  AIHVKRIAQDPSEQSGKSVLEIKSPRGKINRAVFGPLNKTIISAGEDAVVRIWDTETGKL 621
            AIHVKRIA DPS+Q G+SVL IK P+G+INRA++GPLN TIISAGEDAV+RIWD+ETGKL
Sbjct: 121  AIHVKRIANDPSQQIGESVLLIKGPQGRINRAIWGPLNTTIISAGEDAVIRIWDSETGKL 180

Query: 622  IKESDKEAGHQKTITSLSKSKDESHFLTGSHDRSARLWDIRSLALIKTYVTESPVNAVDI 801
            ++ESDKE+GH+KT+TSL+KS D+SHFLTGS D+SARLWD RSL LIKTYVTE PVNAV +
Sbjct: 181  LQESDKESGHKKTVTSLAKSADDSHFLTGSLDKSARLWDTRSLTLIKTYVTERPVNAVTM 240

Query: 802  SPLLDHVVIGGGQDASSVTMTDRRAGKFEAKFFHKILQEEIGGVKGHFGPINALAFNPDG 981
            SPLLDHVVIGGGQDAS+VT TD RAGKFEAKFF KILQEEIGGVKGHFGPINALAFNPDG
Sbjct: 241  SPLLDHVVIGGGQDASAVTTTDHRAGKFEAKFFDKILQEEIGGVKGHFGPINALAFNPDG 300

Query: 982  RSFSSGGEDGYIRLHHFDPDYFNIKI 1059
            +SFSSGGEDGY+RLHHFDPDYFNIKI
Sbjct: 301  KSFSSGGEDGYVRLHHFDPDYFNIKI 326


>ref|XP_004136687.1| PREDICTED: eukaryotic translation initiation factor 3 subunit I-like
            [Cucumis sativus] gi|449494685|ref|XP_004159618.1|
            PREDICTED: eukaryotic translation initiation factor 3
            subunit I-like [Cucumis sativus]
          Length = 326

 Score =  556 bits (1432), Expect = e-156
 Identities = 263/326 (80%), Positives = 296/326 (90%)
 Frame = +1

Query: 82   MRPILMKGHERPLTYLVYNSEGDLLFSCGKDHNPNVWFADNGERLGTYIGHNGTVWCCDV 261
            MRPILMKGHERPLT+L YN +GDLLFSC KDHNP VW+ADNGERLGTY GHNG VWCCDV
Sbjct: 1    MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWYADNGERLGTYRGHNGAVWCCDV 60

Query: 262  SRDSKRLITGSADQTVKLWDVKNGSQLFTFNFGAPARSVDFGVGDGIAVMTTDMFMDHAP 441
            SRDS RLITGSADQT KLW+V+ G QLF+FNF +PAR+VDF VGD +AV+TTD FM+   
Sbjct: 61   SRDSMRLITGSADQTAKLWNVQTGQQLFSFNFDSPARAVDFSVGDKLAVITTDPFMELPS 120

Query: 442  AIHVKRIAQDPSEQSGKSVLEIKSPRGKINRAVFGPLNKTIISAGEDAVVRIWDTETGKL 621
            AIHVKRIA+DPSEQ+G+SVL +K P+G+INRAV+GPLNKTIISAGEDAVVRIWD+ETGKL
Sbjct: 121  AIHVKRIARDPSEQTGESVLLLKGPQGRINRAVWGPLNKTIISAGEDAVVRIWDSETGKL 180

Query: 622  IKESDKEAGHQKTITSLSKSKDESHFLTGSHDRSARLWDIRSLALIKTYVTESPVNAVDI 801
            +KESDKE GH+KT+TSL+KS D SHF+TGS D+SA+LWD R+L LIKTYVTE PVNAV +
Sbjct: 181  LKESDKEIGHKKTVTSLTKSSDGSHFITGSLDKSAKLWDTRTLTLIKTYVTERPVNAVTM 240

Query: 802  SPLLDHVVIGGGQDASSVTMTDRRAGKFEAKFFHKILQEEIGGVKGHFGPINALAFNPDG 981
            SPLLDHVV+GGGQDAS+VT TD RAGKFEAKF+ KILQEEIGGVKGHFGPINALAFNPDG
Sbjct: 241  SPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDG 300

Query: 982  RSFSSGGEDGYIRLHHFDPDYFNIKI 1059
            +SFSSGGEDGY+RLHHFDPDYFNIKI
Sbjct: 301  KSFSSGGEDGYVRLHHFDPDYFNIKI 326



 Score = 67.4 bits (163), Expect = 9e-09
 Identities = 53/189 (28%), Positives = 78/189 (41%), Gaps = 13/189 (6%)
 Frame = +1

Query: 70  QTTSMRPILMKGHERPLTYLVYNSEGDLLFSCGKDHNPNVWFADNGERL---GTYIGHNG 240
           + T    +L+KG +  +   V+      + S G+D    +W ++ G+ L      IGH  
Sbjct: 133 EQTGESVLLLKGPQGRINRAVWGPLNKTIISAGEDAVVRIWDSETGKLLKESDKEIGHKK 192

Query: 241 TVWCCDVSRDSKRLITGSADQTVKLWDVKNGSQLFTFNFGAPARSVDF----------GV 390
           TV     S D    ITGS D++ KLWD +  + + T+    P  +V            G 
Sbjct: 193 TVTSLTKSSDGSHFITGSLDKSAKLWDTRTLTLIKTYVTERPVNAVTMSPLLDHVVLGGG 252

Query: 391 GDGIAVMTTDMFMDHAPAIHVKRIAQDPSEQSGKSVLEIKSPRGKINRAVFGPLNKTIIS 570
            D  AV TTD       A    +I Q+        +  +K   G IN   F P  K+  S
Sbjct: 253 QDASAVTTTDHRAGKFEAKFYDKILQE-------EIGGVKGHFGPINALAFNPDGKSFSS 305

Query: 571 AGEDAVVRI 597
            GED  VR+
Sbjct: 306 GGEDGYVRL 314


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