BLASTX nr result

ID: Coptis21_contig00006661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00006661
         (1424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264154.1| PREDICTED: chaperone protein dnaJ 20, chloro...   154   5e-35
ref|XP_002518039.1| Chaperone protein dnaJ 20, chloroplast precu...   151   5e-34
ref|XP_002328862.1| predicted protein [Populus trichocarpa] gi|2...   147   5e-33
gb|ABK95188.1| unknown [Populus trichocarpa]                          147   5e-33
ref|XP_002300151.1| predicted protein [Populus trichocarpa] gi|1...   143   1e-31

>ref|XP_002264154.1| PREDICTED: chaperone protein dnaJ 20, chloroplastic [Vitis
           vinifera] gi|147777520|emb|CAN64811.1| hypothetical
           protein VITISV_024996 [Vitis vinifera]
           gi|298205225|emb|CBI17284.3| unnamed protein product
           [Vitis vinifera]
          Length = 216

 Score =  154 bits (389), Expect = 5e-35
 Identities = 73/107 (68%), Positives = 85/107 (79%)
 Frame = +3

Query: 303 SKYTRFRTKATVNDQVMVTESEARMSFYELLGISESGSYSDIKHAYKQLARKYHPDVSPP 482
           ++Y   +TKAT+ND+ +     A MSFYELLGI ESG+  +IK AYK LARKYHPDVSPP
Sbjct: 52  ARYASLKTKATINDEFLTEPEAAAMSFYELLGIPESGTLLEIKQAYKSLARKYHPDVSPP 111

Query: 483 ERTEEYTKRFILVQEAYETLSDPSRRAMYDHDMARGLHLAFSARKAY 623
            R +EYT+RFI VQEAYETLSDP RRA+YD D+A GLHLAFSARK Y
Sbjct: 112 GRVKEYTRRFIWVQEAYETLSDPQRRALYDRDLAMGLHLAFSARKTY 158


>ref|XP_002518039.1| Chaperone protein dnaJ 20, chloroplast precursor, putative [Ricinus
           communis] gi|223542635|gb|EEF44172.1| Chaperone protein
           dnaJ 20, chloroplast precursor, putative [Ricinus
           communis]
          Length = 201

 Score =  151 bits (381), Expect = 5e-34
 Identities = 78/123 (63%), Positives = 90/123 (73%)
 Frame = +3

Query: 255 THHQKSPTLIQNQVSSSKYTRFRTKATVNDQVMVTESEARMSFYELLGISESGSYSDIKH 434
           T  +  P L    V+    + F+TKA V+D++   +    +SFYELLGI ESGS  DIK 
Sbjct: 30  TKSKPGPFLRLKPVTRFPMSSFKTKAAVSDRIATKD----LSFYELLGIPESGSLIDIKQ 85

Query: 435 AYKQLARKYHPDVSPPERTEEYTKRFILVQEAYETLSDPSRRAMYDHDMARGLHLAFSAR 614
           AYKQLARKYHPDVSPP+R  EYT+RFI VQEAYETLSDP RRA YD DMARGLHLAFSAR
Sbjct: 86  AYKQLARKYHPDVSPPDRVHEYTQRFIQVQEAYETLSDPRRRATYDRDMARGLHLAFSAR 145

Query: 615 KAY 623
           + Y
Sbjct: 146 RRY 148


>ref|XP_002328862.1| predicted protein [Populus trichocarpa] gi|222839292|gb|EEE77629.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score =  147 bits (372), Expect = 5e-33
 Identities = 76/118 (64%), Positives = 89/118 (75%)
 Frame = +3

Query: 270 SPTLIQNQVSSSKYTRFRTKATVNDQVMVTESEARMSFYELLGISESGSYSDIKHAYKQL 449
           +P L    VS      F+TKAT+N +V     +  MSFYELLGI+ESG+  +IK AYKQL
Sbjct: 26  NPILRVKTVSRIPIGSFKTKATINAKVGAELGQ--MSFYELLGITESGTLPEIKQAYKQL 83

Query: 450 ARKYHPDVSPPERTEEYTKRFILVQEAYETLSDPSRRAMYDHDMARGLHLAFSARKAY 623
           ARKYHPDVSPP+R EEYT+RFI VQEAYETLSDP  R +YD DMA+GLHLAFSAR+ Y
Sbjct: 84  ARKYHPDVSPPDRVEEYTRRFIRVQEAYETLSDPRMREIYDRDMAKGLHLAFSARRRY 141


>gb|ABK95188.1| unknown [Populus trichocarpa]
          Length = 196

 Score =  147 bits (372), Expect = 5e-33
 Identities = 76/118 (64%), Positives = 89/118 (75%)
 Frame = +3

Query: 270 SPTLIQNQVSSSKYTRFRTKATVNDQVMVTESEARMSFYELLGISESGSYSDIKHAYKQL 449
           +P L    VS      F+TKAT+N +V     +  MSFYELLGI+ESG+  +IK AYKQL
Sbjct: 26  NPILRVKTVSRIPIGSFKTKATINAKVGAELGQ--MSFYELLGITESGTLPEIKQAYKQL 83

Query: 450 ARKYHPDVSPPERTEEYTKRFILVQEAYETLSDPSRRAMYDHDMARGLHLAFSARKAY 623
           ARKYHPDVSPP+R EEYT+RFI VQEAYETLSDP  R +YD DMA+GLHLAFSAR+ Y
Sbjct: 84  ARKYHPDVSPPDRVEEYTRRFIRVQEAYETLSDPRMREIYDRDMAKGLHLAFSARRRY 141


>ref|XP_002300151.1| predicted protein [Populus trichocarpa] gi|118487270|gb|ABK95463.1|
           unknown [Populus trichocarpa]
           gi|222847409|gb|EEE84956.1| predicted protein [Populus
           trichocarpa]
          Length = 197

 Score =  143 bits (361), Expect = 1e-31
 Identities = 72/120 (60%), Positives = 88/120 (73%)
 Frame = +3

Query: 264 QKSPTLIQNQVSSSKYTRFRTKATVNDQVMVTESEARMSFYELLGISESGSYSDIKHAYK 443
           + SP L    V+      F+TK T+N ++  T    +M+ Y+LLGI ESG++ +IK AYK
Sbjct: 24  ESSPILRFKPVTRIPIGSFKTKTTINAKI--TTELGQMTLYQLLGIPESGTFPEIKQAYK 81

Query: 444 QLARKYHPDVSPPERTEEYTKRFILVQEAYETLSDPSRRAMYDHDMARGLHLAFSARKAY 623
           QLARKYHPDVSPP R EEYT+RFI VQEAYETLSDP  + +YD DMARGLHLAFSAR+ Y
Sbjct: 82  QLARKYHPDVSPPGRVEEYTRRFIRVQEAYETLSDPRMKEIYDRDMARGLHLAFSARRRY 141


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